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Chemical Structure| 20781-20-8 Chemical Structure| 20781-20-8

Structure of 20781-20-8

Chemical Structure| 20781-20-8

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Product Details of [ 20781-20-8 ]

CAS No. :20781-20-8
Formula : C9H13NO2
M.W : 167.21
SMILES Code : NCC1=CC=C(OC)C=C1OC
MDL No. :MFCD00052393
InChI Key :QOWBXWFYRXSBAS-UHFFFAOYSA-N
Pubchem ID :597250

Safety of [ 20781-20-8 ]

GHS Pictogram:
Signal Word:Danger
Hazard Statements:H314
Precautionary Statements:P501-P264-P280-P303+P361+P353-P301+P330+P331-P363-P304+P340+P310-P305+P351+P338+P310-P405
Class:8
UN#:2735
Packing Group:

Computational Chemistry of [ 20781-20-8 ] Show Less

Physicochemical Properties

Num. heavy atoms 12
Num. arom. heavy atoms 6
Fraction Csp3 0.33
Num. rotatable bonds 3
Num. H-bond acceptors 3.0
Num. H-bond donors 1.0
Molar Refractivity 47.1
TPSA ?

Topological Polar Surface Area: Calculated from
Ertl P. et al. 2000 J. Med. Chem.

44.48 Ų

Lipophilicity

Log Po/w (iLOGP)?

iLOGP: in-house physics-based method implemented from
Daina A et al. 2014 J. Chem. Inf. Model.

2.0
Log Po/w (XLOGP3)?

XLOGP3: Atomistic and knowledge-based method calculated by
XLOGP program, version 3.2.2, courtesy of CCBG, Shanghai Institute of Organic Chemistry

1.25
Log Po/w (WLOGP)?

WLOGP: Atomistic method implemented from
Wildman SA and Crippen GM. 1999 J. Chem. Inf. Model.

1.01
Log Po/w (MLOGP)?

MLOGP: Topological method implemented from
Moriguchi I. et al. 1992 Chem. Pharm. Bull.
Moriguchi I. et al. 1994 Chem. Pharm. Bull.
Lipinski PA. et al. 2001 Adv. Drug. Deliv. Rev.

0.92
Log Po/w (SILICOS-IT)?

SILICOS-IT: Hybrid fragmental/topological method calculated by
FILTER-IT program, version 1.0.2, courtesy of SILICOS-IT, http://www.silicos-it.com

1.44
Consensus Log Po/w?

Consensus Log Po/w: Average of all five predictions

1.32

Water Solubility

Log S (ESOL):?

ESOL: Topological method implemented from
Delaney JS. 2004 J. Chem. Inf. Model.

-1.84
Solubility 2.44 mg/ml ; 0.0146 mol/l
Class?

Solubility class: Log S scale
Insoluble < -10 < Poorly < -6 < Moderately < -4 < Soluble < -2 Very < 0 < Highly

Very soluble
Log S (Ali)?

Ali: Topological method implemented from
Ali J. et al. 2012 J. Chem. Inf. Model.

-1.78
Solubility 2.76 mg/ml ; 0.0165 mol/l
Class?

Solubility class: Log S scale
Insoluble < -10 < Poorly < -6 < Moderately < -4 < Soluble < -2 Very < 0 < Highly

Very soluble
Log S (SILICOS-IT)?

SILICOS-IT: Fragmental method calculated by
FILTER-IT program, version 1.0.2, courtesy of SILICOS-IT, http://www.silicos-it.com

-2.69
Solubility 0.341 mg/ml ; 0.00204 mol/l
Class?

Solubility class: Log S scale
Insoluble < -10 < Poorly < -6 < Moderately < -4 < Soluble < -2 Very < 0 < Highly

Soluble

Pharmacokinetics

GI absorption?

Gatrointestinal absorption: according to the white of the BOILED-Egg

High
BBB permeant?

BBB permeation: according to the yolk of the BOILED-Egg

Yes
P-gp substrate?

P-glycoprotein substrate: SVM model built on 1033 molecules (training set)
and tested on 415 molecules (test set)
10-fold CV: ACC=0.72 / AUC=0.77
External: ACC=0.88 / AUC=0.94

No
CYP1A2 inhibitor?

Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set)
and tested on 3000 molecules (test set)
10-fold CV: ACC=0.83 / AUC=0.90
External: ACC=0.84 / AUC=0.91

No
CYP2C19 inhibitor?

Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set)
and tested on 3000 molecules (test set)
10-fold CV: ACC=0.80 / AUC=0.86
External: ACC=0.80 / AUC=0.87

No
CYP2C9 inhibitor?

Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set)
and tested on 2075 molecules (test set)
10-fold CV: ACC=0.78 / AUC=0.85
External: ACC=0.71 / AUC=0.81

No
CYP2D6 inhibitor?

Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set)
and tested on 1068 molecules (test set)
10-fold CV: ACC=0.79 / AUC=0.85
External: ACC=0.81 / AUC=0.87

No
CYP3A4 inhibitor?

Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set)
and tested on 2579 molecules (test set)
10-fold CV: ACC=0.77 / AUC=0.85
External: ACC=0.78 / AUC=0.86

No
Log Kp (skin permeation)?

Skin permeation: QSPR model implemented from
Potts RO and Guy RH. 1992 Pharm. Res.

-6.43 cm/s

Druglikeness

Lipinski?

Lipinski (Pfizer) filter: implemented from
Lipinski CA. et al. 2001 Adv. Drug Deliv. Rev.
MW ≤ 500
MLOGP ≤ 4.15
N or O ≤ 10
NH or OH ≤ 5

0.0
Ghose?

Ghose filter: implemented from
Ghose AK. et al. 1999 J. Comb. Chem.
160 ≤ MW ≤ 480
-0.4 ≤ WLOGP ≤ 5.6
40 ≤ MR ≤ 130
20 ≤ atoms ≤ 70

None
Veber?

