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CAS No. : | 6296-99-7 | MDL No. : | MFCD01075695 |
Formula : | C8H13NO4 | Boiling Point : | - |
Linear Structure Formula : | - | InChI Key : | WDTWMEZMHUEZKH-UHFFFAOYSA-N |
M.W : | 187.19 | Pubchem ID : | 226751 |
Synonyms : |
|
Num. heavy atoms : | 13 |
Num. arom. heavy atoms : | 0 |
Fraction Csp3 : | 0.5 |
Num. rotatable bonds : | 6 |
Num. H-bond acceptors : | 4.0 |
Num. H-bond donors : | 1.0 |
Molar Refractivity : | 45.37 |
TPSA : | 78.62 Ų |
GI absorption : | High |
BBB permeant : | No |
P-gp substrate : | No |
CYP1A2 inhibitor : | No |
CYP2C19 inhibitor : | No |
CYP2C9 inhibitor : | No |
CYP2D6 inhibitor : | No |
CYP3A4 inhibitor : | No |
Log Kp (skin permeation) : | -6.72 cm/s |
Log Po/w (iLOGP) : | 1.92 |
Log Po/w (XLOGP3) : | 1.02 |
Log Po/w (WLOGP) : | -0.04 |
Log Po/w (MLOGP) : | 0.01 |
Log Po/w (SILICOS-IT) : | 0.08 |
Consensus Log Po/w : | 0.6 |
Lipinski : | 0.0 |
Ghose : | None |
Veber : | 0.0 |
Egan : | 0.0 |
Muegge : | 1.0 |
Bioavailability Score : | 0.55 |
Log S (ESOL) : | -1.25 |
Solubility : | 10.6 mg/ml ; 0.0566 mol/l |
Class : | Very soluble |
Log S (Ali) : | -2.26 |
Solubility : | 1.03 mg/ml ; 0.00549 mol/l |
Class : | Soluble |
Log S (SILICOS-IT) : | -0.57 |
Solubility : | 49.8 mg/ml ; 0.266 mol/l |
Class : | Soluble |
PAINS : | 0.0 alert |
Brenk : | 4.0 alert |
Leadlikeness : | 1.0 |
Synthetic accessibility : | 2.2 |
Signal Word: | Warning | Class: | N/A |
Precautionary Statements: | P261-P280-P305+P351+P338 | UN#: | N/A |
Hazard Statements: | H302-H315-H319-H332-H335 | Packing Group: | N/A |
GHS Pictogram: |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
50% | With N-ethyl-N,N-diisopropylamine; In 1,2-dichloro-ethane; at 70℃; | Step 1: Diethyl 2-((3-phenylureido)methylene)malonate To a mixture of diethyl (aminomethylene)malonate (6.0 g, 32 mmol) and phenyl isocyanate (3.8 mL, 35 mmol) in 1,2-dichloroethane (20 mL) at rt was added N,N-diisopropylethylamine (7.2 mL, 42 mmol). The reaction mixture was then stirred at 70 C. overnight, cooled to rt, added Et2O (50 mL), and stirred for another 30 min. The resulting solid was collected by filtration, washed with ether, and dried to give the product as a white solid (4.88 g, 50%). LCMS calcd for C15H19N2O5 (M+H)+: m/z=307.1. Found: 307.2. |
50% | With N-ethyl-N,N-diisopropylamine; In 1,2-dichloro-ethane; at 70℃; | To a mixuture of diethyl (aminomethylene)malonate (6.0 g, 32 mmol) and phenyl isocyanate (3.8 mL, 35 mmol) in 1,2-dichloroethane (20 mL) at rt was added N,N- diisopropylethylamine (7.2 mL, 42 mmol). The reaction mixture was then stirred at 70 C overnight, cooled to rt, added Et^O (50 mL), and stirred for another 30 min. The resulting solid was collected by filtration, washed with ether, and dried to give the product as a white solid (4.88 g, 50%). LCMS calcd for C15H19N2O5 (M+H)+: m/z = 307.1. Found: 307.2. |
