Structure of 5751-81-5
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CAS No. : | 5751-81-5 |
Formula : | C8H10O2S |
M.W : | 170.23 |
SMILES Code : | O=C(C1=CC=C(C)S1)OCC |
MDL No. : | MFCD06204329 |
InChI Key : | NYXZOVWQCSRKMZ-UHFFFAOYSA-N |
Pubchem ID : | 11019293 |
GHS Pictogram: |
![]() |
Signal Word: | Warning |
Hazard Statements: | H302 |
Precautionary Statements: | P280-P305+P351+P338 |
Num. heavy atoms | 11 |
Num. arom. heavy atoms | 5 |
Fraction Csp3 | 0.38 |
Num. rotatable bonds | 3 |
Num. H-bond acceptors | 2.0 |
Num. H-bond donors | 0.0 |
Molar Refractivity | 45.37 |
TPSA ? Topological Polar Surface Area: Calculated from |
54.54 Ų |
Log Po/w (iLOGP)? iLOGP: in-house physics-based method implemented from |
2.45 |
Log Po/w (XLOGP3)? XLOGP3: Atomistic and knowledge-based method calculated by |
2.56 |
Log Po/w (WLOGP)? WLOGP: Atomistic method implemented from |
2.23 |
Log Po/w (MLOGP)? MLOGP: Topological method implemented from |
1.59 |
Log Po/w (SILICOS-IT)? SILICOS-IT: Hybrid fragmental/topological method calculated by |
3.13 |
Consensus Log Po/w? Consensus Log Po/w: Average of all five predictions |
2.39 |
Log S (ESOL):? ESOL: Topological method implemented from |
-2.65 |
Solubility | 0.384 mg/ml ; 0.00226 mol/l |
Class? Solubility class: Log S scale |
Soluble |
Log S (Ali)? Ali: Topological method implemented from |
-3.35 |
Solubility | 0.0755 mg/ml ; 0.000444 mol/l |
Class? Solubility class: Log S scale |
Soluble |
Log S (SILICOS-IT)? SILICOS-IT: Fragmental method calculated by |
-2.53 |
Solubility | 0.504 mg/ml ; 0.00296 mol/l |
Class? Solubility class: Log S scale |
Soluble |
GI absorption? Gatrointestinal absorption: according to the white of the BOILED-Egg |
High |
BBB permeant? BBB permeation: according to the yolk of the BOILED-Egg |
Yes |
P-gp substrate? P-glycoprotein substrate: SVM model built on 1033 molecules (training set) |
No |
CYP1A2 inhibitor? Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set) |
Yes |
CYP2C19 inhibitor? Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set) |
No |
CYP2C9 inhibitor? Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set) |
No |
CYP2D6 inhibitor? Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set) |
No |
CYP3A4 inhibitor? Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set) |
No |
Log Kp (skin permeation)? Skin permeation: QSPR model implemented from |
-5.52 cm/s |
Lipinski? Lipinski (Pfizer) filter: implemented from |
0.0 |
Ghose? Ghose filter: implemented from |
None |
Veber? Veber (GSK) filter: implemented from |
0.0 |
Egan? Egan (Pharmacia) filter: implemented from |
0.0 |
Muegge? Muegge (Bayer) filter: implemented from |
1.0 |
Bioavailability Score? Abbott Bioavailability Score: Probability of F > 10% in rat |
0.55 |
PAINS? Pan Assay Interference Structures: implemented from |
0.0 alert |
Brenk? Structural Alert: implemented from |
0.0 alert: heavy_metal |
Leadlikeness? Leadlikeness: implemented from |
No; 1 violation:MW<1.0 |
Synthetic accessibility? Synthetic accessibility score: from 1 (very easy) to 10 (very difficult) |
2.42 |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Zinc chloride; In chloromethyl methyl ether; | Part 2 4-chloromethyl-<strong>[5751-81-5]5-methyl-thiophene-2-carboxylic acid ethyl ester</strong> A solution of <strong>[5751-81-5]5-methyl-thiophene-2-carboxylic acid ethyl ester</strong> (20.3 g, 0.119 mol) in chloromethyl methyl ether (265 mL, 3.3 mol) is treated with zinc chloride (16.3 g, 119 mmol) and stirred overnight at room temperature. The mixture is poured into water (800 mL) and extracted with dichloromethane (3*). The combined extracts are dried over Na2SO4, filtered and concentrated in vacuo. The resulting residue is distilled to give a mixture of desired product 4-chloromethyl-5-methyl-thiopene-2-carboxylic acid ethyl ester and 3,4-bis-chloromethyl-<strong>[5751-81-5]5-methyl-thiophene-2-carboxylic acid ethyl ester</strong> (3:1, 25.9 g) as a colorless oil which is used without further purification: bp 145-175 C./ 9 mbar. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