Veber (GSK) filter: implemented from
Veber DF. et al. 2002 J. Med. Chem.
Rotatable bonds ≤ 10
TPSA ≤ 140

0.0
Egan?

Egan (Pharmacia) filter: implemented from
Egan WJ. et al. 2000 J. Med. Chem.
WLOGP ≤ 5.88
TPSA ≤ 131.6

0.0
Muegge?

Muegge (Bayer) filter: implemented from
Muegge I. et al. 2001 J. Med. Chem.
200 ≤ MW ≤ 600
-2 ≤ XLOGP ≤ 5
TPSA ≤ 150
Num. rings ≤ 7
Num. carbon > 4
Num. heteroatoms > 1
Num. rotatable bonds ≤ 15
H-bond acc. ≤ 10
H-bond don. ≤ 5

1.0
Bioavailability Score?

Abbott Bioavailability Score: Probability of F > 10% in rat
implemented from
Martin YC. 2005 J. Med. Chem.

0.55

Medicinal Chemistry

PAINS?

Pan Assay Interference Structures: implemented from
Baell JB. & Holloway GA. 2010 J. Med. Chem.

0.0 alert
Brenk?

Structural Alert: implemented from
Brenk R. et al. 2008 ChemMedChem

0.0 alert: heavy_metal
Leadlikeness?

Leadlikeness: implemented from
Teague SJ. 1999 Angew. Chem. Int. Ed.
250 ≤ MW ≤ 350
XLOGP ≤ 3.5
Num. rotatable bonds ≤ 7

No; 1 violation:MW<1.0
Synthetic accessibility?

Synthetic accessibility score: from 1 (very easy) to 10 (very difficult)
based on 1024 fragmental contributions (FP2) modulated by size and complexity penaties,
trained on 12'782'590 molecules and tested on 40 external molecules (r2 = 0.94)

1.28

Application In Synthesis of [ 20781-20-8 ]

* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.

  • Downstream synthetic route of [ 20781-20-8 ]

