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CAS No. : | 114078-88-5 |
Formula : | C3H2BrN3 |
M.W : | 159.97 |
SMILES Code : | BrC1=CN=NN=C1 |
MDL No. : | MFCD13193660 |
InChI Key : | LSBKXRBABHPHBW-UHFFFAOYSA-N |
Pubchem ID : | 13905235 |
GHS Pictogram: | ![]() |
Signal Word: | Warning |
Hazard Statements: | H302 |
Precautionary Statements: | P280-P305+P351+P338 |
Num. heavy atoms | 7 |
Num. arom. heavy atoms | 6 |
Fraction Csp3 | 0.0 |
Num. rotatable bonds | 0 |
Num. H-bond acceptors | 3.0 |
Num. H-bond donors | 0.0 |
Molar Refractivity | 27.53 |
TPSA ? Topological Polar Surface Area: Calculated from | 38.67 Ų |
Log Po/w (iLOGP)? iLOGP: in-house physics-based method implemented from | 1.44 |
Log Po/w (XLOGP3)? XLOGP3: Atomistic and knowledge-based method calculated by | -0.01 |
Log Po/w (WLOGP)? WLOGP: Atomistic method implemented from | 0.63 |
Log Po/w (MLOGP)? MLOGP: Topological method implemented from | 0.3 |
Log Po/w (SILICOS-IT)? SILICOS-IT: Hybrid fragmental/topological method calculated by | 1.49 |
Consensus Log Po/w? Consensus Log Po/w: Average of all five predictions | 0.77 |
Log S (ESOL):? ESOL: Topological method implemented from | -1.46 |
Solubility | 5.55 mg/ml ; 0.0347 mol/l |
Class? Solubility class: Log S scale | Very soluble |
Log S (Ali)? Ali: Topological method implemented from | -0.35 |
Solubility | 71.0 mg/ml ; 0.444 mol/l |
Class? Solubility class: Log S scale | Very soluble |
Log S (SILICOS-IT)? SILICOS-IT: Fragmental method calculated by | -2.12 |
Solubility | 1.21 mg/ml ; 0.00759 mol/l |
Class? Solubility class: Log S scale | Soluble |
GI absorption? Gatrointestinal absorption: according to the white of the BOILED-Egg | High |
BBB permeant? BBB permeation: according to the yolk of the BOILED-Egg | Yes |
P-gp substrate? P-glycoprotein substrate: SVM model built on 1033 molecules (training set) | No |
CYP1A2 inhibitor? Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set) | No |
CYP2C19 inhibitor? Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set) | No |
CYP2C9 inhibitor? Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set) | No |
CYP2D6 inhibitor? Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set) | No |
CYP3A4 inhibitor? Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set) | No |
Log Kp (skin permeation)? Skin permeation: QSPR model implemented from | -7.28 cm/s |
Lipinski? Lipinski (Pfizer) filter: implemented from | 0.0 |
Ghose? Ghose filter: implemented from | None |
Veber? Veber (GSK) filter: implemented from | 0.0 |
Egan? Egan (Pharmacia) filter: implemented from | 0.0 |
Muegge? Muegge (Bayer) filter: implemented from | 2.0 |
Bioavailability Score? Abbott Bioavailability Score: Probability of F > 10% in rat | 0.55 |
PAINS? Pan Assay Interference Structures: implemented from | 0.0 alert |
Brenk? Structural Alert: implemented from | 0.0 alert: heavy_metal |
Leadlikeness? Leadlikeness: implemented from | No; 1 violation:MW<1.0 |
Synthetic accessibility? Synthetic accessibility score: from 1 (very easy) to 10 (very difficult) | 1.68 |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
8.8 g | With sodium periodate; In dichloromethane; water; at 0℃; for 12.0h; | One step up the crude was added methylene chloride (200 mL) and water (76 mL), cooled to 0 , sodium periodate (29.4g, 137mmol) with stirring. After the addition was complete the reaction was stirred for 12 hours 0 . Warmed to 25 , liquid separation, the aqueous phase was extracted with dichloromethane (100mL × 3), the organic phases were combined, saturated brine (250mL), dried over anhydrous sodium sulfate, filtered, and the filtrate was concentrated and the crude product was purified by silica gel column chromatography (petroleum ether: ethyl acetate = 10: 1) gave the title compound as a white solid (8.8g, yield 73.5% in two steps). |
