Structure of 178546-34-4
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The BI-3802 was designed by Boehringer Ingelheim and could be obtained free of charge through the Boehringer Ingelheim open innovation portal opnMe.com, associated with its negative control.
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CAS No. : | 178546-34-4 |
Formula : | C7H4BrFO2 |
M.W : | 219.01 |
SMILES Code : | OC1=C(C=O)C=C(F)C=C1Br |
MDL No. : | MFCD08458073 |
Boiling Point : | No data available |
InChI Key : | LRRWJLDTMGYWFO-UHFFFAOYSA-N |
Pubchem ID : | 23148955 |
GHS Pictogram: |
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Signal Word: | Warning |
Hazard Statements: | H302 |
Precautionary Statements: | P280-P305+P351+P338 |
Num. heavy atoms | 11 |
Num. arom. heavy atoms | 6 |
Fraction Csp3 | 0.0 |
Num. rotatable bonds | 1 |
Num. H-bond acceptors | 3.0 |
Num. H-bond donors | 1.0 |
Molar Refractivity | 41.51 |
TPSA ? Topological Polar Surface Area: Calculated from |
37.3 Ų |
Log Po/w (iLOGP)? iLOGP: in-house physics-based method implemented from |
1.63 |
Log Po/w (XLOGP3)? XLOGP3: Atomistic and knowledge-based method calculated by |
2.37 |
Log Po/w (WLOGP)? WLOGP: Atomistic method implemented from |
2.53 |
Log Po/w (MLOGP)? MLOGP: Topological method implemented from |
1.97 |
Log Po/w (SILICOS-IT)? SILICOS-IT: Hybrid fragmental/topological method calculated by |
2.6 |
Consensus Log Po/w? Consensus Log Po/w: Average of all five predictions |
2.22 |
Log S (ESOL):? ESOL: Topological method implemented from |
-3.03 |
Solubility | 0.205 mg/ml ; 0.000936 mol/l |
Class? Solubility class: Log S scale |
Soluble |
Log S (Ali)? Ali: Topological method implemented from |
-2.79 |
Solubility | 0.352 mg/ml ; 0.00161 mol/l |
Class? Solubility class: Log S scale |
Soluble |
Log S (SILICOS-IT)? SILICOS-IT: Fragmental method calculated by |
-2.91 |
Solubility | 0.269 mg/ml ; 0.00123 mol/l |
Class? Solubility class: Log S scale |
Soluble |
GI absorption? Gatrointestinal absorption: according to the white of the BOILED-Egg |
High |
BBB permeant? BBB permeation: according to the yolk of the BOILED-Egg |
Yes |
P-gp substrate? P-glycoprotein substrate: SVM model built on 1033 molecules (training set) |
No |
CYP1A2 inhibitor? Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set) |
Yes |
CYP2C19 inhibitor? Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set) |
No |
CYP2C9 inhibitor? Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set) |
No |
CYP2D6 inhibitor? Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set) |
No |
CYP3A4 inhibitor? Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set) |
No |
Log Kp (skin permeation)? Skin permeation: QSPR model implemented from |
-5.95 cm/s |
Lipinski? Lipinski (Pfizer) filter: implemented from |
0.0 |
Ghose? Ghose filter: implemented from |
None |
Veber? Veber (GSK) filter: implemented from |
0.0 |
Egan? Egan (Pharmacia) filter: implemented from |
0.0 |
Muegge? Muegge (Bayer) filter: implemented from |
0.0 |
Bioavailability Score? Abbott Bioavailability Score: Probability of F > 10% in rat |
0.55 |
PAINS? Pan Assay Interference Structures: implemented from |
0.0 alert |
Brenk? Structural Alert: implemented from |
1.0 alert: heavy_metal |
Leadlikeness? Leadlikeness: implemented from |
No; 1 violation:MW<1.0 |
Synthetic accessibility? Synthetic accessibility score: from 1 (very easy) to 10 (very difficult) |