[ 20781-20-8 ] Synthesis Path-Downstream   1~29

  • 1
  • [ 5926-51-2 ]
  • [ 20781-20-8 ]
  • [ 541-59-3 ]
YieldReaction ConditionsOperation in experiment
In acetic acid; Scheme C-6 illustrates the synthesis of the maleimide pyrazole scaffold C-63 wherein R4 is hydrogen. The synthesis starts with the condensation reaction of <strong>[5926-51-2]bromomaleic anhydride</strong> B77 with 2,4-dimethoxybenzylamine in acetic acid and acetic anhydride, giving rise to intermediate B78.
In acetic acid; Scheme C-6 illustrates the synthesis of the maleimide pyrazole scaffold C-63 wherein R4 is hydrogen. The synthesis starts with the condensation reaction of <strong>[5926-51-2]bromomaleic anhydride</strong> B77 with 2,4-dimethoxybenzylamine in acetic acid and acetic anhydride, giving rise to intermediate B78.
  • 2
  • [ 20781-20-8 ]
  • [ 51997-51-4 ]
  • 1-(9H-carbazol-4-yloxy)-3-[(2,4-dimethoxybenzyl)-amino]propan-2-ol [ No CAS ]
YieldReaction ConditionsOperation in experiment
94.2% In ipa; ethyl acetate; for 4.5h;Heating / reflux; To a stirred solution of Epoxy carbazole (5gm, 0.0209 mole) in IPA (20 ml), 2,4-dimethoxybenzylamine (9.42 ml, 0.06276 moles) was added, and the reaction mixture was heated to reflux for 3 hours. Subsequently the reaction mixture was cooled and IPA was stripped off. To the semisolid residue obtained, ethyl acetate (50 ml) was added and it was refluxed for 1.5 hours, until everything dissolved. A light yellow colored clear solution was finally obtained, which was stirred at room temperature for 5 hours when it completely crystallized out as a white solid (8 g, 94.2%), m.p: 152-154 0C, 1H NMR (400 MHz, CDCl3): delta 2.89(m IH), 2.99(d IH), 3.74(s 3H), 3.78(s 3H), 3.8 l(d 2H), 4.27(m, 3H)5 6.42(m 2H), 6.65(d IH), 7.08(d IH), 7.14(m 2H), 7.29(m IH), 7.35(d IH), 7.43(d IH), 8.22(d IH), 9.42(s IH); m/zM+1406.
  • 3
  • [ 20781-20-8 ]
  • [ 51997-51-4 ]
  • (2R)-1-(9H-carbazol-4-yloxy)-3-[(2,4-dimethoxybenzyl)-amino]propan-2-ol [ No CAS ]
  • (2S)-1-(9H-carbazol-4-yloxy)-3-[(2,4-dimethoxybenzyl)-amino]propan-2-ol [ No CAS ]
YieldReaction ConditionsOperation in experiment
In isopropyl alcohol; for 3h;Heating / reflux; Step 2: Preparation of 1-(9H-carbazol-4-yloxy)-3-[(2,4-dimethoxybenzyl)amino]propan-2-ol To a stirred solution of Epoxy carbazole (5 gm, 0.0209 mole) in IPA (20 ml), 2,4-dimethoxybenzylamine (9.42 ml, 0.06276 moles) was added, and the reaction mixture was heated to reflux for 3 hours. Subsequently the reaction mixture was cooled and IPA was stripped off. To the semisolid residue obtained, ethyl acetate (50 ml) was added and it was refluxed for 1.5 hours, until everything dissolved. A light yellow colored clear solution was finally obtained, which was stirred at room temperature for 5 hours when it completely crystallized out as a white solid (8 g, 94.2%), m.p: 152-154 C., 1H NMR (400 MHz, CDCl3): delta 2.89(m 1H), 2.99(d 1H), 3.74(s 3H), 3.78(s 3H), 3.81(d 2H), 4.27(m, 3H), 6.42(m 2H), 6.65(d 1H), 7.08(d 1H), 7.14(m 2H), 7.29(m 1H), 7.35(d 1H), 7.43(d 1H), 8.22(d 1H), 9.42(s 1H); m/zM+1 406.
  • 4
  • [ 20781-20-8 ]
  • [ 1885-81-0 ]
  • [ 10165-86-3 ]
  • [ 501-52-0 ]
  • [ 947756-65-2 ]
YieldReaction ConditionsOperation in experiment
In trifluoroethanol; at 20℃; for 4h; Step A: Methyl 6-{2-[(4-chlorophenyl)amino]-1-[(2,4-dimethoxybenzyl)(3-phenylpropanoyl)-amino]-2-oxoethyl}nicotinate Dihydrocinnamic acid (46 mg, 0.30 mmol), 4-chlorophenylisocyanide (42 mg, 0.30 mmol) and 2,4-dimethoxybenzylamine (61 mg, 0.36 mmol) were added to a solution of methyl 6-formylnicotinate (see Langlois, Y. et al, Tetrahedron. 1975, 31, 419-22) (50 mg, 0.30 mmol) in 400 muL of TFE. The solution was allowed to stir for 4 h at room temperature and then purified by flash chromatography (12-100percent ethyl acetate in hexanes to give the desired product. MS cal'd 602 (MH+), exp 602 (MH+).
  • 5
  • [ 20781-20-8 ]
  • [ 133446-99-8 ]
  • [ 1214900-77-2 ]
YieldReaction ConditionsOperation in experiment
With potassium carbonate; In N,N-dimethyl-formamide; at 20℃; To a solution of the above product in 40 ml DMF at rt was added 2,4- dimethoxybenzyl amine (2.7 ml, 17.98 mmol, 1.2 eq.), potassium carbonate (4.1 g, 30.12 mmol, 2 eq.) and the mixture stirred overnight at rt. It was diluted with ethyl acetate, washed 2x with water, 1 N HCI, brine, dried over MgSO4, filtered, concentrated and purified by chromatography using 5% ethyl acetate in dichloromethane to provide 2.43 g of P29.
  • 6
  • [ 149057-19-2 ]
  • [ 20781-20-8 ]
  • [ 1311150-53-4 ]
  • 7
  • [ 20781-20-8 ]
  • [ 1204-06-4 ]
  • [ 1610703-55-3 ]
YieldReaction ConditionsOperation in experiment
