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Chemical Structure| 109-54-6
Chemical Structure| 109-54-6
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Product Details of [ 109-54-6 ]

CAS No. :109-54-6 MDL No. :MFCD00044496
Formula : C5H12ClN Boiling Point : -
Linear Structure Formula :- InChI Key :NYYRRBOMNHUCLB-UHFFFAOYSA-N
M.W : 121.61 Pubchem ID :66960
Synonyms :

Calculated chemistry of [ 109-54-6 ]

Physicochemical Properties

Num. heavy atoms : 7
Num. arom. heavy atoms : 0
Fraction Csp3 : 1.0
Num. rotatable bonds : 3
Num. H-bond acceptors : 1.0
Num. H-bond donors : 0.0
Molar Refractivity : 33.84
TPSA : 3.24 Ų

Pharmacokinetics

GI absorption : Low
BBB permeant : No
P-gp substrate : No
CYP1A2 inhibitor : No
CYP2C19 inhibitor : No
CYP2C9 inhibitor : No
CYP2D6 inhibitor : No
CYP3A4 inhibitor : No
Log Kp (skin permeation) : -6.18 cm/s

Lipophilicity

Log Po/w (iLOGP) : 2.04
Log Po/w (XLOGP3) : 1.21
Log Po/w (WLOGP) : 1.18
Log Po/w (MLOGP) : 1.53
Log Po/w (SILICOS-IT) : 0.87
Consensus Log Po/w : 1.37

Druglikeness

Lipinski : 0.0
Ghose : None
Veber : 0.0
Egan : 0.0
Muegge : 2.0
Bioavailability Score : 0.55

Water Solubility

Log S (ESOL) : -1.16
Solubility : 8.45 mg/ml ; 0.0695 mol/l
Class : Very soluble
Log S (Ali) : -0.87
Solubility : 16.2 mg/ml ; 0.133 mol/l
Class : Very soluble
Log S (SILICOS-IT) : -1.77
Solubility : 2.05 mg/ml ; 0.0168 mol/l
Class : Soluble

Medicinal Chemistry

PAINS : 0.0 alert
Brenk : 1.0 alert
Leadlikeness : 1.0
Synthetic accessibility : 1.34

Safety of [ 109-54-6 ]

Signal Word:Warning Class:
Precautionary Statements:P422-P411-P280-P305+P351+P338 UN#:
Hazard Statements:H317-H319 Packing Group:
GHS Pictogram:

Application In Synthesis of [ 109-54-6 ]

* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.

  • Upstream synthesis route of [ 109-54-6 ]
  • Downstream synthetic route of [ 109-54-6 ]

[ 109-54-6 ] Synthesis Path-Upstream   1~26

  • 1
  • [ 109-54-6 ]
  • [ 86-39-5 ]
  • [ 28178-78-1 ]
Reference: [1] Patent: US2951082, 1956, ,
  • 2
  • [ 5407-04-5 ]
  • [ 109-54-6 ]
YieldReaction ConditionsOperation in experiment
91.07% With sodium hydroxide In water at 45℃; for 2 h; The flaky solid NaOH (42.1 g, 1052.5 mmol, 1.0 equiv.) was dissolved in 142.1 g of water, a large amount of heat was released to give an aqueous solution of NaOH, which was cooled to 30 ° C. A solution of CPA.HCl (104 g, 658 mol, 1.0 equiv.) and the above aqueous solution of NaOH was added to a 500 mL two-necked flask and the temperature was raised to 45 ° C and the reaction was started and stirred for 2 h.
Reaction post-treatment:
The reaction solution was cooled to room temperature (30 ° C). The organic layer was separated and collected, and 74.93 g of wet CPA was obtained. The water content was found to be 2.755percent and the yield was 91.07percent (excluding moisture in the CPA).
83% With triethylamine In diethyl ether at 20℃; A 250 mL three-necked flask was charged with 10.0 g of Intermediate V,100ml anhydrous ether, 12.8g triethylamine, reaction at room temperature,TLC monitored the reaction was complete. Add saturated sodium bicarbonate solution 100ml,Stirring, extracting with anhydrous ether, collecting the organic phase, washing with water, washing with salt,Drying over anhydrous sodium sulfate. Filtered and evaporated to remove the organic solvent under reduced pressure,The intermediate VI was obtained as a colorless oil 6.4 g, yield 83percent.
80% With sodium hydroxide In water at 45 - 50℃; for 2 h; Example 3
4-Dimethylamino- 1 -(5-[ 1 ,3]dioxolan-2-yl-furan-2-yl)- 1 -(4-fluoro-phenyl)-butan- 1 -ol (3)
In a 1 L round bottomed flask equipped with magnetic bar and condenser, a mixture of 3- (dimethylamino)propyl-l -chloride hydrochloride (DMPCHCl) (260 g, 1.65 mol) and aqueous NaOH solution (240 g, 30 percent w/v, 1.8mol, 1.1 eq.) was heated at 45-50 °C for 2 hours. The mixture was then extracted with ether (3 x 400 mL) and the collected organic phase was dried (solid NaOH) and filtered. Distillation of ether at atmospheric pressure afforded DMPC as a colourless oil (160 g, 80 percent).
75% With sodium hydrogencarbonate In diethyl ether; water at 20℃; for 1 h; A saturated solution of NaHCO3 (205 ml) was slowly added to a suspension of 3- chloro-W,N-dimethyl-l-propanamine hydrochloride (25 g, 0.158mol, CAS [4584-46-7]) in Et2O (200ml). The mixture was stirred at RT for lhour, then saturated with K2CO3 (solid). The mixture was extracted with Et2O. The organic layer was dried over MgSO4 and concentrated at RT under vacuum to afford 15.5g of 3-chloro-iV,iV-dimethyl-l- propanamine (yield 75percent) .