44.5% | With N-ethyl-N,N-diisopropylamine; In 1,4-dioxane; at 100℃; for 18.0h; | To a 40 mL vial containing diethyl 2-(aminomethylene)malonate (400 rng, 2.14 mmol), DIPEA (411 uL, 2.35 mmol) in dioxane (0.6 mL) was added isocyanatobenzene (244 uL, 2.24 mmol). The reaction was heated to 100C for 18 hours then cooled to room temperature. The precipitate that formed was collected by filtration with small dioxane and hexane rinses and dried under vacuum to give the title compound (294 mg, 44.5%) as a white solid. Ti NMR (500 MHz, DMSO-de) d 10.76 - 10.50 (m, 1H), 10.48 - 10.25 (m, 1H), 8.48 (br s, 1H), 7.59 - 7.45 (m, 2H), 7.39 - 7.25 (m, 2H), 7.16 - 7.02 (m, 1H), 4.25 (q,.7=7.0 Hz, 2H), 4.16 (q,.7=7.0 Hz, 2H), 1.31 - 1.22 (ra, 6H); LCMS (M+H) = 307; HPLC RT = 2.298 min (Column: Chromolith ODS S5 4.6 x 50 mm; Mobile Phase A: 10:90 MeOH: ater with 0.1% TFA; Mobile Phase B: 90: 10 MeOH: water with 0.1% TFA; Temperature: 40 C; Gradient: 0-100% B over 4 min; Flow: 4 mL/min). |
With N-ethyl-N,N-diisopropylamine; In 1,2-dichloro-ethane; at 100℃; for 6.0h; | l-Ethyl-2,4-dioxo-3-phenyl-l,2,3,4-tetrahydro-pyrimidine-5-carboxylic acid [4-(6,7- dimethoxy-quinolin-4-yloxy)-3-fluoro-phenyl]-amide. To a solution of 2- aminomethylene-malonic acid diethyl ester (0.75 g, 4.0 mmol) and phenyl isocyanate (0.57 g, 4.4 mmol) in 1 ,2-dichloroethane (20 mL) was added N,N-diisopropylethylamine (0.77 mL, 4.4 mmol) and heated at 100 C 6 h. The mixture was cooled and filtered. The solids were purified by column chromatography with 0-5% MeOH in methylene chloride. This intermediate urea was suspended in ethanol (10 mL) and 21% NaOEt in ethanol (1.29 mL, 4.0 mmol ) was added. After 18 h the solvent was removed under vacuum and the residue was slurred in ethyl acetate. The organics were washed with 1M citric acid solution, water and brine. The solvent was removed under vacuum and the residue was purified by chromatography with 0-5% MeOH in dichloromethane to give 0.50 g (40%). The ester was alkylated and hydro lyzed using methods for example 92 to give l-ethyl-2,4- dioxo-3-phenyl-l,2,3,4-tetrahydro-pyrimidine-5-carboxylic acid. 1H NMR (DMSO) ?: 12.65 (bs, 1H), 8.82 (s, 1H), 7.54-7.43 (m, 3H), 7.32-7.29 (m, 2H), 4.02 (q, 2H, J = 7.1 Hz), 1.26 (t, 3H, J = 7.1 Hz). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With toluene-4-sulfonic acid; In toluene; at 127℃; for 48.0h; | To a solution of cyclohexanone (4.6 ml, 44.3 mmol) in toluene (170 ml) is added 2- aminomethylene-malonic acid diethyl ester (8.3 g, 44.3 mmol) and p-toluenesulfonic acid (305 mg, 1.77 mmol). The reaction mixture is heated to 127°C for 48h in a Dean-Stark trap to remove water. The crude mixture is concentrated in vacuo and purified by MPLC (500 g silica gel, eluent cyclohexane:EtOAc 80:20 to 70:30) to give 2-(cyclohex-1 - enylaminomethylene)-malonic acid diethyl ester. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
96% | With ammonia; In ethanol; at 20℃; for 1.0h; | Ammonia was passed through ethanol (200 mL) for 30 minutes. Diethyl 2- (ethoxymethylene) malonate (21.6 g, 0.1 mol, 1.0 eq) was dissolved in an ammonia / ethanol solution and reacted at room temperature for 1 hour. After the reaction was detected by LC-MS and TLC, the reaction was concentrated. The crude product was purified by silica gel column chromatography (100-200 mesh silica gel, PE / EA = 5: 1) to obtain a white solid (18 g, yield: 96%) |