710 mg | With sodium periodate; In dichloromethane; water; at 20℃; for 16.0h; | To a solution of compound S2 (1 g, crude) in DCM (15 mL) and water (5 mL) was added NaIO4(2 g, 9.3 mmol). The reaction was stirred at room temperature for 16 hrs. The mixture was diluted with DCM and washed with water, brine, dried over anhydrous Na2SO4, filtered, and concentrated. The residue was purified by silica gel column (eluted with EtOAc/PE=1/5) to give the title compound (710 mg, 65.2% yield) as a purple solid. |
With sodium periodate; In dichloromethane; water; at 0℃; for 4.0h; | A solution of crude 4-bromopyrazol-l-amine (20.0 g, crude) in DCM (500 mL) and water (200 mL) was cooled to 0 C. To the solution was added NaI04 (52.8 g, 246.93 mmol). The resulting mixture was stirred at 0 C for 4 hrs and extracted with DCM (100 mL) for three times. The combined organic layer was washed with brine (100 mL), dried over anhydrous Na2S04 and concentrated in vacuo to give 5-bromotriazine (20.0 g) as brown solid, which was used in next step directly without any further purification |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
36% | In chloroform; at 45℃; for 1.0h; | To a solution of <strong>[114078-88-5]5-bromo-1,2,3-triazine</strong> (25 g, 156 mmol, 1.0 equiv) in CHCl3 (500 mL) was added 1-(cyclopent-1-en-1-yl)pyrrolidine (25.8 g, 188 mmol, 1.1 equiv). The mixture was stirred at 45 oC for 1 h, diluted with DCM (500 mL), washed with brine (300 mL) twice, dried over anhydrous sodium sulfate, concentrated under reduced pressure, and purified by silica gel chromatography (EA/PE, 10/90) to give 11 g (36%) of 3-bromo- 5H,6H,7H-cyclopenta[b]pyridine as a brown solid. |
34.2% | In chloroform; at 0 - 45℃; for 0.833333h; | Weigh <strong>[114078-88-5]5-bromo-1,2,3-triazine</strong> (4.4g, 27.5mmol) was dissolved in chloroform (40 mL), and cooled to 0 deg.] C, was added 1-(cyclopentan-1-en-1-yl)pyrrolidine with stirring -1 After the addition, the reaction mixture was stirred at 0 C for 5 minutes, and raised to 45 C for 45 minutes. The crude product was purified by column chromatography on silica gel (petroleum ether: ethyl acetate = 5: 1 (1: 1) ) to give the title compound (1.86g, yield 34.2%). |
34.3% | In chloroform; at 45℃; for 16.0h; | To a solution of compound S3 (400 mg, 2.5 mmol) in CHCl3(10 mL) was added 1-(cyclopent-1-en-1-yl)pyrrolidine (516 mg, 3.8 mmol). The reaction was stirred at 45 C. for 16 hrs. The reaction mixture was diluted with DCM and washed water, brine, dried over anhydrous Na2SO4, filtered, and concentrated. The residue was purified by silica gel column (eluted with EtOAc/PE=1/10) to give the title compound (170 mg, 34.3% yield) as a gray solid. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
3.1 mg | In chloroform; at 25℃; for 48.0h; | A solution of 12 (16.9 mg, 0.0609 mmol)and 4 A molecular sieves (85 mg) in CHCl3 (1.2 mL, 0.05 M, passedthrough basic alumina) was treated dropwise with pyrrolidine(22 mL, 0.30 mmol) at 25 C. After stirring for 10 h at room tem-perature, the mixture was ltered through a pad of Celite (10%MeOHeCH2Cl21% Et3N) and the solvent was removed under re-duced pressure. The crude enamine was dried under high vacuumfor 5 h. A solution of the enamine 13 in CHCl3 (0.31 mL, passedthrough basic alumina) was treated dropwise with <strong>[114078-88-5]5-bromo-1,2,3-triazine</strong> (20, 19.4 mg, 0.122 mmol) in CHCl3 (0.3 mL). The reactionmixture was stirred for 48 h at 25 C before the solvent was re-moved under reduced pressure. The residue was puried by pre-parative thin-layer chromatography (SiO2, 5% MeOHeCH2Cl2)toprovide 26 (3.1 mg, 13%) as a light tan solid: 1H NMR (500 MHz,CDCl3,50C) d 8.50 (d, J2.2 Hz, 1H), 8.12 (d, J2.2 Hz, 1H), 7.61 (d,J7.1 Hz, 2H), 7.44e7.55 (m, 3H), 7.10e7.36 (m, 2H), 4.51 (br s, 1H),3.90 (t, J10.7 Hz, 1H), 3.70e3.84 (m, 1H), 3.35 (dd, J15.4, 6.3 Hz,1H), 2.90 (t, J14.9 Hz,1H); 13C NMR (150 MHz, CDCl3,50C) d 168.9,155.0,149.0,141.9,136.4,133.0,132.6,130.7,130.6,129.3,128.7,127.4,119.5, 117.9, 117.2, 58.6, 36.6, 35.0; IR (lm) ymax 3345, 2923, 1642,1419,1384,1077, 787, 667 cm1; HRMS (ESI) m/z 391.0439 [(MH),C21H15BrN2O requires 391.0440]. The 1H and 13C NMR spectra of 26in CDCl3 at 25 C exhibit broadened peaks due to Bz rotamers.34 |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