Reference: [1] Patent: CN105294496, 2016, A, . Location in patent: Paragraph 0128; 0129; 0130; 0131; 0132
[2] Patent: CN106810523, 2017, A, . Location in patent: Paragraph 0021
[3] Patent: WO2007/54105, 2007, A2, . Location in patent: Page/Page column 20
[4] Journal of the Chemical Society, Perkin Transactions 1: Organic and Bio-Organic Chemistry (1972-1999), 1985, p. 2033 - 2038
[5] Patent: WO2009/133052, 2009, A1, . Location in patent: Page/Page column 42
[6] Patent: WO2005/42473, 2005, A1, . Location in patent: Page/Page column 9-10
[7] Patent: WO2003/87081, 2003, A1, . Location in patent: Page/Page column 9
[8] Patent: WO2003/101931, 2003, A2, . Location in patent: Page 10-15; 19
[9] Patent: US2004/14997, 2004, A1, . Location in patent: Page 10
[10] Patent: JP2005/507900, 2005, A, . Location in patent: Page/Page column 24-25
[11] Patent: WO2010/4575, 2010, A2, . Location in patent: Page/Page column 16-17
[12] Dyes and Pigments, 2012, vol. 93, # 1-3, p. 1512 - 1518
[13] Patent: WO2008/136017, 2008, A1, . Location in patent: Page/Page column 30
  • 3
  • [ 3179-63-3 ]
  • [ 109-54-6 ]
YieldReaction ConditionsOperation in experiment
83% With thionyl chloride In chloroform at 0 - 70℃; for 4 h; Inert atmosphere To a stirred solution of 3-(dimethylamino) propan-1-ol 86 (2.0 g, 1.94 mmol) inCHC13 (50 mL) under inert atmosphere was added thionyl chloride (4.22 mL, 58.23 mmol) at 0°C; heated to 70 °C and stirred for 4 h. The reaction was monitored by TLC; after completion of the reaction, the volatiles were removed in vacuo to obtain the crude. The crude was washed with diethyl ether (2 x 30 mL) to afford compound 87 (2.5 g, 83percent) as white solid. TLC: 5percent MeOH/ CH2C12 (Rf: 0.2); ‘H-NMR (DMSO-d6, 500 MHz): ö 10.97 (br s, 1H), 3.74 (t, J = 6.4Hz, 2H), 3.12 (t, J= 7.8 Hz, 2H), 2.72 (s, 6H), 2.20-2.12 (m, 2H).
Reference: [1] Patent: WO2018/53157, 2018, A1, . Location in patent: Page/Page column 116
[2] Annales Pharmaceutiques Francaises, 1946, vol. 4, p. 173[3] Chem.Abstr., 1947, p. 5099
[4] Tetrahedron, 1962, vol. 18, p. 245 - 255
[5] Arzneimittel-Forschung, 1962, vol. 12, p. 25 - 29
[6] Bioorganic and Medicinal Chemistry, 2015, vol. 23, # 21, p. 6875 - 6884
  • 4
  • [ 124-40-3 ]
  • [ 109-70-6 ]
  • [ 109-54-6 ]
Reference: [1] Helv.Engi-Festschr., <1941>215,
[2] Journal of the American Chemical Society, 1955, vol. 77, p. 3536,3540
[3] Helv.Engi-Festschr., <1941>215,
[4] Patent: WO2004/99141, 2004, A1, . Location in patent: Page 9-10
[5] Archiv der Pharmazie, 2018, vol. 351, # 8,
[6] Patent: CH221596, 1941, ,
[7] Patent: CH221596, 1941, ,
  • 5
  • [ 20904-57-8 ]
  • [ 109-54-6 ]
Reference: [1] Chemische Berichte, 1906, vol. 39, p. 1425
  • 6
  • [ 17268-49-4 ]
  • [ 109-54-6 ]
Reference: [1] J. Gen. Chem. USSR (Engl. Transl.), 1962, vol. 32, p. 432 - 438[2] Zhurnal Obshchei Khimii, 1962, vol. 32, p. 439 - 445
  • 7
  • [ 110129-11-8 ]
  • [ 110129-14-1 ]
  • [ 109-54-6 ]
Reference: [1] Collection of Czechoslovak Chemical Communications, 1986, vol. 51, # 12, p. 2848 - 2868
  • 8
  • [ 30340-95-5 ]
  • [ 109-54-6 ]
Reference: [1] Journal of Organic Chemistry USSR (English Translation), 1970, vol. 6, # 10, p. 2035 - 2037[2] Zhurnal Organicheskoi Khimii, 1970, vol. 6, # 10, p. 2026 - 2028