With ammonia; In ethanol; at 20℃; for 1.0h; | 2-Ethoxymethylene-malonic acid diethyl ester (20 ml, 100 mmol) and a 10% soln. of ammonia in EtOH (37 ml, 220 mmol) are stirred at rt for 1 h. The mixture is evaporated and dried in HV to give 2-aminomethylene-malonic acid diethyl ester that is used without further purification. | |
With ammonia; In ethanol; | a Diethyl aminomethylenemalonate To diethyl ethoxymethylenemalonate (50.13 g, 0.232 mmol), cooled to -20 C. under nitrogen, was added a 2.0 M solution of ammonia in ethanol (232 ml, 0.464 mmol) and the resulting solution was stirred at room temperature overnight. The solution was then evaporated in vacuo to give a quantitative yield of the title compound as a cream solid; 1H NMR (360 MHz, CDCl3) 5 1.28 (3H, t, J 7.1 Hz), 1.35 (3H, t, J 7.1 Hz), 4.19 (2H, q, J 7.1 Hz), 4.26 (2H, q, J 7.1 Hz), 5.68 (1H, br s), 8.11 (1H, dd), 8.69 (1H, br s). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
EXAMPLE 59 8-Chloro-N-((4-chlorophenyl)methyl)-4-hydroxy-5-trifluoro-methyl-3-quinolinecarboxamide STR103 A mixture of 2-chloro-5-trifluoromethylaniline (3.91 g) and diethyl ethoxymethylenemalonate (4.0 mL) is heated at 190° C. for 2 h and is then diluted with diphenyl ether (30 mL). The mixture is allowed to cool to rt, filtered, and the white solid is washed with hexane (2*10 mL) to afford 1.632 g of the diethyl amino-methylenemalonate. The resulting intermediate (2.63 g) is suspended in diphenyl ether (30 mL) and heated to reflux with a Dean-Stark trap for 3 h. The mixture is allowed to cool to rft and is then poured into hexane (50 mL). The solid is filtered and then washed with hexane (20 mL) and hexane/diethyl ether (1/1, 20 mL) to afford 1.273 g of the quinolinecarboxylate ethyl ester. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
In toluene, p-toluenesulfonic acid monohydrate; ethyl acetate; toluene; | 1,4-Dioxaspiro[4.5]decan-8-one (40 g) and <strong>[6296-99-7]diethyl aminomethylenemalonate</strong> (47.94 g) are dissolved in 500 ml of toluene. p-Toluenesulfonic acid monohydrate (2.44 g) and 100 ml of toluene are then added and the mixture is refluxed for 3 days collecting water in a Dean-Stark trap. The resulting mixture is decanted and solvent is removed to leave on oil. This oil is flash chromatographed on 750 g silica gel using 9:1 CH2 Cl2, EtOAc as eluant to yield diethyl N-(1,4-dioxaspiro[4.5]decen-8-yl)aminomethylenemalonate as an oil. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
In diphenylether; | Example 79 The following procedure is a modified version of one reported by Kametani, et al., J. Het. Chem., 1977, 14, 477. 25 g. of <strong>[6296-99-7]diethyl aminomethylenemalonate</strong>, 18 g. of phenylacetone dimethylketal, 300 ml. of dry diphenyl ether and 1.0 g. of TSA.H2 O were mixed and heated under a nitrogen atmosphere at 135°-145° C. for three hours. The mixture was then brought to reflux. After 30 minutes the solution was cooled and extracted with 200 ml. of 21/2percent aqueous NaOH solution. The basic extracts were acidified yielding a precipitate of ethyl 6-methyl-5-phenyl-4-oxonicotinate. Recrystallization of this material from methylene chloride/ether provided 12.3 g. of white solid, m.p.=178°-180° C. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With toluene-4-sulfonic acid; In toluene; | A mixture of 12.6 g of 4-ethylcyclohexanone, 17.0 g of <strong>[6296-99-7]diethyl aminomethylenemalonate</strong>, and 950 mg of p-toluenesulfonic acid in 170 ml of toluene is heated at reflux for 48 hours with a water separator, under nitrogen atmosphere. The solvent is removed under nitrogen atmosphere and under vacuum, and the residue purified by flash column chromatography on a silica gel column eluted with methylene chloride. The desired product, diethyl N-(4-ethylcyclohexen-1-yl)-aminomethylenemalonate is obtained as an oil. | |
With toluene-4-sulfonic acid; In toluene; | A mixture of 12.6 g of 4-ethylcyclohexanone, 17.0 g of <strong>[6296-99-7]diethyl aminomethylenemalonate</strong>, and 950 mg of p-toluenesulfonic acid in 170 ml of toluene is heated at reflux for 48 hours with a water separator, under nitrogen atmosphere. The solvent is removed under nitrogen atmosphere and under vacuum, and the residue purified by flash column chromatooraphy on a silica qel column eluted with methylene chloride. The desired product, diethyl N-(4-ethylcyclohexen-1-yl)-aminomethylenemalonate is obtained as an oil. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With p-toluenesulfonic acid monohydrate; In 5,5-dimethyl-1,3-cyclohexadiene; | A mixture of 25.0 g of cyclodecanone, 60.7 g of <strong>[6296-99-7]diethyl aminomethylenemalonate</strong>, 1.54 g of p-toluenesulfonic acid monohydrate in 500 ml xylene is refluxed 2 weeks under argon, collecting the distillate in a Dean-Stark trap. The solution is then decanted and solvent is removed. The residual oil is triturated twice with hexane and the combined hexane extract is concentrated to yield an oil which is flash chromatographed on 600 g of silica gel using 99:1 methylene chloride ethyl acetate as eluent. A forerun containing cyclodecanone is discarded and the fractions containing the product are combined and concentrated to dryness to give diethyl N-(1-cyclodecenyl)-aminomethylenemalonate as an oil. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
In dichloromethane; ethyl acetate; toluene; | A solution of 139 g of cyclooctanone, 103 g of <strong>[6296-99-7]diethyl aminomethylenemalonate</strong>, and 7 g of dichloroacetic acid in 500 ml toluene is refluxed for 60 hours with a water separator under nitrogen atmosphere, then evaporated to dryness. The residual oil is triturated with 1600 ml heptane and the heptane extract evaporated to dryness. The dried material is purified by flash chromatography on a silica gel column with 2percent ethyl acetate in methylene chloride as eluent to give a mixture of cyclooctanone and diethyl N-(1-cyclooctenyl)-aminomethylenemalonate. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
1,8-diazabicyclo[5.4.0]undec-7-ene; In N-methyl-acetamide; methanol; water; acetonitrile; | The product (2.37 g; 1.0 cmole) was dissolved in dimethylformamide or acetonitrile (10 ml) and a solution of trimethylsilyl alpha-bromocyclopropylcarboxylate in acetonitrile was added next. After stirring overnight at room temperature, in the exclusion of moisture, methanol (2 ml) was added and the mixture refluxed in the presence of DBU (1,8-diazabbicyclo[5.4.0]undec-7-ene). Next, the solvent was distilled off under vacuum, and the residue was treated with water and recrystallized from benzene. Following method I, the reaction with diethyl trimethylsilyloxymethylenemalonate yields the corresponding diethyl aminomethylenemalonate. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