48% General procedure: To a solution of the acid derivative (1mmol) in CH2Cl2 were added triethylamine (2mmol) and ethyl chloroformate (1mmol), followed by stirring at 0C for 30min. After addition of the appropriate amine derivative (1.2mmol), the mixture was stirred for an additional 1h at 0C. Then, the reaction mixture was warmed to room temperature and stirred overnight. After the solvent was evaporated under reduced pressure, acetone was added, filtered, and evaporated. The residue was dissolved in CH2Cl2, and the organic phase was washed with a 1% NaHCO3 solution and brine, dried over Na2SO4, and evaporated under vacuum. The final residue was purified by flash column chromatography (Combiflash Rf) using CH2Cl2-MeOH (0-5%) as eluents. 4.3.9 (E)-N-(2,4-Dimethoxybenzyl)-3-(1H-indol-3-yl)acrylamide 3i Yield 48%, mp 164-166 C; IR (FTIR/FTNIR-ATR): 1644 cm-1 (C=O), 3241 cm-1 (N-H). 1H NMR (DMSO-d6) delta: 11.54 (1H, s), 8.07 (1H, t, J = 6 Hz), 7.92 (1H, d, J = 8 Hz), 7.74 (1H, s), 7.61 (1H, d, J = 15.6 Hz), 7.45 (1H, d, J = 7.6 Hz), 7.18 (3H, m), 6.71 (1H, d, J = 16 Hz), 6.57 (1H, s), 6.50 (1H, d, J = 8 Hz), 4.28 (2H, d, J = 5.6 Hz), 3.81 (3H, s), 3.74 (3H, s). 13C NMR (DMSO-d6) delta: 166.9, 160.4, 158.4, 138.0, 133.6, 131.0, 129.8, 125.5, 122.8, 120.9, 120.7, 119.8, 116.9, 112.9, 112.8, 104.9, 98.8, 56.0, 55.8, 37.7; HRMS C20H21N2O3 [M+H]+ Calcd 337.1552, Found m/z 337.1539.
  • 8
  • [ 20781-20-8 ]
  • 2-(((tert-butyldimethylsilyl)oxy)methyl)-3-tosyl-7,8,9,10-tetrahydrocyclohepta[e]indol-6(3H)-one [ No CAS ]
  • [ 1186-73-8 ]
  • methyl 2-(((tert-butyldimethylsilyl)oxy)methyl)-10-(2,4-dimethoxybenzyl)-7-hydroxy-9-oxo-1-tosyl-1,4,5,6,9,10-hexahydropyrido[2’,3’:3,4]cyclohepta[1,2-e]indole-8-carboxylate [ No CAS ]
YieldReaction ConditionsOperation in experiment
52% To a solution of 2-(((tert-butyldimethylsilyl)oxy)methyl)-3-tosyl-7,8,9,10- tetrahydrocyclohepta[e]indol-6(3H)-one (650 mg, 1.3 mmol) in CH2C12 (6 mL) was added 2- ,4-dimethoxybenzylamine (0.22 mL, 1.43 mmol) and triethylamine (0.54 mL, 3.9 mmol). The mixture was cooled to 0 C. To the mixture was added a TiCl4 solution (1 M CH2C12, 0.85 mL, 0.85 mmol) dropwise via syringe over 5 min. The mixture was allowed to warm to room temperature and was stirred overnight. The excess reagent was quenched with aqueous saturated NaHC03 (3 mL). The organic phase was separated with vigorous shaking using a PTFE phase separator, dried over Na2S04, filtered, and concentrated. The residue was combined with <strong>[1186-73-8]trimethyl methanetricarboxylate</strong> (342 mg, 1.8 mmol) in Ph20 (2.6 mL). The mixture was placed in a pre-heated aluminum block at 230 C and stirred for 15 minutes. The reaction vessel was removed from the heating block and allowed to cool to room temperature. The crude reaction mixture was loaded directly onto a silica gel column, eluting with 0-60% EtOAc in hexanes to yield a yellow powder (0.52 g, 52%). LC-MS: 773.4 [M+H]+, RT 1.97 min. 1H NMR (500 MHz, acetone- 6) delta ppm 0.18 (s, 6H), 0.98 (s, 9H), 1.34 (m, 1H), 1.92 (m, 1H), 2.01 (m, 1H), 2.26 (m, 1H), 2.39 (s, 3H), 2.90 (m, 2H), 3.38 (s, 3H), 3.68 (s, 3H), 3.90 (s, 3H), 4.96 (d, J=15.6 Hz, 2H), 5.17 (m, 2H), 6.16 (d, J=8.3 Hz, 1H), 6.30 (d, J=2.3 Hz, 1H), 6.61 (d, J=8.3 Hz, 1H), 6.91 (s, 1H), 7.25 (d, J=8.6 Hz, 1H), 7.43 (d, J=7.8 Hz, 2H), 7.94-8.00 (m, 3H), 13.79 (br. s, 1H).
  • 9
  • [ 20781-20-8 ]
  • 3-tosyl-7,8,9,10-tetrahydrocyclohepta[e]indol-6(3H)-one [ No CAS ]
  • [ 1186-73-8 ]
  • methyl 10-(2,4-dimethoxybenzyl)-7-hydroxy-9-oxo-1-tosyl-1,4,5,6,9,10-hexahydropyrido[2’,3‘:3,4]cyclohepta[1,2-e]indole-8-carboxylate [ No CAS ]
YieldReaction ConditionsOperation in experiment
49% To a solution of 3-tosyl-7,8,9,10-tetrahydrocyclohepta[e]indol-6(3H)-one (670 mg, 1.9 mmol) in CH2C12 (10 mL) was added 2-,4-dimethoxybenzylamine (0.32 mL, 2.1 mmol) and triethylamine (0.79 mL, 5.7 mmol). The mixture was cooled to 0 C. To the mixture was added a TiCl4 solution (1 M CH2C12, 1.24 mL, 1.24 mmol) dropwise via syringe over 5 min. The mixture was allowed to warm to room temperature and was stirred overnight. The excess reagent was quenched with aqueous saturated NaHC03 (5 mL). The organic phase was separated with vigorous shaking using a PTFE phase separator, dried over Na2S04, filtered, and concentrated. The residue was combined with <strong>[1186-73-8]trimethyl methanetricarboxylate</strong> (650 mg, 3.4 mmol) in Ph20 (3.8 mL). The mixture was placed in a pre-heated aluminum block at 220 C and stirred for 15 min. The reaction vessel was removed from the heating block and allowed to cool to room temperature. The crude reaction mixture was loaded directly onto a silica gel column, eluting with 0-100% EtOAc in hexanes to yield a yellow powder (0.58 g, 49%). LC-MS: 629.1 [M+H]+, RT 1.47 min. 1H NMR (500 MHz, acetone- 6) delta ppm 1.33 (m, 1H), 1.87-2.03 (m, 2H), 2.25 (m, 1H), 2.39 (s, 3H), 2.92 (m, 2H), 3.32 (s, 3H), 3.67 (s, 3H), 3.90 (s, 3H), 4.95 (d, J=15.6 Hz, 1H), 5.28 (d, J=15.2 Hz, 1H), 6.15 (m, 1H), 6.27 (m, 1H), 6.62 (d, J=8.2 Hz, 1H), 6.96 (m, 1H), 7.29 (d, J=8.2 Hz, 1H), 7.46 (m, 2H), 7.81 (d, J=8.6 Hz, 1H), 7.91 (d, J=3.8 Hz, 1H), 7.98 (m, 2H), 13.77 (br. s, 1H).
  • 10
  • [ 129790-37-0 ]
  • [ 20781-20-8 ]
  • [ 1186-73-8 ]
  • methyl 9-bromo-1-(2,4-dimethoxybenzyl)-4-hydroxy-2-oxo-1,2,5,6-tetrahydrobenzo[2,3]thiepino[4,5-b]pyridine-3-carboxylate [ No CAS ]
YieldReaction ConditionsOperation in experiment