  • 9
  • [ 926-63-6 ]
  • [ 67-66-3 ]
  • [ 7782-50-5 ]
  • [ 108-14-5 ]
  • [ 109-54-6 ]
Reference: [1] Journal of the American Chemical Society, 1951, vol. 73, p. 1494,1497
  • 10
  • [ 7647-01-0 ]
  • [ 20904-57-8 ]
  • [ 109-54-6 ]
  • [ 108-95-2 ]
Reference: [1] Chemische Berichte, 1906, vol. 39, p. 1425
  • 11
  • [ 39607-90-4 ]
  • [ 109-54-6 ]
  • [ 303-49-1 ]
Reference: [1] ChemCatChem, 2018, vol. 10, # 19, p. 4346 - 4352
  • 12
  • [ 143-33-9 ]
  • [ 109-54-6 ]
  • [ 13989-82-7 ]
Reference: [1] Collection of Czechoslovak Chemical Communications, 1977, vol. 42, p. 1838 - 1850
[2] Farmaco, Edizione Scientifica, 1962, vol. 17, p. 753 - 772
[3] , 1968, vol. 4, # 4, p. 122 - 125[4] Zhurnal Organicheskoi Khimii, 1968, vol. 4, # 4, p. 128 - 133
  • 13
  • [ 151-50-8 ]
  • [ 109-54-6 ]
  • [ 13989-82-7 ]
Reference: [1] Journal of Organic Chemistry, 1961, vol. 26, p. 1826 - 1831
  • 14
  • [ 109-54-6 ]
  • [ 122-51-0 ]
  • [ 1116-77-4 ]
YieldReaction ConditionsOperation in experiment
75.8% With iodine; magnesium In benzene for 3.25 - 4.33333 h; Heating / reflux Into a 2L four-necked round bottom flask was charged magnesium turnings (25gr) under nitrogen atmosphere. Benzene [(50ML),] the above benzene solution [(50ML),] triethyl orthoformate (20gr), and a small crystal of iodine were added to the reaction flask and slowly heated to reflux temperature. Within 15-20min of refluxing period, a vigorous reaction took place indicating the initiation of Grignard reaction. Remaining quantity of benzene solution and triethyl orthoformate of the [FORMULA-XVII] where [R3 = R5] = Et (174gr) were separately taken into two addition funnels and slowly added in 3-4hrs period to the reaction mixture under reflux temperature. The reaction mass was cooled to [25°C] and filtered through celite pad. The cake was washed with benzene [(100ML).] Benzene was removed from the reaction mass using 20cm Vigroux column at atmospheric pressure. The residue was distilled under mild vaccum keeping mass temperature below [100°C] to get the excess triethyl orthoformate (60gr). Finally, [4- (N,] N- dimethylamino)-butyraldehyde diethyl acetal was distilled under vaccum to get 125gr (75.8percent) as colourless liquid. B. p.: [140-150°C/15-20MM.]
72.8% With iodine; magnesium In cyclohexane for 5.25 - 6.33333 h; Heating / reflux Into a 2L four-necked round bottom flask was charged magnesium turnings (25gr), cyclohexane [(50ML),] the above cyclohexane solution [(50ML),] triethyl orthoformate (20gr), and a small crystal of iodine were added into the flask and heated to reflux temperature. Within [15-20MIN] of reflux, vigorous reaction took place indicating the initiation of Grignard reaction. Remaining quantity of the cyclohexane solution [(600ML)] and triethyl orthoformate of the [FORMULA-XVII] where R3 = [R5] = Et (175gr) were taken into two separate addition funnels and added to the reaction mass at reflux temperature over a period of [3-4] hrs. After the addition, the reaction mass was maintained at reflux for another 2hrs and cooled to [25°C.] The reaction mass was filtered over a celite pad and washed the cake with 100ml of cyclohexane. Cyclohexane was removed from the reaction mass by ordinary distillation keeping a 20cm vigroux column. Excess triethyl orthoformate was distilled under mild vaccum keeping the mass below [80°C.] Finally, the residue was distilled under vaccum to afford 120gr (72.8percent) of 4- (N, N- dimethylamino) butyraldehyde diethyl acetal as a colorless liquid.