1.90 g (28%) | With phosphorus pentaoxide; In tetrahydrofuran; | b Ethyl 1,4-dihydro-2-methyl-4-oxo-3-phenyl-5-pyridinecarboxylate A mixture of <strong>[6296-99-7]diethyl aminomethylenemalonate</strong> (5.00 g, 26.7 mmol), phenylacetone (3.51 ml, 26.7 mmol) and phosphorus pentoxide (6.67 g, 47.0 mmol) in anhydrous THF (40 ml) was stirred at room temperature under nitrogen for 2 days, during which time more phosphorus pentoxide (6.67 g, 47.0 mmol) was added. The solution was decanted from the paste, and the residue was washed with THF (18*30 ml). The combined washings were evaporated in vacuo and the residue was extracted with ethyl acetate (6*50 ml). The combined extracts were washed with saturated aqueous K2CO3 (75 ml), then saturated aqueous NaCl (75 ml), dried (MgSO4) and evaporated in vacuo. The residue was purified by flash chromatography (silica gel, 20percent EtOAc/hexane) to give 3.47 g of a mixture of enamines and phenylacetone. This was added dropwise over 5 min to Dowtherm.(R). A (35 ml), at reflux, and the resulting solution was heated at reflux for a further 5 min. After allowing to cool, the residue was purified by flash chromatography (silica gel, 0-2percent MeOH/CH2Cl2) to afford 1.90 g (28percent) of the title compound as a pale brown solid; 1H NMR (360 MHz, DMSO-d6) delta1.25 (3H, t, J 7.1 Hz), 2.06 (3H, s), 4.18 (2H, q, J 7.1 Hz), 7.16 (2H, d, J 6.9 Hz), 7.30 (1H, t, J 7.3 Hz), 7.38 (2H, t, J 7.5 Hz), 8.15 (1H, br s), 11.74 (1H, br s); MS (ES+) m/z 258 [MH]+. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With phosphorus pentoxide; In tetrahydrofuran; | To a solution of <strong>[6296-99-7]diethyl aminomethylenemalonate</strong> (1O g, 53 mmol) and l-(4- fluorophenyl)-2-propanone (7.21 mL, 54 mmol) in tetrahydrofuran (100 mL) was added phosphorus pentoxide (13.5 g, 95.4 mmol). The reaction mixture was stirred overnight, and then more phosphorus pentoxide (13.5 g, 95.4 mmol) was added. The reaction mixture was stirred overnight again, and then the tetrahydrofuran was decanted from the reaction mixture and more tetrahydrofuran (100 mL) was added. After repeating this process five times the mixture was concentrated under reduced pressure. The resulting residue was diluted with ethyl acetate and water, and the layers were separated. The organic layer was dried over sodium sulfate, filtered and concentrated under reduced pressure. The resulting oil was purified by medium pressure liquid chromatography (0 to 30percent ethyl acetate in hexanes as eluant) to provide an isomeric mixture of the title compound, as a tan oil (5.8 g). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
