Structure of 1060804-53-6
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The BI-3802 was designed by Boehringer Ingelheim and could be obtained free of charge through the Boehringer Ingelheim open innovation portal opnMe.com, associated with its negative control.
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CAS No. : | 1060804-53-6 |
Formula : | C6H4ClNO2 |
M.W : | 157.55 |
SMILES Code : | O=CC1=C(O)C=NC(Cl)=C1 |
MDL No. : | MFCD13189121 |
InChI Key : | HZSDMQCOOUNXRC-UHFFFAOYSA-N |
Pubchem ID : | 56956219 |
GHS Pictogram: |
![]() |
Signal Word: | Warning |
Hazard Statements: | H302-H315-H319-H332-H335 |
Precautionary Statements: | P261-P280-P305+P351+P338 |
Num. heavy atoms | 10 |
Num. arom. heavy atoms | 6 |
Fraction Csp3 | 0.0 |
Num. rotatable bonds | 1 |
Num. H-bond acceptors | 3.0 |
Num. H-bond donors | 1.0 |
Molar Refractivity | 36.66 |
TPSA ? Topological Polar Surface Area: Calculated from |
50.19 Ų |
Log Po/w (iLOGP)? iLOGP: in-house physics-based method implemented from |
0.9 |
Log Po/w (XLOGP3)? XLOGP3: Atomistic and knowledge-based method calculated by |
1.47 |
Log Po/w (WLOGP)? WLOGP: Atomistic method implemented from |
1.25 |
Log Po/w (MLOGP)? MLOGP: Topological method implemented from |
-0.22 |
Log Po/w (SILICOS-IT)? SILICOS-IT: Hybrid fragmental/topological method calculated by |
1.67 |
Consensus Log Po/w? Consensus Log Po/w: Average of all five predictions |
1.01 |
Log S (ESOL):? ESOL: Topological method implemented from |
-2.12 |
Solubility | 1.19 mg/ml ; 0.00757 mol/l |
Class? Solubility class: Log S scale |
Soluble |
Log S (Ali)? Ali: Topological method implemented from |
-2.13 |
Solubility | 1.17 mg/ml ; 0.0074 mol/l |
Class? Solubility class: Log S scale |
Soluble |
Log S (SILICOS-IT)? SILICOS-IT: Fragmental method calculated by |
-2.0 |
Solubility | 1.57 mg/ml ; 0.00998 mol/l |
Class? Solubility class: Log S scale |
Soluble |
GI absorption? Gatrointestinal absorption: according to the white of the BOILED-Egg |
High |
BBB permeant? BBB permeation: according to the yolk of the BOILED-Egg |
Yes |
P-gp substrate? P-glycoprotein substrate: SVM model built on 1033 molecules (training set) |
No |
CYP1A2 inhibitor? Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set) |
No |
CYP2C19 inhibitor? Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set) |
No |
CYP2C9 inhibitor? Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set) |
No |
CYP2D6 inhibitor? Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set) |
No |
CYP3A4 inhibitor? Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set) |
No |
Log Kp (skin permeation)? Skin permeation: QSPR model implemented from |
-6.22 cm/s |
Lipinski? Lipinski (Pfizer) filter: implemented from |
0.0 |
Ghose? Ghose filter: implemented from |
None |
Veber? Veber (GSK) filter: implemented from |
0.0 |
Egan? Egan (Pharmacia) filter: implemented from |
0.0 |
Muegge? Muegge (Bayer) filter: implemented from |
1.0 |
Bioavailability Score? Abbott Bioavailability Score: Probability of F > 10% in rat |
0.55 |
PAINS? Pan Assay Interference Structures: implemented from |
0.0 alert |
Brenk? Structural Alert: implemented from |
2.0 alert: heavy_metal |
Leadlikeness? Leadlikeness: implemented from |
No; 1 violation:MW<1.0 |
Synthetic accessibility? Synthetic accessibility score: from 1 (very easy) to 10 (very difficult) |
1.51 |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
90% | With triethylamine; In dichloromethane; at 20℃; | 100 mL of CH2Cl2 was put into the compound 2-chloro-5-hydroxy-pyridine-4-carbaldehyde (13.7 g, 87 mmol) and agitated, and triethylamine (13.3 g, 130.5 mmol), and trifluoroacetic anhydride (25.8 g, 130.5 mmol) were slowly dropped thereto. The mixture was agitated at normal temperature for 2 hours, water and CH2Cl2 were added to separate the organic layer, and the organic extract was dried over magnesium sulfate and concentrated under the vacuum. It was purified with CH2Cl2/EtOH to prepare the compound C-26 (22.7 g, yield 90%). MS [M+H]+=289 |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
