Structure of 937-19-9
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The BI-3802 was designed by Boehringer Ingelheim and could be obtained free of charge through the Boehringer Ingelheim open innovation portal opnMe.com, associated with its negative control.
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CAS No. : | 937-19-9 |
Formula : | C7H6N2O2 |
M.W : | 150.13 |
SMILES Code : | O=C(C1=CC=C(C#N)N1)OC |
MDL No. : | MFCD12924294 |
InChI Key : | OOGGAVZXGHAZIG-UHFFFAOYSA-N |
Pubchem ID : | 12730474 |
GHS Pictogram: |
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Signal Word: | Warning |
Hazard Statements: | H302 |
Precautionary Statements: | P280-P305+P351+P338 |
Num. heavy atoms | 11 |
Num. arom. heavy atoms | 5 |
Fraction Csp3 | 0.14 |
Num. rotatable bonds | 2 |
Num. H-bond acceptors | 3.0 |
Num. H-bond donors | 1.0 |
Molar Refractivity | 36.79 |
TPSA ? Topological Polar Surface Area: Calculated from |
65.88 Ų |
Log Po/w (iLOGP)? iLOGP: in-house physics-based method implemented from |
0.96 |
Log Po/w (XLOGP3)? XLOGP3: Atomistic and knowledge-based method calculated by |
0.95 |
Log Po/w (WLOGP)? WLOGP: Atomistic method implemented from |
0.67 |
Log Po/w (MLOGP)? MLOGP: Topological method implemented from |
-0.57 |
Log Po/w (SILICOS-IT)? SILICOS-IT: Hybrid fragmental/topological method calculated by |
1.21 |
Consensus Log Po/w? Consensus Log Po/w: Average of all five predictions |
0.65 |
Log S (ESOL):? ESOL: Topological method implemented from |
-1.57 |
Solubility | 4.01 mg/ml ; 0.0267 mol/l |
Class? Solubility class: Log S scale |
Very soluble |
Log S (Ali)? Ali: Topological method implemented from |
-1.92 |
Solubility | 1.8 mg/ml ; 0.012 mol/l |
Class? Solubility class: Log S scale |
Very soluble |
Log S (SILICOS-IT)? SILICOS-IT: Fragmental method calculated by |
-1.75 |
Solubility | 2.66 mg/ml ; 0.0177 mol/l |
Class? Solubility class: Log S scale |
Soluble |
GI absorption? Gatrointestinal absorption: according to the white of the BOILED-Egg |
High |
BBB permeant? BBB permeation: according to the yolk of the BOILED-Egg |
No |
P-gp substrate? P-glycoprotein substrate: SVM model built on 1033 molecules (training set) |
No |
CYP1A2 inhibitor? Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set) |
No |
CYP2C19 inhibitor? Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set) |
No |
CYP2C9 inhibitor? Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set) |
No |
CYP2D6 inhibitor? Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set) |
No |
CYP3A4 inhibitor? Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set) |
No |
Log Kp (skin permeation)? Skin permeation: QSPR model implemented from |
-6.54 cm/s |
Lipinski? Lipinski (Pfizer) filter: implemented from |
0.0 |
Ghose? Ghose filter: implemented from |
None |
Veber? Veber (GSK) filter: implemented from |
0.0 |
Egan? Egan (Pharmacia) filter: implemented from |
0.0 |
Muegge? Muegge (Bayer) filter: implemented from |
1.0 |
Bioavailability Score? Abbott Bioavailability Score: Probability of F > 10% in rat |
0.55 |
PAINS? Pan Assay Interference Structures: implemented from |
0.0 alert |
Brenk? Structural Alert: implemented from |
0.0 alert: heavy_metal |
Leadlikeness? Leadlikeness: implemented from |
No; 1 violation:MW<1.0 |
Synthetic accessibility? Synthetic accessibility score: from 1 (very easy) to 10 (very difficult) |
1.99 |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With titanium(III) chloride; In methanol; water; at 70℃; for 3h; | A 20% solution of TiC13 (25 ML, 32 mmol) in water was added to a solution of methyl 5- CYANO-I-HYDROXY-1H-PYRROLE-2-CARBOXYLATE (Intermediate 128,2. 55 g, 15 mmol) in MeOH. The reaction was heated to an external temperature of 70 C for 3 hours. The reaction mixture was concentrated to remove MeOH and the residue was partitioned with EtOAc and water. The organic portion was dried with MgS04 and concentrated to an orange oil. 1H NMR 8 : 3.79-3. 87 (m, 3H); 6.88 (dd, J=3.86, 2.35 HZ, I H) ; 7.02 (dd, J=3.77, 2.07 Hz, I H) ; 13. 42 (s, 1 H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