1.4 |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With N-Bromosuccinimide; In DMF (N,N-dimethyl-formamide); at 20℃; for 5h; | N-BROMOSUCCINIMIDE (1.51 g, 8.52 mmol) was added to a magnetically stirred solution OF 5-FLUORO-2-HYDROXYBENZALDEHYDE (1 g, 7.1 mmol) in DMF (10 mL) and the mixture was stirred at room temperature for 5 hour. The mixture was diluted with ethyl acetate and the organic layer was washed with 5% citric acid, brine, dried over anhydrous sodium sulfate and concentrated by evaporation. Product was purified from the residue by chromatography over silica gel employing 50% ethyl acetate/hexanes to give 3-bromo-5-fluoro- 2-hydroxybenzaldehyde (1.2 g) |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
83% | Hexamethylenetetramine (14.7 g, 105 mmol) was slowly added to a solution of 2-bromo-4-fluoro-phenol (10 g, 52.4 mmol) in trifluoroacetic acid (40 ml) at rt and heated to reflux for 18 h. The reaction mixture was cooled to rt and then water (60 ml) and sulfuric acid (30 ml, 50%) were added. The mixture was stirred for 3 h at rt and then extracted twice with ethyl acetate. The combined organic extracts were washed with 1N HCl, water, dried (Na2SO4), filtered and concentrated under reduced pressure to give 9.5 g (83%) of 3-bromo-5-fluoro-2-hydroxy-benzaldehyde.1H NMR (400 MHz, chloroform-d) delta ppm 9.82 (s, 1H), 7.55-7.62 (m, 1H), 7.21-7.32 (M, 1H). | |
73% | With trifluoroacetic acid; for 10h;Reflux; | Weigh compound 30-1 (1.02 g, 5.33 mmol) in trifluoroacetic acid (7 mL), Ulotropine (1.5 g, 10.66 mmol) was added in portions. The system was reacted at reflux for 10 h. After the reaction is over, The system was adjusted to pH = 1 with a 1N hydrochloric acid solution, and the aqueous phase was extracted with ethyl acetate (15 mL x 3). Combined organic phases, Wash with saturated saline (10mL x 1), Dried over anhydrous sodium sulfate, The solvent was distilled off under reduced pressure, The residue was purified by column chromatography (eluent: petroleum ether / ethyl acetate = 100: 1-80: 1), Compound 30-2 was obtained (yellow solid, 739 mg). |
With trifluoroacetic acid; at 80℃; | a) 3-Bromo-5-fluoro-2-hydroxybenzaldehyde A mixture of 2-bromo-4-fluorophenol (5 g, 26.18 mmol), trifluoroacetic acid (60 mL), and hexamethylemetetramine (3.68 g, 26.29 mmol) was stirred overnight at 80 C. The resulting solution was extracted with ethyl acetate (2*20 mL) and the organic layers combined. The resulting mixture was washed with H2O. The resulting mixture was washed with sodium bicarbonate (aq). The resulting residue was dried over anhydrous sodium sulfate and concentrated under vacuum to yield 3-bromo-5-fluoro-2-hydroxybenzaldehyde as a yellow solid. |
To a solution of 2-bromo-4-fluorophenol (2g) in trifluoroacetic acid (10mL) was added hexamethylenetetramine (2.94g) at room temperature, and the resulting mixture was stirred under reflux for 20 hours. A 50% aqueous solution of sulfuric acid was added to the reaction mixture, and the mixture was stirred for further 4 hours at room temperature. The reaction mixture was extracted with ethyl acetate, and washed with water, 1mol/L hydrochloric acid and brine. The organic layer was dried over anhydrous magnesium sulfate, and concentrated under reduced pressure. The residue was purified by column chromatography on silica gel to give the title compound (1.93g). 1H-NMR (CDCl3) delta ppm: 7.25-7.30 (1H, m), 7.56-7.61 (1H, m), 9.83 (1H, s), 11.35 (1H, s) |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With 3-chloro-benzenecarboperoxoic acid; In dichloromethane; at 20℃; | Intermediate 155 3-Bromo-5-fluoro-benzene-1,2-diol: To a solution of <strong>[178546-34-4]3-bromo-5-fluoro-2-hydroxy-benzaldehyde</strong> (12.04 g, 55 mmol) in methylene chloride (200 mL) was added m-CPBA (77% max, 5.3 g). The resulting mixture was stirred at room temperature overnight and quenched with 10% sodium sulfite and 10% sodium bicarbonate. The mixture was extracted with methylene chloride and washed with