85% | With sulfuric acid; In ethanol; | Part 1 5-methyl-thiophene-2-carboxylic acid ethyl ester A solution of 5-methyl-thiophene-2-carboxylic acid (25.2 g, 177 mmol) in EtOH (500 mL) is treated with conc. H2SO4 (15 mL) and heated to a gentle reflux for 72 h. The solution is partially concentrated and poured into water (500 mL) and extracted with Et2O (3*). The combined extracts are washed with aq Na2CO3, water, dried over Na2SO4, filtered and concentrated in vacuo. Vacuum distillation of the residue afforded 5-methyl-thiophene-2-carboxylic acid ethyl ester (25.6 g, 85percent): bp 98-99° C./9-10 mbar; 1H NMR (CDCl3, 300 MHz) delta7.6 (s, 1 H), 6.78 (s, 1 H), 4.30 (q, J=6.0 Hz, 2 H), 2.50 (s, 3 H), 1.34 (t, J=6.0 Hz, 3 H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Ethyl 5-methyl-2-thiophenecarboxylate To a stirred solution of 15.9 g (77.4 mmol) of 1,3-dicyclohexylcarbodiimide in 40 mL dichloromethane was added 10 g (70.3 mmol) of 5-methyl-2-thiophenecaboxylic acid and 4.85 g (105.5 mmol) of anhydrous ethanol. 0.86 g of dimethylaminopyridine was then added and the suspension stirred at room temperature for 20 hours. The resulting white precipitate was removed by filtration. The filtrate was washed with water, dried (MgSO4), filtered and concentrated under reduced pressure. The residue was purified by bulb-to-bulb distillation (bp=95° C. 3 mm Hg) to give the title compound as a clear, pale yellow oil. PMR (CDCl3): delta1.36 (3H, t, J=7.1 Hz), 2.52 (3H, s), 4.32 (2H, q, J =7.1 Hz), 6.76 (1H, d, J =3.8 Hz), 7.61 (1H, d, J =3.8 Hz). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With dibenzoyl peroxide;SiO2; In water; ethyl acetate; benzene; | Ethyl 5-bromomethyl-2-thiophenecarboxylate N-Bromosuccinimide (23.5 g, 132 mmol), benzoyl peroxide (0.26 g) and 90 mL of benzene were brought to reflux under argon. Ethyl 5-methyl-2-thiophenecarboxylate (22.5 g, 132 mmol) was added dropwise through an addition funnel and the resulting mixture was refluxed for 6 hours and then cooled to room temperature and stirred for 16 hours. The mixture was treated with 50 mL of water and extracted with 3*75 mL ether. The ether extracts were combined and washed with 75 mL saturated aqueous NaCl and then dried (MgSO4). The solvent was removed in-vacuo and the residual oil purified by flash chromatography (SiO2, 99:1, ethyl acetate in hexanes) to give the title compound as a clear, yellow oil. PMR (CDCl3): delta1.37 (3H, t, J=7.3 Hz), 4.35 (2H, q, J=7.3 Hz), 4.68 (3H, s), 7.09 (1H, d, J =4.0 Hz), 7.64 (1H, d, J =4.0 Hz). | |
With dibenzoyl peroxide; In water; benzene; | Ethyl 5-bromomethyl-2-thiophenecarboxylate (Compound 21) N-Bromosuccinimide (23.5 g, 132 mmol), benzoyl peroxide (0.26 g) and 90 mL of benzene were brought to reflux under argon. Ethyl 5-methyl-2-thiophenecarboxylate (Compound 20, 22.5 g, 132 mmol) was added dropwise through an addition funnel and the resulting mixture was refluxed for 6 hours and then cooled to room temperature and stirred for 16 hours. The mixture was treated with 50 mL of water and extracted with 3*75 mL ether. The ether extracts were combined and washed with 75 mL saturated aqueous NaCl and then dried (MgSO4). The solvent was removed in-vacuo and the residual oil purified by flash chromatography (SiO2, 99:1, hexane:ethyl acetate) to give the title compound as a clear, yellow oil. PMR (CDCl3): delta1.37 (3H, t, J=7.3 Hz), 4.35 (2H, q, J=7.3 Hz), 4.68 (3H, s), 7.09 (1H, d, J=4.0 Hz), 7.64 (1H, d, J=4.0 Hz). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With sulfuryl dichloride; In acetonitrile; | <strong>[5751-81-5]5-Methyl-2-thiophenecarboxylic acid ethyl ester</strong> (1.84 g) was dissolved in acetonitrile (30 ml), and sulfuryl chloride (1.31 ml) in acetonitrile (20 ml) was added dropwise. The mixture was stirred for 1.5 hour over a water bath, and 10percent aqueous sodium thiosulfate (100 ml) was added. The mixture was stirred at room temperature for 2 hours and extracted with diethyl ether. The extract was washed with saturated aqueous sodium chloride, dried over anhydrous magnesium sulfate and concentrated under reduced pressure. The residue was purified by silica gel column chromatography, and the desired fractions were concentrated under reduced pressure to give 4-chloro-5-methyl-2-thiophenecarboxylic acid ethyl ester (1.67 g). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
35% | With chlorosulfonic acid; at -4℃; for 3h; | delta-Methyl-thiophene^-carboxylic acid ethyl ester (11.7 mmol) is dissolved in Chlorosulfonic acid (4 ml) at -4 °C and stirred 3 hours. The reaction solution is diluted with dichloromethane and ice water is added. The organic layer is washed with water, dried over MgSO4 and the solvent is removed in vacuo. 4-Chlorosulfonyl-5-methyl-thiophene-2- carboxylic acid ethyl ester is obtained as brown oil in a yield of 35 percent. HPLC (Method A): 3.57 min, LCMS (Method A): 2.48 min, 269.0 m/z(MH+) |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
85% | With N-Bromosuccinimide; dibenzoyl peroxide; In tetrachloromethane; for 2h;Reflux; | To a solution of compound SI-14 (400 mg, 2.35 mmol) in CCl4 (20 mL) was added BPO(60 mg, 0.235 mmol) and NBS (628 mg, 3.53 mmol) and the reaction mixture was stirred atreflux for 2 hours. Then, the mixture was extracted with CH2Cl2. The organic layer was washed with aqueous NaHCO3 and brine, dried over anhydrous Na2SO4, filtered andconcentrated to give the crude compound which was purified by preparative TLC to obtainpure Int. 5 (494 mg, 85percent) as a yellow oil. ESI-MS m/z 249 [M+H]+ calc. for C8H9BrO2S.This intermediate was used in the next step without further characterization. |
1.3 g | With N-Bromosuccinimide; dibenzoyl peroxide; In tetrachloromethane; for 2h;Reflux; | To a solution of reagent KR-39 (i .9 g, 0.Oi i mol) in 0014 (30 mL) was addedBPO (2i2 mg, 0.O0immol) and NBS (2.85 g, 0.0i6 mmol), then the reactionmixture was stirred at reflux for 2 hrs until TLC ( PEI EtOAc = 5:i ) showedthe starting material was consumed completely, the mixture was extracted with DOM, the organic layer was washed with aqueous NaHCO3, brine, dried over anhydrous Na2504, concentrated to give the crude compound which was purified by silica gel chromatography ( PE/ EtOAc = 5:1 ) to give pure reagent R-1 1k (1 .3 g, 48.1percent) as a yellow oil. ESI-MS (Mi-i): 249.1 calc. for C8H9BrO2S: 247.9. |