85% | With N-ethyl-N,N-diisopropylamine; In 1,2-dichloro-ethane; at 100℃; for 6.0h; | a) 2-Aminomethylene-malonic acid diethyl ester (16.7 g, 89.2 mmol) and 4- fluorophenyl isocyanate (10.6 mL, 93.7 mmol) in 1 ,2-dichloroethane (25 mL, 320 mmol) was added N,N-diisopropylethylamine (17.1 mL, 98.1 mmol) and heated at 100 C for 6h. The mixture was cooled on an ice bath and the solid collected and washed with ether to give the urea (24.5 g, 85%). mp = 198-200 C; LCMS m/z = 347 (M + 23); 1H NMR (DMSO) ?: 10.57 (d, 1H, J = 12.3 Hz), 10.41 (s, 1H), J = 12.45 Hz), 8.45 (d, 1H, J = 12.5 Hz), 7.48-7.53 (m, 2H), 7.16-7.21 (m, 2H), 4.24 (q, 2H, J = 7 Hz), 4.15 (q, 2H, J = 7 Hz), 1.22-1.28 (m, 6H). |
85% | With N-ethyl-N,N-diisopropylamine; In 1,2-dichloro-ethane; at 100℃; for 6.0h; | a) 2-Aminomethylene-malonic acid diethyl ester (16.7 g, 89.2 mmol) and 4- fluorophenyl isocyanate (10.6 mL, 93.7 mmol) in 1,2-dichloroethane (25 mL, 320 mmol) was added N,N-diisopropylethylamine (17.1 mL, 98.1 mmol) and heated at 100 C for 6h. The mixture was cooled on an ice bath and the solid collected and washed with ether to give the urea (24.5 g, 85%). mp = 198-200 C; LCMS m/z = 347 (M + 23); 1H NMR (DMSO) delta: 10.57 (d, 1H, J = 12.3 Hz), 10.41 (s, 1H), J = 12.45 Hz), 8.45 (d, 1H, J = 12.5 Hz), 7.48-7.53 (m, 2H), 7.16-7.21 (m, 2H), 4.24 30 (q, 2H, J = 7 Hz), 4.15 (q, 2H, J = 7 Hz), 1.22-1.28 (m, 6H). |
1.01 g | With N-ethyl-N,N-diisopropylamine; In 1,2-dichloro-ethane; at 100℃; for 16.0h; | Diethyl 2-(aminomethylene)malonate (1.5 g, 8.0 . mmol, CombiBlocks) and 1- fluoro-4-isocyanatobenzene (0.957 ml, 8.41 mmol) were suspended in DCE (2.67 ml) at room temperature. DIPEA (1.539 ml, 8.81 mmol) was added followed by the dropwise addition of l-fluoro-4-isocyanatobenzene (0.957 ml, 8.41 mmol). The reaction mixture was heated to 100 C and stirred for 16 hr. The partially solidified reaction mixture was cooled to room temperature and diluted with 10 mL of 50% Et20-CH2Cl2. The remaining precipitate was filtered to afford diethyl 2-((3-(4-fluorophenyl)ureido) methylenelma.onate as a cream solid (1.01 g) 1H NMR (400 MHz, DMSO-d6) d 10.72 - 10.32 (m, 21 .}. 8 47 (br d,.1 5.7 Hz, 1H), 7.61 - 7.43 (m, 2H), 7.26 - 6 99 (m, 2H), 4.24 (q, 1=7.1Hz, 21 i s. 4.15 (q, 1=7.1Hz, 2H), 1.26 (dt, j 12.0. 7.1Hz, 6H); LC/MS (M+H) 325.2; LC RT = 0.92 min (Column: BEH C18 2.1 x 50mm; Mobile Phase A: water with 0.05% TEA; Mobile Phase B: acetonitrile with 0.05% TFA; Temperature: 50 C; Gradient: 2-98% B over 1.7 min; Flow: 0.8 mL/min) |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
66% | Step 1. Diethyl 2-((3-(1-methyl-1H-pyrazol-4-yl)ureido)methylene)malonate A mixture of 1-methyl-1H-pyrazol-4-amine (0.097 g, 1.0 mmol) and 1,1'-carbonyldiimidazole (0.178 g, 1.100 mmol) in DMSO (1 mL) was stirred at rt for 1 h, then diethyl 2-(aminomethylene)malonate (0.187 g, 1.00 mmol) was added to the solution. The reaction mixture was stirred at 80° C. overnight, cooled to rt, and directly purified via column chromatography (0percent to 100percent EtOAc in hexanes) to afford the product (0.204 g, 66percent). LCMS calcd for C13H19N4O5 (M+H)+: m/z=311.1. Found: 311.2. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