To a solution of aldehyde 21 a (4.4 g, 27.9 mmol, Anichem) in isopropyl alcohol (180 mL) is added hydroxylamine hydrochloride (5.8 g, 83.8 mmol). The solution is heated to reflux for 1 h, then cooled to RT and the solvent is removed in vacuo. The residue is diluted with EtOAc, washed with sodium bicarbonate solution and dried (Na2S04) to obtain the corresponding oxime. Cyanuric chloride (9.1 g, 49.3 mmol) is added portionwise to DMF (40 mL) at 0C while maintaining the temperature below 25C until cyanuric chloride completely consumed (~1 h). The obtained oxime is added to the solution of DMF at the same temperature and stirred for 1 h. The reaction mixture is quenched by adding water, extracted with EtOAc and washed with NaHC03 solution and brine. The organic layer is dried (Na2S04) and concentrated to give cyanide 21 b. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
6 g | With hydrogenchloride; In tetrahydrofuran; water; at 60℃; for 1h; | A solution of 2-chloro- 5-(methoxymethoxy)pyridine-4-carbaldehyde ( 12 g, 59.52 mmol, 1.00 equiv) in tetrahydrofuran (80 mL) and 3M HCl (130 mL) was stirred for 1 h at 60C. The reaction mixture was cooled to rt and the pH value of the solution was adjusted to 7 with 5% aqueous sodium carbonate solution. The organic layer was collected and the aqueous layer was extracted with 400 mL of ethyl acetate. The combined organic layers were dried over anhydrous sodium sulfate, filtered and concentrated under vacuum. The residue was purified on a silica gel column eluted with ethyl acetate/petroleum ether (1 :3) to give 6 g (64%) of 2-chloro-5-hydroxypyridine-4-carbaldehyde as a light yellow solid. TLC: petroleum ether: ethyl acetate=2:1 , Rf = 0.3. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
66% | With potassium carbonate; In N,N-dimethyl-formamide; at 50℃; for 2h; | A solution of <strong>[1060804-53-6]2-chloro-5-hydroxypyridine-4-carbaldehyde</strong> (5.7 g, 36. 18 mmol, 1.00 equiv), methyl 2-bromoacetate (7.8 g, 50.99 mmol, 1 .41 equiv) and potassium carbonate (6.5 g) in DMF (100 mL) was stirred for 2 h at 50C The resulting solution was diluted with 400 mL of ethyl acetate and washed with 2x200 mL of FL . The organic layer was dried over anhydrous sodium sulfate and concentrated under vacuum. The residue was purified on a silica gel column eluted with ethyl acetate/petroleum ether ( 1 :3) to yield 5.5 g (66%) of methyl 2-[(6-chloro-4-formylpyridin-3-yl)oxy]acetate as a light yellow solid. TLC: petroleum ethe ethyl acetate=2: 1 , Rf = 0.3. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
79% | With potassium carbonate; In N,N-dimethyl-formamide; at 80℃; for 8h; | j00489j To a mixture of <strong>[1060804-53-6]2-chloro-5-hydroxyisonicotinaldehyde</strong> (4.0 g, 25 mmol) and methyl 2- bromoacetate (5.8 g, 38 mmol) in N,N-dimethylformamide (40 mL) under nitrogen at room temperature was added potassium carbonate (6.9 g, 50 mmol). The reaction mixture was stirred at 80 C for 8 hours, then diluted with water (100 mL) and extracted with ethyl acetate (3 x 100 mL). The combined organic layers were washed with brine (2 x 100 mL), dried over anhydrous sodium sulfate and concentrated in vacuo. The residue was purified by silica gel silica gel chromatography [petroleum ether: ethyl acetate = 25:11 to give compound B-109 (4.2 g, 79% yield) as a white solid. LCMS (E): tR=0.68 mm., 212.6 mlz (M+1). |
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