64% Step 1: Methyl 9-bromo-l-(2,4-dimethoxybenzyl)-4-hydroxy-2-oxo-l,2,5,6-tetrahydrobenzo[2,3]thiepino[4,5-b]pyridine-3-carboxylate To a stirring solution of 8-bromo-3,4-dihydrobenzo[b]thiepin-5(2H)-one (Intermediate 9, Step 2, 36.2 g, 141 mmol), (2,4-dimethoxyphenyl)methanamine (25.9 g, 23.3 mL, 155 mmol), triethylamine (42.7 g, 58.7 mL, 423 mmol) in CH2C12(300 mL) at 0 C was added T1CI4(1M CH2C12, 71 mL, 71 mmol) dropwise. After the addition, the mixture was brought to room temperature and stirred overnight. The reaction was quenched with satd. NaHC03solution (3 mL) and the mixture was diluted with CH2C12(120 mL). The CH2C12layer was separated using a phase separator cartridge and the aqueous layer was extracted with CH2C12(2 x 30 mL). The combined organic phases were evaporated to dryness followed by the addition of <strong>[1186-73-8]trimethyl methanetricarboxylate</strong> (53.6 g, 282 mmol) and diphenyl ether (280 mL). The mixture was stirred at 230 C for 15 min., then cooled and chromato graphed (ethyl acetate in hexanes, 0-100 % gradient) to obtain the title compoundas a light brown solid (47.6 g, 64%). LC-MS: 532.0, 534.0 [M+H]+, RT 1.59 min.
  • 11
  • [ 20781-20-8 ]
  • 9-tosyl-3,4-dihydro-2H-thiepino[3,2-f]indol-5(9H)-one [ No CAS ]
  • [ 1186-73-8 ]
  • methyl 1-(2,4-dimethoxybenzyl)-4-hydroxy-2-oxo-9-tosyl-2,5,6,9-tetrahydro-1H-pyrido[2',3':4,5]thiepino[3,2-f]indole-3-carboxylate [ No CAS ]
YieldReaction ConditionsOperation in experiment
62% Step 1: Methyl l-(2,4-dimethoxybenzyl)-4-hydroxy-2-oxo-9-tosyl-2,5,6,9-tetrahydro- 1H-pyrido[2',3':4,5]thiepino[3,2-f]indole-3-carboxylate o a stirring solution of Intermediate 9 (1.02 g, 2.75 mmol), (2,4-dimethoxyphenyl)methanamine (0.51 g, 0.45 mL, 3.03 mmol), triethylamine (0.83 g, 1.14 mL, 8.25 mmol) in CH2C12(6.0 mL) at 0 C was added a solution of TiCl4(1M in CH2C12,1.4 mL, 1.4 mmol) dropwise. After the addition, the mixture was brought to roomtemperature and stirred overnight. The reaction was quenched with satd. NaHC03solution (3 mL) and the mixture was diluted with CH2C12(12 mL). The CH2C12layer was separated and the aqueous layer was extracted with CH2C12(2 x 3 mL). The combined organics were evaporated to dryness followed by the addition of <strong>[1186-73-8]trimethyl methanetricarboxylate</strong> (1.05 g,5.5 mmol) and diphenyl ether (5.0 mL). The mixture was stirred at 230 C for 10 min, then cooled to room temperature and loaded directly onto a silica gel column. The product was chromato graphed (ethyl acetate in CH2C120-50 %) to furnish the title compound as a light brown solid (1.10 g, 62%). LC-MS: 647.2 [M+H]+, RT 1.57 min.
  • 12
  • [ 5400-79-3 ]
  • [ 20781-20-8 ]
  • ethyl 3-(2,4-dimethoxybenzylamino)cyclopentanecarboxylate [ No CAS ]
YieldReaction ConditionsOperation in experiment
44% With sodium tris(acetoxy)borohydride; acetic acid; In tetrahydrofuran; at 0 - 20℃; for 14h; 2,4-dimethoxybenzyl amine (556 mg, 4.66 mmol, 1.0 eq.), sodium triacetoxyborohydride (446 mg, 3.32 mmol, 1.4 eq.) and acetic acid (200 mg, 3.32 mmol, 1.0 eq.) were added to a solution of <strong>[5400-79-3]ethyl 3-oxocyclopentanecarboxylate</strong> (520 mg, 3.32 mmol, 1.0 eq.) in tetrahydrofuran (5 mL) at 0 C. The reaction was stirred at room temperature for 14 hours, quenched with saturated NaHCO3 (10 mL). The aqueous phase was extracted with ethyl acetate (10 mL*2). The combined organic phases were dried over anhydrous sodium sulfate, and concentrated to give the crude product, which was purified by silica gel column chromatography (eluent: petroleum ether:ethyl acetate=1:1) to give the title compound (250 mg, yield: 44%).
  • 13
  • [ 20781-20-8 ]
  • [ 7579-20-6 ]
  • C15H17N3O3 [ No CAS ]
  • 14
  • [ 20781-20-8 ]
  • 2-methyl-5,6,7,8-tetrahydrocyclohepta[d]imidazol-4(1H)-one [ No CAS ]
  • [ 1186-73-8 ]
  • methyl 10-(2,4-dimethoxybenzyl)-7-hydroxy-2-methyl-9-oxo-3,4,5,6,9,10-hexahydroimidazo[4’,5’:6,7]cyclohepta[1,2-b]pyridine-8-carboxylate [ No CAS ]
YieldReaction ConditionsOperation in experiment
14% TiC14 (1.0 M in CH2C12, 6.44 mL, 6.44 mmol) was added to a solution of 2-methyl-5,6,7,8-tetrahydrocyclohepta[dlinildazol-4(1H)-one (Intermediate 3, step 2, 0.96 g, 5.85 mmol), (2,4- dimethoxyphenyl)methanamine (1.08 g, 6.44 mmol), triethylamine (3.19 g, 4.39 mL, 31.61mmol), and CH2C12 (10.0 mL) at 0 C. The mixture was stirred at 0 C for 0.5 h. The mixture was brought to room temperature and stirred overnight. The reaction was diluted with CH2C12 and quenched with saturated aqueous NaHCO3 The organic phase was separated using a phase separator cartridge. The aqueous layer was extracted with CH2C12. The organic layerswere combined and evaporated to dryness. The residue, <strong>[1186-73-8]trimethyl methanetricarboxylate</strong> (2.22 g, 11.7 mmol), and diphenyl ether (25 mL) were stirred at 200C for 10 mm. The mixture was cooled to room temperature and purified by silica gel column chromatography (0-20% MeOH in CH2C12) followed by reversed phase C18 chromatography, (0-50% acetonitrile in water) to afford the title compound (0.36 g, 14%).LC-MS 438.3 [M-Hf, RT 1.04 mm