65% | With N-ethyl-N,N-diisopropylamine; In 1,2-dichloro-ethane; at 70℃; | Step 3: Diethyl 2-((3-pyridin-2-ylureido)methylene)malonate To a mixture of diethyl 2-(aminomethylene)malonate (3.0 g, 16.0 mmol) and 2-isocyanatopyridine (2.02 g, 16.8 mmol) in 1,2-dichloroethane (9.0 mL) at rt was added N,N-diisopropylethylamine (3.6 mL, 20.8 mmol). The reaction mixture was then stirred at 70 C. overnight, cooled to rt, and directly purified via column chromatography (0% to 15% MeOH in CH2Cl2) to give the product (3.18 g, 65%). LCMS calcd for C14H18N3O5 (M+H)+: m/z=308.1. Found: 308.1. |
65% | With N-ethyl-N,N-diisopropylamine; In 1,2-dichloro-ethane; at 70℃; | To a mixture of diethyl 2-(aminomethylene)malonate (3.0 g, 16.0 mmol) and 2- isocyanatopyridine (2.02 g, 16.8 mmol) in 1 ,2-dichloroethane (9.0 mL) at rt was added N,N- diisopropylethylamine (3.6 mL, 20.8 mmol). The reaction mixture was then stirred at 70 °C overnight, cooled to rt, and directly purified via column chromatography (0percent to 15percent MeOH in CH2CI2) to give the product (3.18 g, 65percent). LCMS calcd for C14H18N3O5 (M+H)+: m/z = 308.1. Found: 308.1. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
10% | An oven dried two neck flask was charged with 2~(2~ (trifluoromethyl)phenyl)acetic acid (0 5 g, 2.449 mmol) under nitrogen. The starting material was suspended in dioxane (5 mL). Diisopropylethylamine (0.856 ml, 4.90 mmol) was added and a homogeneous solution was obtained. Reaction was initiated with the addition of dipheny.phosphoryl azide (0.582 ml, 2.69 mmol). After stirring for 0.5 hour, the reaction was warmed to 100 C behind a blast shield. A controlled evolution of gas began around 65 C and was complete in about 45 minutes. The reaction was cooled and diethyl 2-(aminomethylene)malonate (0.458 g, 2.449 mmol) was added. The reaction was then warmed to 100 C and stirred overnight. The cooled reaction was applied to an 80 g Isco silica gel column and eluted with 0-5% methanol in methylene chloride. This treatment provided a mixture of the desired product and starting material (498 mg). This material was taken into eyclization step without additional purification. The partially purified material was dissolved in ethanol (5 mL) under nitrogen. A solution of sodium ethoxide in ethanol (760 m, 2,052 mmol) was added and stirring continued for an hour. The reaction was then quenched with 5% aqueous citric acid solution. The resultant precipitate was filtered and sequentially rinsed with water and hexanes. Air drying provided ethyl 2,4-dioxo-3-(2-(trifluoromethyl)benzyl)-l,2,3,4-tetrahydropyrimidine-5- carboxylate (44.3 mg, 0.129 mmol, 10 % yield).]H NMR (400 MHz, DMSO-de) d 12, 13 (br s, 1H), 8.30 (s, 1 1 1). 7.77 (d, J= 7.9 Hz, 1H), 7 59 (t,.7=8.3 Hz, 1 1 1). 7 48 (t,.7=7 7 Hz, i l l). 7.12 id. J= 7.6 Hz, 1H), 5.14 (s, 2H), 4.19 (q, 7=7.1Hz, 2H), 1.25 (t, 7=7.1Hz, 41 1); I.CY15 (M+H) = 343.0. HPLC RT = 0.81 min (Waters Acquity SDS using the following method: Linear Gradient of 2% to 98% solvent B over 1.7 min; UV visualization at 220 nm; Column: BEH C18 2.1 mm x 50 mm: 1.7 um particle (Heated to Temp. 50 C); Flo rate: 0.8 ml/min; Mobile phase A: 100% Water, 0.05% TFA; Mobile phase B: 100% Acetonitrile, 0.05% TFA). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With N-ethyl-N,N-diisopropylamine; In 1,4-dioxane; at 70℃;Sealed tube; | Bicyclo[l.1. l]pentan-l -amine, HC1 (504 mg, 4.21 mmol) was suspended m methylene chloride (8 mL) under nitrogen. Triethylamine (1175 m, 8.43 mmol) was added and the reaction was cooled in an ice bath. 4-Nitrophenyl chloroformate (1019 mg, 5.06 mmol) was then added. LCMS shows a prominent peak with the desired mass for product. After 4 hours, the reaction was quenched with water and extracted with methylene chloride. The organic phase was washed with brine. Drying over magnesium sulfate, filtration and evaporation provided the crude 4-nitrophenyl bicycloj 1.1.1 Jpentan- l-ylcarbamate (1.02 g) as a colorless solid. This material was used in the subsequent step without purification. Diethyl 2-(aminomethylene)malonate (326 mg, 1.741 mmol) and 4- mtrophenyl bicyclo[l. l. l jjpentan-l-ylcarbamate (865 mg, 3.48 mmol) were dissolved in dioxane (1.5 mL). Diisopropyl ethylamine (608 m, 3.48 mmol) was added and the reaction vial was sealed and heated to 70 C overnight. The cooled reaction was diluted with ethyl acetate and wshed sequentially with water, 1 N hydrochloric acid, w'ater and brine. Drying over magnesium sulfate, filtration and evaporation provided the crude product. This material was applied to an 80 g Isco silica gel column and eluted with 0- 50% ethyl acetate in hexanes. Evaporation provided diethyl 2-((3-(bicyclo|T. l.l]pentan- l-yl)ureido)methylene)ma.onaie. Tins material was dissolved in ethanol (2 mL) under nitrogen. A solution of sodium ethoxide in ethanol (486 pi, 1.312 mmol) w'as added and the reaction stirred for ca. 1 hour. The reaction ws then quenched with 5% citric acid to generate a precipitate. The solid ws filtered, rinsed with wter and hexanes. Air drying gave ethyl 3-(bicyclo[l.1. l]pentan-l -yl)-2,4-dioxo-l,2,3,4-tetrahydropyrimidine-5- carboxylate (125 mg, 0.499 mmol). NMR (400 MHz, DMSO-de) 6 11 97 - 11.37 (m, 1H), 8.05 (s, 1H), 4.15 (q, J=7.1Hz, 2H), 2.35 (s, 6H), 1.23 (t, J=7.1Hz, 3H) (a peak - I l l - appears to be obscured by the DMSO); LCMS (M+H) = 251.2. HPLC RT 0.67 min (Waters Acquity SDS using the following method; Linear Gradient of 2% to 98% solvent B over 1.7 min; UV visualization at 220 nm; Column: BEH C18 2.1 min x 50 mm; 1.7 um particle (Heated to Temp. 50 C); Flow rate: 0.8 ml/min; Mobile phase A: 100% Water, 0.05% TFA; Mobile phase B: 100% Acetonitrile, 0.05% TFA). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
33% | With N-ethyl-N,N-diisopropylamine; In 1,2-dichloro-ethane; for 6.0h;Reflux; | Dissolving diethyl 2- (aminomethylene) malonate (14 g, 74.86 mmol, 1.0 eq) in 1,2-dichloroethane (200 mL),Add 1-isocyanato-4-methylbenzene (10.95 g, 82.35 mmol, 1.1 eq) and DIEA (10.62 g, 82.35 mmol, 1.1 eq), and heat to reflux for 6 hours. After the reaction was detected by LC-MS and TLC, the temperature was lowered to 0 C, and a large amount of white solid was precipitated. The solid was filtered by suction, the filter cake was washed with ether, and dried to obtain a white solid (7.8 g, yield: 33%). |
Tags: 6296-99-7 synthesis path| 6296-99-7 SDS| 6296-99-7 COA| 6296-99-7 purity| 6296-99-7 application| 6296-99-7 NMR| 6296-99-7 COA| 6296-99-7 structure
[ 67321-05-5 ]
(S)-Benzyl 2-amino-3-(benzyloxy)propanoate
Similarity: 0.55
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