9.0 g | In 1,4-dioxane; at 0 - 30℃; for 2.0h; | To a solution of <strong>[114078-88-5]5-bromotriazine</strong> (20.0 g, crude) in 1,4-dioxane (600 mL) was added pyrimidine-2-carboxamidine (16.8 g, 137.53 mmol) at 0 C. After being stirred at 0 C for 1 hrs, the resulting mixture was warmed to 30 C and stirred at 30 C for 1 hr, and then filtered. The filtrate was concentrated in vacuo. The residue was diluted with H20 (500 mL) and extracted with DCM (500 mL) for three times. The combined organic layer was washed with brine (1.0 L), dried over anhydrous Na2S04 and concentrated in vacuo. The residue was purified on silica gel column (eluting with DCM/MeOH= 10/1, v:v) to give 5-bromo-2-pyrimidin-2-yl-pyrimidine (9.0 g) as yellow solid. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
67% | In chloroform; at 0 - 45℃; for 0.75h;Molecular sieve; | Compound (M-21) (2.00 g, 12.5 mmol) was dissolved in chloroform (25.0 mL), 4A molecular sieve (400 mg,powder) was added, compound (M-22) (3.10 g, 18.8 mmol) was added at 0C, and the mixture was stirred at 0C for 5min. After stirring at 45C for 40 min, the mixture was allowed to cool to room temperature. The solvent was evaporatedunder reduced pressure, and the residue was purified by silica gel column chromatography (n-hexane:ethyl acetate) togive compound (M-23) (yield 1.90 g, 67%) |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
67% | In chloroform; at 0 - 45℃; for 0.75h;Molecular sieve; | Compound (M-21) (2.00 g, 12.5 mmol)Was dissolved in chloroform (25.0 mL)4 A molecular sieve (400 mg, powder)And the compound (M-22) (3.10 g, 18.8 mmol) was added at 0 C.,And the mixture was stirred at 0 C. for 5 minutes.After stirring at 45 C. for 40 minutes, it was allowed to cool to room temperature.The solvent was distilled off under reduced pressure,The residue was purified by silica gel column chromatography (n-hexane: ethyl acetate)Compound (M-23)(Yield 1.90 g, yield 67%). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
In acetonitrile; at 20 - 80℃; for 24.0h; | To a solution of <strong>[114078-88-5]5-bromo-1,2,3-triazine</strong> (3.98 g, 24.88 mmol) in ACN (25 mE) was added ethyl 2-(ethoxy(imino)methyl)cyclobutanecarboxylate (8.40 g,42.20 mmol), and the reaction mixture was stirred at room temperature for 5 minutes before heated to 80 C. and stirred for 24 h. The resulting mixture was concentrated under vacuum. The residue was purified by a silica gel colunm chromatography, eluted with gradient 5%-25% EtOAc in petroleum ethet The fractions containing desired product were combined and concentrated under vacuum to afford ethyl 2-(5-bromopyrimidin-2-yl)cyclobutanecarboxylate. (ES, mlz): 285.0, 287.0 [M+H]. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
25 g | To a solution of 4-bromo-1H-pyrazole (50 g, 340 mmol, 1.0 equiv) in sodium hydroxide (3.7 N, 555 mL) was added (aminooxy)sulfonic acid (116 g, 1.0 mol, 3.0 equiv). The mixture was stirred for 30 min and extracted with DCM (500 mL). The organic layer was washed with brine (200 mL) twice, dried over anhydrous sodium sulfate, concentrated under reduced pressure, and poured into DCM (400 mL) and water (200 mL). To the resulting solution was added NaIO4 (147 g, 685 mmol, 2.0 equiv) at 0 oC. The mixture was stirred overnight, diluted with DCM (500 mL), washed with brine (200 mL) twice, dried over anhydrous sodium sulfate, and concentrated under reduced pressure to afford 25 g of 5- bromo-1,2,3-triazine as brown oil. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