1.3 g | With N-Bromosuccinimide; dibenzoyl peroxide; In tetrachloromethane; for 2h;Reflux; | Preparation of reagent R-12b: ethyl 5-(bromomethyl)thiophene-2-carboxylate To a solution of reagent KR-5 (1 .9 g, 0.01 1 mol) in CCI4 (30 mL) was added benzoyl peroxide (BPO) (212 mg, 0.001 mmol) and /V-Bromosuccinimide (NBS) (2.85 g, 0.016 mmol), then the reaction mixture was stirred at reflux for 2 h until TLC (PE/ EtOAc = 5:1 ) showed the starting material was consumed completely, the mixture was extracted with DCM, the organic layer was washed with aqueous NaHCO3, brine, dried over anhydrous Na2SO4, concentrated to give the crude compound which was purified by silica gel chromatography (PE/ EtOAc = 5:1 ) to give pure reagent R-12b (1 .3 g, 48.1 percent) as a yellow oil. ESI-MS (M+1 ): 249.1 calc. for C8H9BrO2S: 247.9. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
34% | With potassium carbonate; In N,N-dimethyl-formamide; at 25℃; for 2h; | To a solution of commercially available 5-methylthiophene-2-carboxylic acid (SI-13) (1.0g, 7.04 mmol) and K2CO3 (1.94 g, 14.08 mmol) in DMF (10 mL), CH3CH2I (1.65 g, 10.56mmol) was added dropwise and the reaction mixture was stirred at room temperature for 2hours. Then, the reaction was quenched with water and extracted with EtOAc. The organiclayer was washed with brine, dried over anhydrous Na2SO4, filtered and concentrated togive compound SI-14 (400 mg, 34percent) as a pale yellow oil. ESI-MS m/z 171 [M+H]+ calc.for C8H10O2S. This intermediate was used in the next step without further purification orcharacterization. |
With potassium carbonate; In N,N-dimethyl-formamide; at 20℃; | To a solution of commercially available 5-methylthiophene-2-carboxylic acid(9.2 g, 0.065 mol) in DMF (80 mL) was added K2003 (17.9 g, 0.13 mol), thencompound CH3CH2I (15.2 g, 0.98 mol) was added slowly. The reactionmixture was stirred at room temperature overnight. After TLC ( PE/ EtOAc =2:1 ) showed the starting material was consumed completely, the mixture was quenched with water and extracted with EtOAc, the organic layer was washed with brine, dried over anhydrous Na2SO4, concentrated to give the crude reagent KR-39 (9.5 g, 86.3percent) as a pale yellow oil which was used for the next step without further purification. ESI-MS (Mi-i): 171.0 calc. forC8H1002S:170.0. | |
With potassium carbonate; In N,N-dimethyl-formamide; at 20℃; | Preparation of reagent KR-5: ethyl 5-methylthiophene-2-carboxylate To a solution of commercially available 5-methylthiophene-2-carboxylic acid (9.2 g, 0.065 mol) in DMF (80 ml_) was added K2CO3 (17.9 g, 0.13 mol), then compound CH3CH2I (15.2 g, 0.98 mol) was added slowly. The reaction mixture was stirred at room temperature overnight. After TLC (PE/ EtOAc = 2:1 ) showed the starting material was consumed completely, the mixture was quenched with water and extracted with EtOAc, the organic layer was washed with brine, dried over anhydrous Na2SO4, concentrated to give the crude reagent KR-5 (9.5 g, 86.3percent) as a pale yellow oil which was used for the next step without further purification. ESI-MS (M+1 ): 171 .0 calc. for C8H10O2S:170.0. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
63% | Formula (1) as a sign that the compound (0.10 g, 0.50 mmol) in a stirred solution (2.5 mL AcOH solvent) to Mn (OAc) 3.2 H2O (6.7 mg, 0.025 mmol) and CoCl2 (1.3 mg, 0.01 mmol) was added. The reaction mixture and air was vigorously stirred for 3 hours at 25 ° C was added Lawesson's Reagent (0.61 g, 1.5 mmol). The mixture was heated for 1 hour at 90 ° C and cooled to room temperature (room temperature). Quench the mixture with saturated NaHCO3 (saturated NaHCO3) and extracted with CH2Cl2. The organic phase (organic phase) to H2O and brine (brine) wash, dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure. Purification of the crude product by silica gel flash column chromatography to give the compound (54 mg, 0.32 mmol) represented by the formula (8) of a yellow oil type (63percent yield). |
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