water. The solvent was removed under vacuum to afford crude material as a light yellow oil. To a solution of the crude oil in methanol was added sodium hydroxide (8.8 g, 0.22 mol) at room temperature. The mixture was stirred at room temperature overnight and neutralized with concentrated hydrochloric acid. The mixture was extracted with methylene chloride and washed with water. The organic solvent was removed under vacuum. Chromatography with 10-40% ethyl acetate in hexanes afforded 6.8 g (60%) of the title compound as a yellow oil. MS APPI m/e 205 [M-H]- |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
To a solution of 221 (6.0 g, 31 mmol, 1 eq) in DMF (38 mL) was added K2CO3 (3.0 g, 41 mmol, 1.3 eq), stirred at rt for 10 min, resulting in a suspension. Iodomethane (3.0 mL, 41 mmol, 1.3 eq) was added dropwise and allowed to stir at rt overnight. TLC (9:1 Hexane:EtOAc) showed no remaining 221. The mixture was diluted into water and extracted with EtOAc. The organic was separated, washed with brine, dried, filtered and concentrated in vacuo to afford 222 as an oil. The crude material was purified by column chromatography (silica gel, 50% DCM in hexane) to afford 2.4 g of 222 as a white solid. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
93% | With triethylamine; magnesium chloride; In tetrahydrofuran; at 160℃; for 0.25h;Microwave irradiation; | To a solution of MgCl2 (powder 325 mesh, 5.0 g, 52 mmol, 2 eq), paraformaldehyde (3.0 g, 79 mmol, 3 eq) and Et3N (7.0 mL, 52 mmol, 2 eq) in THF (60 mL) was added 220 (5.0 g, 26 mmol, 1 eq), heated in the microwave at 160 C for 15 min. TLC (3:2 Hexane:DCM) showed complete consumption of 220. THF was evaporated and the reaction mixture was taken up in EtOAc, washed with brine, dried, filtered and concentrated in vacuo to afford 5.2 g of 221 which was used without purification. Yield 93%. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
63% | Methyl chloroacetate (7.6 mL, 86.8 mmol) was added to a mixture of <strong>[178546-34-4]3-bromo-5-fluoro-2-hydroxy-benzaldehyde</strong> (9.5 g, 43.4 mmol), tetra-N-butyl-ammonium iodide (1.6 g, 4.34 mmol) and anhydrous potassium carbonate (24 g, 174 mmol). The reaction mixture was heated at 130 C. for 4 h, cooled to 0 C., diluted with tetrahydrofuran (100 mL) and then potassium hydroxide (17 g, 303 mmol) in water (100 mL). The mixture was stirred at rt for 18 h and then, concentrated under reduced pressure. The residue was acidified with HCl and extracted with ethyl acetate. The combined organic extracts were dried (Na2SO4), filtered and concentrated under reduced pressure. The crude compound was purified by flash chromatography (SiO2; toluene/EtOAc, 40/1) to give 7.0 g (63%) of the product.1H NMR (400 MHz, methyl alcohol-d4) delta ppm 7.66 (s, 1H), 7.47-7.54 (m, 2H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With potassium carbonate; In N,N-dimethyl-formamide; at 80℃; for 2h; | b) 1-(7-Bromo-5-fluorobenzofuran-2-yl) ethanone Into a 100-mL round-bottom flask was placed <strong>[178546-34-4]3-bromo-5-fluoro-2-hydroxybenzaldehyde</strong> (2 g, 9.13 mmol), 1-chloropropan-2-one (1.1 g, 11.89 mmol), potassium carbonate (2.25 g, 16.28 mmol), and N,N-dimethylformamide (20 mL) and the resulting solution was stirred for 2 h at 80 C. The reaction was then quenched by the addition of water. The resulting solution was extracted with ethyl acetate (2*20 mL) and the organic layers combined. The resulting mixture was washed with sodium chloride (aq). The resulting mixture was concentrated under vacuum. The resulting residue was purified on a silica gel column with ethyl acetate/petroleum ether (10/90). The collected fractions were combined and concentrated under vacuum to yield 1-(7-bromo-5-fluoro-1-benzofuran-2-yl)ethan-1-one as yellow oil. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