  • 15
  • [ 20781-20-8 ]
  • 2-(((tert-butyldimethylsilyl)oxy)methyl)-1-ethyl-5,6,7,8-tetrahydrocyclohepta[d]imidazol-4(1H)-one [ No CAS ]
  • [ 1186-73-8 ]
  • methyl 2-(((tert-butyldimethylsilyl)oxy)methyl)-10-(2,4-dimethoxybenzyl)-3-ethyl-7-hydroxy-9-oxo-3,4,5,6,9,10-hexahydroimidazo[4',5':6,7]cyclohepta[1,2-b]pyridine-8-carboxylate [ No CAS ]
YieldReaction ConditionsOperation in experiment
40% To a solution of the product of step 1, triethylamine (324 mg, 0.45 mL, 3.21 mmol) and (2,4- dimethoxyphenyl)methanamine (195 mg, 0.18 mL, 1.17 mmol) in CH2CI2 at 0 C (2.5 mL), was added TiCl4 (0.64 mL, 1.0 M in CH2C12, 0.64 mmol). The mixture was stirred at 0 C for 15 min. The mixture was brought to room temperature and stirred overnight. The mixture was diluted with CH2CI2 and quenched at 0 C with saturated NaHCC>3 solution. The organic layer was separated using a phase separator cartridge, and the aqueous layer was washed with additional CH2CI2. The CH2CI2 solution was concentrated under reduced pressure. To the residue, diphenyl ether (5.0 mL) and <strong>[1186-73-8]trimethyl methanetricarboxylate</strong> (380 mg, 2.0 mmol) were added. The mixture was stirred at 200 C for 10 min and then cooled. The solvent was removed under reduced pressure, and the residue was purified by silica gel column chromatography (0-100% gradient EtOAc in CH2CI2) to afford the title compound as a yellow oil (200 mg, 40%). (2670) LC-MS 598.5 [M+H]+, RT 1.81 min
  • 16
  • [ 21279-62-9 ]
  • [ 20781-20-8 ]
  • 3-[(2,4-dimethoxybenzyl)amino]pyrazine-2-carboxamide [ No CAS ]
YieldReaction ConditionsOperation in experiment
66% With pyridine; In methanol; at 140℃; for 0.5h;Sealed tube; Microwave irradiation; General procedure: Compounds 1-6 were prepared according to conventional organic synthesis methods. 3-Chloropyrazine-2-carboxamide (1.27 mmol) was dissolved in THF (20 mL) in a round bottom flask and after that treated with two equivalents of the corresponding benzylamine and an equimolar amount of triethylamine. The reaction was conducted with continuous stirring and heating (70 C) under reflux in an oil bath for 15 h. Compounds 7-15 were synthesised using a microwave reactor with a focused field. 3-Chloropyrazine-2-carboxamide (1.27 mmol) was put into a thick-walled tube together with the corresponding benzylamine (2.54 mmol), pyridine (1.27 mmol), methanol (approx. 5 mL) and a magnetic stir bar and then sealed with a special cap. The reaction parameters were set according to the previously published paper as follows-140 C, 30 min, 200 W [29]. Reaction progress was checked by TLC (hexane:ethyl acetate-1:1). Regardless of the synthesis method used,all reaction mixtures were adsorbed on silica and subjected to preparative flash chromatography (hexane and ethyl acetate, gradient elution, detection wavelengths 260 nm and 280 nm). Products were recrystallized from ethanol or ethanol and water if necessary. All final substances were chemically characterized (1H-NMR, 13C-NMR, IR, melting point and elemental analysis).
  • 17
  • [ 20781-20-8 ]
  • [ 70049-46-6 ]
  • 2-chloro-N-(2,4-dimethoxybenzyl)-6-methoxyquinolin-4-amine [ No CAS ]
YieldReaction ConditionsOperation in experiment
With triethylamine; In dimethyl sulfoxide; at 90℃; for 48h; To a mixture of 2,4- dichloro-<strong>[70049-46-6]6-methoxyquinoline</strong> (6.0 g, 26.3 mmol) and (2,4-dimethoxyphenyl)methanamine (6.60 g, 39.5 mmol) in DMSO (80 ml) was added Et3N (11.00 ml, 79 mmol). The reaction mixture was stirred at 90 °C for 48 h. Then the reaction was cooled to 20 °C, and dilutedwith EtOAc (100 mL) and water (100 mL). The aqueous layer was extracted with EtOAc (3 x 100 mL). The combined organic layers were dried over Na2504, filtered and concentrated in vacuo. The resulting residue was purified by column chromatography (5i02, PE:EtOAc =10:1 to 1:1) to give the title compound.
  • 18
  • [ 50-00-0 ]
  • [ 1198-14-7 ]
  • [ 20781-20-8 ]
  • 5-bromo-7-(((2,4-dimethoxybenzyl)amino)methyl)quinolin-8-ol [ No CAS ]
YieldReaction ConditionsOperation in experiment
28% The solution of 2,4-dimethoxybenzylamine (248 mu, 0.276 g, 1.65 mmol) in ethanol (4 mL) was added 37percent formaldehyde (62 mu, 0.049 g, 1.65 mmol). The mixture was stirred for 1 hour. Then the solution of <strong>[1198-14-7]5-bromoquinolin-8-ol</strong> (0.336 g, 1.5 mmol) in ethanol (5 mL) was added to the reaction mixture. After that the mixture was refluxed at 50°C for 56 hours. The reaction mixture was allowed to cool down and the obtained precipitate was filtered off, washed with ethanol and crystallized from ethanol to give the titled compound (0.170 g, 28percent) as yellow crystals. Mp. 146-148 °C. 1 H NMR (300 MHz, CDCI3): delta 3.80-3.82 (d, 8H), 4.07(s, 2H), 6.44 (d, 2H), 7.08 (d, 1 H), 7.46-7.51 (m, 1 H), 7.62 (s, 1 H), 8.46 (d, 1 H), 8.89 (s, 1 H). 13C NMR (75 MHz, CDCI3): delta 47.7, 49.5, 55.2, 55.3, 98.6, 103.7, 109.1 , 118.8, 120.6, 122.1 , 127.0, 130.9, 131.0, 135.2, 140.0, 149.0, 153.1 , 158.7, 160.5. LCMS RT= 4.12 min. ESI+ m/z: 403.5 [M+H+].