Reference: [1] Patent: WO2003/101931, 2003, A2, . Location in patent: Page 14-15
[2] Patent: WO2003/101931, 2003, A2, . Location in patent: Page 15-16
[3] Patent: WO2004/99141, 2004, A1, . Location in patent: Page 9-10
  • 15
  • [ 14444-77-0 ]
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  • [ 1116-77-4 ]
YieldReaction ConditionsOperation in experiment
72.7%
Stage #1: With iodine; magnesium In benzene for 3.25 - 4.25 h; Heating / reflux
Stage #2: for 3 h;
Into a 2L three-necked round bottom flask was added magnesium turnings (25gr) under nitrogen atmosphere and [50ML] of the above benzene solution added to the reaction flask. After adding a small crystal of iodine, reaction mass was heated to reflux temperature. After maintaining for 15 min, reaction got initiated and to the reaction mass remaining quantity of benzene solution was added slowly in 2-3hrs period. After the addition, reaction mass was maintained for lhr and a solution of phenyl diethyl orthoformate (171gr) in benzene [(200ML)] was added slowly over a period of lhr. After maintaining for 2hrs, reaction was cooled to [25°C] and filtered on a celite pad. Solvent was removed from the reaction mass and the residue fractionally distilled to get 120gr (72.7percent) [OF 4- (N,] N- dimethylamino) butyraldehyde diethyl acetal.
Reference: [1] Patent: WO2003/101931, 2003, A2, . Location in patent: Page 19
  • 16
  • [ 109-54-6 ]
  • [ 2222-33-5 ]
  • [ 18029-54-4 ]
Reference: [1] Journal of Organic Chemistry, 1962, vol. 27, p. 230 - 240
[2] Patent: WO2012/98563, 2012, A2, . Location in patent: Page/Page column 7
  • 17
  • [ 109-54-6 ]
  • [ 549-18-8 ]
Reference: [1] Bioorganic and Medicinal Chemistry, 2006, vol. 14, # 24, p. 8366 - 8378
  • 18
  • [ 1210-35-1 ]
  • [ 109-54-6 ]
  • [ 549-18-8 ]
Reference: [1] Synthetic Communications, 1981, vol. 11, # 3, p. 241 - 246
  • 19
  • [ 7440-44-0 ]
  • [ 13185-09-6 ]
  • [ 109-54-6 ]
  • [ 132-69-4 ]
Reference: [1] Patent: US4749794, 1988, A,
  • 20
  • [ 64169-67-1 ]
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  • [ 59729-32-7 ]
Reference: [1] Patent: WO2004/80988, 2004, A1, . Location in patent: Page 22
  • 21
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  • [ 59729-33-8 ]
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  • [ 59729-32-7 ]
Reference: [1] Patent: WO2004/94399, 2004, A1, . Location in patent: Page 15-16
  • 22
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  • [ 59729-33-8 ]
  • [ 7646-69-7 ]
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  • [ 59729-32-7 ]
Reference: [1] Patent: WO2004/94399, 2004, A1, . Location in patent: Page 14-15
  • 23
  • [ 4504-87-4 ]
  • [ 109-54-6 ]
  • [ 1229-29-4 ]
Reference: [1] Synthetic Communications, 1981, vol. 11, # 3, p. 241 - 246
  • 24
  • [ 776262-13-6 ]
  • [ 133053-48-2 ]
  • [ 119139-20-7 ]
  • [ 109-54-6 ]
  • [ 133052-90-1 ]
Reference: [1] Patent: US5380746, 1995, A,
  • 25