96% | With sulfuryl dichloride; triethylamine; In dichloromethane; at 0℃; for 0.333333h; | Methyl 5-cyano-1 H-pyrrole-2-carboxylate (Intermediate 129,0. 95 g, 6.3 mmol) was dissolved in anhydrous DCM and cooled to 0 C. TEA was added dropwise and stirred for several minutes followed by the dropwise addition OF SO2CL2. THE reaction was stirred for 20 minutes at 0 C before warming to room temperature. The reaction mixture was diluted with water and extracted. The organic portion was dried with MgS04 and concentrated to a yellow solid (1. 32 g, 96%). IH NMR 6 : 3.80-3. 91 (m, 3H) ; 14. 25 (s, 1H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
43% | A solution of crude 4 (2.3 g, 15.0 mmol) in anhydrous DMF (15 mL) was added dropwise at 0 C to a suspension of sodium hydride (0.38 g 15.0 mmol) in anhydrous DMF (35 mL), and the mixture was stirred for 1 h before addition of (E)-4-ethylhex-4-en-1-yl 4-methylbenzenesulfonate 11l (3.2 g, 11.5 mmol) at 0 C. After being stirred for 12 h at rt, the reaction was quenched with water. The aqueous layer was extracted with ethyl acetate for three times. The combined organic layers were washed with water for five times, dried over anhydrous MgSO4, and concentrated in vacuo. The residue was purified by MPLC to give the title compound (1.28 g, 43%) as a colorless oil, Rf 0.23 (hexane/ethyl acetate=20:1). 1H NMR (400 MHz, CDCl3) δ 6.89 (d, J=4.2 Hz, 1H), 6.73 (d, J=4.2 Hz, 1H), 5.20 (q, J=6.7 Hz, 1H), 4.46 (t, J=7.6 Hz, 2H), 3.86 (s, 3H), 2.05 (q, J=7.4 Hz, 4H), 1.94-1.82 (m, 2H), 1.58 (d, J=6.8 Hz, 3H), 0.95 (t, J=7.6 Hz, 3H); 13C NMR (101 MHz, CDCl3) δ 160.2, 140.0, 126.2, 118.8, 118.1, 117.2, 112.7, 110.1, 51.8, 48.2, 33.3, 29.8, 22.6, 13.0, 12.7; HRMS (EI) calcd for C15H20N2O2: M+, 260.1525. Found: m/z 260.1516. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Ca. 71% | NH2OH·HCl (0.58 g, 8.4 mmol) and NaOAc (0.63 g, 7.6 mmol) were added to a solution of methyl 5-formyl-1H-pyrrole-2-carboxylate 12 (1.14 g, 7.6 mmol) in anhydrous MeOH (8 mL), and the mixture was heated at the reflux temperature for 1 h. The resulting solution was quenched with NaHCO3 aq, and the aqueous layer was extracted with CH2Cl2 for three times. The combined organic layers were dried over anhydrous MgSO4 and concentrated in vacuo to give the corresponding aldoxime (1.11 g, <87%). The crude oxime (5.8 g, 34 mmol) thus obtained was dissolved in anhydrous N,N-dimethylformamide (DMF, 28 mL), and the solution was added dropwise POCl3 (8.4 g, 55 mmol) at -20 C. After being stirred for 30 min at -20 C and then at rt for 2 h, the reaction was quenched with water. The aqueous layer was extracted with CH2Cl2 for three times. The combined organic layers were washed with water for five times, dried over anhydrous MgSO4, and concentrated in vacuo to give the title compound (4.2 g, ∼71%) as a colorless solid (mp=173.7-174.8 C), Rf 0.23 (hexane/ethyl acetate=3:1). 1H NMR (400 MHz, CDCl3) δ 9.92 (br, 1H), 6.89 (dd, J=3.9, 2.5 Hz, 1H), 6.84 (dd, J=4.0, 2.6 Hz, 1H), 3.94 (s, 3H); 13C NMR (101 MHz, CDCl3) δ 160.9, 126.7, 120.1, 115.2, 112.8, 105.7, 52.7; HRMS (EI) calcd for C7H6N2O2: M+, 150.0429. Found: m/z 150.0430. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
84% | General procedure: A solution of 1a - g (10 mmol, 1 eq) in anhydrous DMF (10 mL) was added to slurry of sodium hydride (60 % w/w; 0.48 g, 12 mmol, 1.2 eq) in anhydrous DMF (50 mL) at 0 C over 15 min. The reaction mass was warmed to room temperature and stirred for 1 h, and again cooled to 0 C. Then 2 (1.90 g, 12 mmol, 1.2 eq) was added over 15 min and the reaction mixture stirred at room temperature for 18 h. The mixture was poured into ice-water (200 mL) and the mixture was extracted with EtOAc (3 × 50 mL). The organic layer was washed with water (2 × 30 mL), 1M solution of K2CO3 (20 mL), and brine (20 mL), dried over anhydrous Na2SO4 and concentrated under reduced pressure. The residue was purified by recrystallization. General procedure for 3a was scaled up 5 times. |
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