85% | With potassium hydroxide; In acetonitrile; at 80℃; for 8.0h;Inert atmosphere; | In a 10 mL vacuum tube, add <strong>[114078-88-5]5-bromo-1,2,3-triazine</strong> 1a (15.9 mg, 0.10 mmol), methyl 3-oxo-3-phenylpropionate 3b (26.9 mg, 0.15 mmol) and KOH (2.8 mg, 0.05 mmol). Nitrogen was replaced three times, then 0.5 mL MeCN was added, and the reaction tube was placed at 80 C for 8 h. Follow the reaction by TLC, after terminating the reaction, add CH2Cl2 (3x10mL) for extraction, separate the organic phase, dry with Na2SO4, concentrate the organic phase in vacuo, and then obtain the target product 13c by column chromatography, yield (24.8mg, 85%) |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
86% | With potassium hydroxide; In acetonitrile; at 80℃; for 8.0h;Inert atmosphere; | During the screening of reaction conditions, the effects of alkali on the reaction (label 1-9), solvent on the reaction (label 10-16), and temperature on the reaction (label 17-23) were investigated. Finally, KOH was determined as the best base, MeCN as the best solvent, and 80 as the best temperature. The reaction step of the above reference number 21 is as follows: In a 10 mL vacuum tube, add <strong>[114078-88-5]5-bromo-1,2,3-triazine</strong> 3a (15.9 mg, 0.10 mmol), methyl acetoacetate 1 b (17.4 mg, 0.15 mmol) and KOH (2.8 mg, 0.05 mmol). Nitrogen was replaced three times, then 0.5mL MeCN was added, and the reaction tube was placed at 80 C for 8h. Follow the reaction by TLC, after terminating the reaction, add MeCN (3x 10mL) for extraction, separate the organic phase, and dry with Na2SO4,The organic phase was concentrated in vacuo, and then subjected to column chromatography to obtain the target product 1c in a yield (19.7 mg, 86%). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
75% | With pyridine; In benzene; at 50℃; for 0.5h;Inert atmosphere; Sealed tube; | In a 10 mL dry sealed reaction tube, sequentially add <strong>[114078-88-5]5-bromo-1,2,3-triazine</strong> 1a (15.9 mg, 0.10 mmol), 1- (cyanoacetyl) pyrrolidine 4b (24.9 mg, 0.18 mmol) And pyridine (31.6 mg, 0.40 mmol). After nitrogen substitution three times, solvent benzene (1.0 mL) was added, and the sealed reaction tube was placed at 50 C for 0.5 h. The reaction was monitored by TLC. After the reaction was completed, it was extracted with dichloromethane (3 * 10 mL). The organic phase was dried over anhydrous sodium sulfate and concentrated in vacuo. After column chromatography, the target product 12c (20.2 mg, 75%) was obtained.Test and characterize the product 12c, see Figures 2 to 4,The characterization results prove that 1-(cyanoacetyl)pyrrolidine 4b is the ketene imine structure formed by cyanomethyl group under alkaline conditions and reacts with <strong>[114078-88-5]5-bromo-1,2,3-triazine</strong> 1a, 1 -The carbonyl group of the amide in (cyanoacetyl)pyrrolidine 4b does not easily form an enol structure and reacts with <strong>[114078-88-5]5-bromo-1,2,3-triazine</strong> 1a. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With DBN; In 1,4-dioxane; at 70℃; for 4.0h;Inert atmosphere; Sealed tube; | In a 10 mL dry sealed reaction tube, add <strong>[114078-88-5]5-bromo-1,2,3-triazine</strong> 1a (15.9 mg, 0.10 mmol), DBN (37.3 mg, 0.30 mmol) in sequenceAnd 2-acetonitrile pyridine 6b (23.6 mg, 0.20 mmol). After nitrogen substitution three times, the solvent 1,4-dioxane (1.0 mL) was added, and the sealed reaction tube was placed at 70 C. for 4 h. The reaction was monitored by TLC. After the reaction was completed, it was extracted with dichloromethane (3 * 10 mL). The organic phase was dried over anhydrous sodium sulfate and concentrated in vacuo to obtain the target product 27c. For the single crystal structure, see FIG. 1. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