  • 19
  • [ 20781-20-8 ]
  • [ 112811-71-9 ]
  • 1-cyclopropyl-7-(2,4-dimethoxybenzylamino)-6-fluoro-8-methoxy-1,4-dihydro-4-oxo-3-quinolinecarboxylate ethyl ester [ No CAS ]
YieldReaction ConditionsOperation in experiment
In dimethyl sulfoxide; N,N-dimethyl-formamide; at 120℃; for 6h; A three-necked flask was charged with 100 g of <strong>[112811-71-9]1-cyclopropyl-6,7-difluoro-8-methoxy-1,4-dihydro-4-oxo-3-quinolinecarboxylate ethyl ester</strong>,Then add 600mL DMF: DMS0 = 1: 1 mixed solvent, stirred, was added 2,4-dimethoxybenzylamine 54mL, heated to 120 C for 6h, cooled,The reaction solution was poured into 1mol / L dilute hydrochloric acid, stirred, added 500mLEA extraction, the organic layer was separated, the aqueous phase was extracted with EA300mLX2,The combined organic layers were dried and evaporated to dryness to give 92.3 g of the yellow product which was used in the next step without further purification.
  • 20
  • [ 13726-16-4 ]
  • [ 20781-20-8 ]
  • C17H18ClNO3 [ No CAS ]
YieldReaction ConditionsOperation in experiment
In toluene; at 20 - 25℃; for 24h;Inert atmosphere; 5) 3-(tert-butyl)-N-(4-chloro-3-methoxybenzyl)-1-methyl-1H-pyrazole-5-carboxamide To a solution of aldehyde (200 mg, 1.17 mmol, 1.0 eq) in toluene (20 mL) was added 2,4-dimethoxybenzyl amine (215 mg, 1.29 mmol, 1.1 eq) and the reaction mixture was stirred at room temperature for 24 h. Toluene was removed to give a residue, which was taken in MeOH (30 mL) and then NaBH4 (87 mg, 2.34 mmol, 2.0 eq) was added slowly. The reaction mixture was stirred at room temperature for 6 h. Solvent was removed and the residue was extracted in Ethyl acetate and stirred with saturated aq NaHCO3 for 1 h. The organic layer was collected, dried and solvent was removed to give the crude amine, which was used in the next step without further purification. To a solution of the crude amine (1.17 mmol, 1.0 eq) in DMF (10 mL) was added the acid (234 mg, 1.29 mmol, 1.1 eq), DIEA (755 mg, 5.85 mmol, 5 eq) and HBTU (532 mg, 1.40 mmol, 1.2 eq) and the reaction mixture was stirred at rt for 12 h. The reaction mixture was then diluted with ethyl acetate (200 mL) and washed with 10percent aqHCl (1*50 mL), sat NaHCO3 (1*50 mL) and water (4*50 mL). Organic layer was collected, dried (MgSO4) and evaporated to give a crude product, which was purified by column chromatography (EtOAc/Hexane 25percent to 75percent)) to give the amide, which was directly used in the next step. The amide was treated with 95percent TFA:H2O for 12 h. TFA was removed and azeotroped with toluene to give a residue, which was purified by column chromatography (EtOAc/Hexane 10percent to 50percent) to give the desired product in 37percent (147 mg, >95percent purity). Mass Spectrum (LCMS, ESI Pos.) Calcd. For C17H23ClN3O2: 336.0 (M+H), Found 336.0.
  • 21
  • [ 20781-20-8 ]
  • [ 103438-86-4 ]
  • C16H16FNO3 [ No CAS ]
YieldReaction ConditionsOperation in experiment
In toluene; at 20 - 25℃; for 24h;Inert atmosphere; 10) 3-cyclopropyl-N-(3-(cyclopropylmethoxy)-2-fluorobenzyl)-1-methyl-1H-pyrazole-5-carboxamide To a solution of aldehyde (1.0 g, 7.14 mmol, 1.0 eq) in toluene (20 mL) was added 2,4-dimethoxybenzyl amine (1.2 g, 7.14 mmol, 1.0 eq) and the reaction mixture was stirred at room temperature for 24 h. Toluene was removed to give a residue, which was taken in MeOH (25 mL) and then NaBH4 (540 mg, 14.28 mmol, 2.0 eq) was added slowly. The reaction mixture was stirred at room temperature for 6 h. Solvent was removed and the residue was extracted in Ethyl acetate and stirred with saturated aq NaHCO3 for 1 h. The organic layer was collected, dried and solvent was removed to give the crude amine, which was used in the next step without further purification. To a solution of the crude amine (7.14 mmol, 1.0 eq) in DMF (10 mL) was added the acid (1.20 g, 7.14 mmol, 1.0 eq), DIEA (4.61 g, 35.72 mmol, 5 eq) and HBTU (3.25 g, 8.57 mmol, 1.2 eq) and the reaction mixture was stirred at rt for 12 h. The reaction mixture was then diluted with ethyl acetate (20 mL) and washed with 10% aqHCl (1*30 mL), sat NaHCO3 (1*30 mL) and water (4*30 mL). Organic layer was collected, dried (MgSO4) and evaporated to give a crude product, which was taken in 25 mL of methanol and NaOH (286 mg, 7.14 mmol, 1.0 eq) was added and stirred at room temperature for 24 h. Methanol was removed and the residue was neutralized with 10% aq HCl. The reaction mixture was then extracted with ethyl acetate (2*). Organic layer was collected, dried (MgSO4) and evaporated to give a crude product, which was purified by column chromatography (EtOAc/Hexane) to give the amide. To a solution of the hydroxy amide (360 m g, 0.82 mmol, 1.0 eq) in DMF (10 mL) was added Cs2CO3 (1.34 g, 615 mmol, 2.0 eq) and stirred at room temperature for 20 min. Then bromide (221 mg, 1.64 mmol, 2 eq) was added and stirred at rt for 24 h. The reaction mixture was then diluted with Ethyl acetate (25 mL) and washed with water (4*). Organic layer was collected, dried (MgSO4) and evaporated to give a residue, which was then treated with 95% TFA:H2O for 12 h. TFA was removed and azeotroped with toluene to give a residue, which was purified by column chromatography (EtOAc/Hexane 10% to 50%) to give the desired product (22 mg, >95% purity). Mass Spectrum (LCMS, ESI Pos.) Calcd. For C19H22CFN3O2: 344.0 (M+H), Found 344.0.