  • [ 269410-08-4 ]
  • [ 109-54-6 ]
  • [ 847818-72-8 ]
Reference: [1] Bioorganic and Medicinal Chemistry Letters, 2008, vol. 18, # 19, p. 5299 - 5302
  • 26
  • [ 109-54-6 ]
  • [ 103146-26-5 ]
YieldReaction ConditionsOperation in experiment
76.9%
Stage #1: With iodine; magnesium In 2-methyltetrahydrofuran at 60℃; for 4.83333 h; Inert atmosphere
Stage #2: at -20℃; for 17.6167 h; Inert atmosphere
Stage #3: With hydrogen bromide In 2-methyltetrahydrofuran at 3℃; for 1 h;
Example 3 Preparation of N,N-dimethyl-3-chloromagnesiopropylamine Grignard reagent
2-methyl tetrahydrofuran as solvent:
Reaction process:
At room temperature, Mg (7.28 g, 300 mmol) and iodine granules (0.506 g, 2 mmol) were suspended in anhydrous 2-methyltetrahydrofuran (80 mL, moisture content: 0.016percent), the reaction mixture was purged with nitrogen for 6 times. The reaction mixture was heated to 60 deg. C and stirred for 15min, the mixture was orange-red.
3-chloro-N, N-dimethylpropylamine (CPA) (24.32 g, 200 mmol) was dissolved in anhydrous 2-methyltetrahydrofuran (120 mL) was added dropwise to the above reaction mixture, reaction liquid from milky white to gray-green, 110min dropwise additon was finished, reaction at 60 ° C for 3 h, the solution of N,N-dimethyl-3-chloromagnesiopropylamine Grignard reagent in 2-methyltetrahydrofuran was cooled to room temperature and was directly used in the next reaction.
Example 4 Preparation of 4-(4-(dimethylamino)-1-(4-fluorophenyl)-1-hydroxybutyl)-3-(hydroxymethyl)benzonitrile hydrobromide
2-methyl tetrahydrofuran as solvent:
Reaction process:
To a solution of the Grignard reagent of formula (III) (200 mL, 200 mmol) in anhydrous 2-methyltetrahydrofuran (541 mL) was added dropwise a solution of 2-methyltetrahydrofuran (541 mL) of formula (II) (54.30 g, 151.50 mmol), the solution was added dropwise over 97 min and the reaction mixture was stirred at -20 ° C for 16 h under nitrogen.
Reaction post-treatment:
Samples were quenched with saturated NH4Cl solution, and 2-methyltetrahydrofuran was analyzed by HPLC. The reaction mixture was allowed to warm to 0 ° C, and a saturated NH4Cl solution (120 mL) was added dropwise to the reaction mixture to quench the reaction mixture. The temperature of the reaction solution was maintained at 10 ° C or less, the white viscous solid was removed by suction filtration, the filtrate was cooled to 3 ° C and hydrogen bromide (30.30 g, 48percent, 179.70 mmol) was added dropwise to the filtrate, the reaction mixture was stirred at 3 ° C for 1 hour. The filtrate was concentrated under reduced pressure to remove 2-methyltetrahydrofuran. The reaction mixture was stirred at room temperature with CH2Cl2 (500 mL) and H2O (250 mL). The reaction mixture was cooled to room temperature, was added to the mixture, a white solid precipitated from the mixture, the reaction mixture was stirred at 15 ° C for 6 h, filtered, the white filter cake was washed with CH2Cl2 (3 x 80 mL) and dried in vacuo at 60 ° C for 16 h to give a white solid (49.33 g, yield: 76.9percent, based on 5-cyanophthalocyanine).
Reference: [1] Patent: CN105294496, 2016, A, . Location in patent: Paragraph 0120-0125; 0141- 0147; 0155-0167
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