80% | With DBN; In 1,4-dioxane; at 70℃;Inert atmosphere; Sealed tube; | Using the most conditional verification experiment, the reaction steps are: in a 10mL dry sealed reaction tube, add <strong>[114078-88-5]5-bromo-1,2,3-triazine</strong> 1a (15.9mg, 0.10mmol), DBN (37.3 mg, 0.30 mmol) and diethyl cyanomethyl phosphate 1b (35.4 mg, 0.20 mmol). After nitrogen substitution three times, the solvent 1,4-dioxane (1.0 mL) was added, and the sealed reaction tube was placed at 70 C to react. The reaction was monitored by TLC. After the reaction was completed, it was extracted with dichloromethane (3 * 10mL). The organic phase was dried over anhydrous sodium sulfate and concentrated in vacuo. After column chromatography, the target product 1c (24.6mg) was obtained. 80%. |
Tags: 114078-88-5 synthesis path| 114078-88-5 SDS| 114078-88-5 COA| 114078-88-5 purity| 114078-88-5 application| 114078-88-5 NMR| 114078-88-5 COA| 114078-88-5 structure
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H241 | Heating may cause a fire or explosion |
H242 | Heating may cause a fire |
H250 | Catches fire spontaneously if exposed to air |
H251 | Self-heating; may catch fire |
H252 | Self-heating in large quantities; may catch fire |
H260 | In contact with water releases flammable gases which may ignite spontaneously |
H261 | In contact with water releases flammable gas |
H270 | May cause or intensify fire; oxidizer |
H271 | May cause fire or explosion; strong oxidizer |
H272 | May intensify fire; oxidizer |
H280 | Contains gas under pressure; may explode if heated |
H281 | Contains refrigerated gas; may cause cryogenic burns or injury |
H290 | May be corrosive to metals |
Health hazards | |
Code | Phrase |
H300 | Fatal if swallowed |
H301 | Toxic if swallowed |
H302 | Harmful if swallowed |
H303 | May be harmful if swallowed |
H304 | May be fatal if swallowed and enters airways |
H305 | May be harmful if swallowed and enters airways |
H310 | Fatal in contact with skin |
H311 | Toxic in contact with skin |
H312 | Harmful in contact with skin |
H313 | May be harmful in contact with skin |
H314 | Causes severe skin burns and eye damage |
H315 | Causes skin irritation |
H316 | Causes mild skin irritation |
H317 | May cause an allergic skin reaction |
H318 | Causes serious eye damage |
H319 | Causes serious eye irritation |
H320 | Causes eye irritation |
H330 | Fatal if inhaled |
H331 | Toxic if inhaled |
H332 | Harmful if inhaled |
H333 | May be harmful if inhaled |
H334 | May cause allergy or asthma symptoms or breathing difficulties if inhaled |
H335 | May cause respiratory irritation |
H336 | May cause drowsiness or dizziness |
H340 | May cause genetic defects |
H341 | Suspected of causing genetic defects |
H350 | May cause cancer |
H351 | Suspected of causing cancer |
H360 | May damage fertility or the unborn child |
H361 | Suspected of damaging fertility or the unborn child |
H361d | Suspected of damaging the unborn child |
H362 | May cause harm to breast-fed children |
H370 | Causes damage to organs |
H371 | May cause damage to organs |
H372 | Causes damage to organs through prolonged or repeated exposure |
H373 | May cause damage to organs through prolonged or repeated exposure |
Environmental hazards | |
Code | Phrase |
H400 | Very toxic to aquatic life |
H401 | Toxic to aquatic life |
H402 | Harmful to aquatic life |
H410 | Very toxic to aquatic life with long-lasting effects |
H411 | Toxic to aquatic life with long-lasting effects |
H412 | Harmful to aquatic life with long-lasting effects |
H413 | May cause long-lasting harmful effects to aquatic life |
H420 | Harms public health and the environment by destroying ozone in the upper atmosphere |
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