29% | With sodium acetate; In acetic acid; for 12h;Reflux; | General procedure: A mixture of compound 20, aldehyde (0.5 mmol, 1 equiv 20), compound 21 (1.2 equiv), and NaOAc (3 equiv) in glacial AcOH (4 mL) was stirred at reflux (12 h) until no starting material remained, assessed by TLC (SiO2, hexane/ethyl acetate, 1:1, v/v). The reaction mixture was cooled down to room temperature, followed by the addition of iced water. The resulting precipitate was filtered and washed successively with water and Et2O (10 mL). The product was subjected to column purification (hexane/ethyl acetate, 0/35%). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
38% | With caesium carbonate; In N,N-dimethyl-formamide; at 80℃; | A round-bottom flask was charged with <strong>[178546-34-4]3-bromo-5-fluoro-2-hydroxybenzaldehyde</strong> (1.00 g, 4.59 mmol, 1.00 equiv), ethyl 1-[(methanesulfonyloxy)methyl]cyclopropane-1-carboxylate (1.53 g, 6.88 mmol, 1.50 equiv), cesium carbonate (4.49 g, 13.8 mmol, 3.00 equiv), and DMF (10 mL). The reaction mixture was stirred overnight at 80 C. and quenched with water (30 mL). The resulting solution was extracted with EtOAc (2*50 mL), and the organic layers were combined, washed with brine (2*30 mL), dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure. The residue was chromatographed on a silica gel column to provide 0.600 g (38% yield) of ethyl 1-(2-bromo-4-fluoro-6-formylphenoxymethyl)cyclopropane-1-carboxylate. LCMS (ESI, m/z): 345 [M+H]+. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
To a solution of <strong>[178546-34-4]3-bromo-5-fluoro-2-hydroxy-benzaldehyde</strong> (240 mg, 1.1 mmol) in THF (1.0 mL) and ethanol (1.0 mL) at RT was added ethanolamine (80 muEpsilon, 1.37 mmol). The reaction mixture was stirred at RT for 1 h and cooled to 0 C NaBH4 (17 mg, 0.44 mmol) was added and the reaction mixture was allowed to warm to RT and was stirred for 4 h. Water (5 mL) was added and the biphasic mixture was stirred for 1 h. H4C1 solution (10 mL) and EtO Ac (10 mL) were added, the layers were separated and the aqueous layer was extracted with EtO Ac (3 x 25 mL) and DCM (3 x 25 mL). The combined organic layers were dried over anhydrous MgS04, filtered, and concentrated under reduced pressure. The residue was suspended in THF (4.0 mL) and MeOH (1.0 mL) and cooled to 0 C. Et3 (152 mg, 1.5 mmol) was added followed by B0C2O (218 mg, 1.0 mmol) and the resulting reaction mixture was stirred overnight. The reaction mixture was concentrated and purified employing silica gel flash chromatography (25-75%> EtOAc/hexanes) to provide the desired product as a clear oil. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
74% | With dihydrogen peroxide; sodium hydroxide; In water; at 20℃; for 2h; | Weigh 30-2 (350mg, 1.6mmol) A solution of sodium hydroxide (83 mg, 2.08 mmol) in water (5 mL). Then a solution of hydrogen peroxide (190 muL, 6.18 mmol) in water (5 mL) was slowly added dropwise. The system was reacted at room temperature for 2h. After the reaction, the system was adjusted to pH = 1 with a 1N hydrochloric acid solution, and the aqueous phase was extracted with ethyl acetate (20 mL x 2). The organic phases were combined, and the organic phase was washed with saturated brine (10 mL x 1). Dry over anhydrous sodium sulfate and evaporate the solvent under reduced pressure. The residue was purified by column chromatography (eluent: petroleum ether / ethyl acetate = 10: 1-8: 1), Compound 30-3 (yellow solid, 258 mg) was obtained. |
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