  • 22
  • [ 20781-20-8 ]
  • [ 66495-88-3 ]
  • C17H19NO4 [ No CAS ]
YieldReaction ConditionsOperation in experiment
In toluene; at 20 - 25℃; for 24h;Inert atmosphere; 39) N-(3-(cyclopentylmethoxy)-2-methoxybenzyl)-3-cyclopropyl-1-methyl-1H-pyrazole-5-carboxamide To a solution of aldehyde (10.0 g, 65.79 mmol, 1.0 eq) in toluene (100 mL) was added 2,4-dimethoxybenzyl amine (10.89 g, 65.79 mmol, 1.0 eq) and the reaction mixture was stirred at room temperature for 24 h. Toluene was removed to give a residue, which was taken in MeOH (100 mL) and then NaBH4 (4.97 g, 131.58 mmol, 2.0 eq) was added slowly. The reaction mixture was stirred at room temperature for 6 h. Solvent was removed and the residue was extracted in Ethyl acetate and stirred with saturated aq NaHCO3 for 1 h. The organic layer was collected, dried and solvent was removed to give the crude amine, which was used in the next step without further purification. To a solution of the crude amine (7.26 mmol, 1.0 eq) in DMF (20 mL) was added the acid (1.21 g, 7.26 mmol, 1.0 eq), DIEA (4.68 g, 36.30 mmol, 5 eq) and HBTU (3.30 g, 8.71 mmol, 1.2 eq) and the reaction mixture was stirred at rt for 12 h. The reaction mixture was then diluted with ethyl acetate (100 mL) and washed with 10% aq HCl (1*50 mL), sat NaHCO3 (1*50 mL) and water (4*50 mL). Organic layer was collected, dried (MgSO4) and evaporated to give a crude product, which was taken in 150 mL of methanol and NaOH (290 mg, 7.26 mmol, 1.0 eq) was added and stirred at room temperature for 24 h. Methanol was removed and the residue was neutralized with 10% aq HCl. The reaction mixture was then extracted with ethyl acetate (2*). Organic layer was collected, dried (MgSO4) and evaporated to give a crude product, which was purified by column chromatography (EtOAc/Hexane) to give the amide. To a solution of the hydroxy amide (500 mg, 1.07 mmol, 1.0 eq) in DMF (15 mL) was added Cs2CO3 (1.04 g, 3.21 mmol, 3.0 eq) and stirred at room temperature for 20 min. Then bromide (261 mg, 1.60 mmol, 1.5 eq) was added and stirred at rt for 24 h. The reaction mixture was then diluted with ethyl acetate (25 mL) and washed with water (4*). Organic layer was collected, dried (MgSO4) and evaporated to give a residue, which was then treated with 95% TFA:H2O for 12 h. TFA was removed and azeotroped with toluene to give a residue, which was purified by column chromatography (EtOAc/Hexane 10% to 50%) to give the desired product. Mass Spectrum (LCMS, ESI Pos.) Calcd. For C12H30N2O3: 384.0 (M+H), Found 362.0.
  • 23
  • [ 873975-41-8 ]
  • [ 50-00-0 ]
  • [ 20781-20-8 ]
  • [ 10601-99-7 ]
  • N-(2-((2-azidoethyl)amino)-2-oxoethyl)-N-(2,4-dimethoxybenzyl)-3-ethynylbenzamide [ No CAS ]
  • 24
  • [ 873975-41-8 ]
  • [ 20781-20-8 ]
  • [ 10601-99-7 ]
  • [ 67-64-1 ]
  • N-(1-((2-azidoethyl)amino)-2-methyl-1-oxopropan-2-yl)-N-(2,4-dimethoxybenzyl)-3-ethynylbenzamide [ No CAS ]
  • 25
  • [ 873975-41-8 ]
  • [ 20781-20-8 ]
  • [ 10601-99-7 ]
  • [ 78-84-2 ]
  • N-(1-((2-azidoethyl)amino)-3-methyl-1-oxobutan-2-yl)-N-(2,4-dimethoxybenzyl)-3-ethynylbenzamide [ No CAS ]
  • 26
  • [ 20781-20-8 ]
  • [ 10601-99-7 ]
  • 4,13-bis(2,4-dimethoxybenzyl)-1<SUP>1</SUP>H,10<SUP>1</SUP>H-4,7,13,16-tetraaza-1(4,1),10(1,4)-ditriazola-2,11(1,3)-dibenzenacyclooctadecaphane-3,6,12,15-tetraone [ No CAS ]
  • 27
  • [ 20781-20-8 ]
  • [ 10601-99-7 ]
  • 4,13-bis(2,4-dimethoxybenzyl)-5,14-diisopropyl-1<SUP>1</SUP>H,10<SUP>1</SUP>H-4,7,13,16-tetraaza-1(4,1),10(1,4)-ditriazola-2,11(1,3)-dibenzenacyclooctadecaphane-3,6,12,15-tetraone [ No CAS ]
  • 28
  • [ 573675-31-7 ]
  • [ 20781-20-8 ]
  • 7-bromo-N-(2,4-dimethoxybenzyl)pyrido[3,2-d]pyrimidin-4-amine [ No CAS ]
  • 29
  • [ 723280-98-6 ]
  • [ 20781-20-8 ]
  • 7-bromo-N-(2,4-dimethoxybenzyl)-3-nitroquinolin-4-amine [ No CAS ]
YieldReaction ConditionsOperation in experiment
100% at 20 - 120℃; for 3h; <strong>[723280-98-6]7-bromo-4-chloro-3-nitroquinoline</strong> (2.86 g, 10 mmol, 1 equiv.) was added to (2,4- dimethoxyphenyl) methanamine (100 mmol, 10 eq ) at 20 C. The mixture was stirred at 120 C for 3 hrs. The mixture was diluted with water (200 mL) and extracted with EtOAc (100 ml x 3). The organic layer was washed with brine (100 mL), dried over Na2S04, filtered and concentrated. The residue was purified by flash silica gel chromatography (Teledyne Isco, 10 g, SEPAFLASH silica flash column, eluent of 0 to about 50% ethyl acetate/petroleum ether gradient at 100 mL/min) to provide 7-bromo-N-(2,4-dimethoxybenzyl)-3-nitroquinolin- 4-amine (4.2 g, 10.0 mmol, 100%). LC/MS [M+H] 418.04/420.04 (calculated); LC/MS [M+H] 418.19/420.16 (observed).
 

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