Structure of 4792-70-5
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The BI-3802 was designed by Boehringer Ingelheim and could be obtained free of charge through the Boehringer Ingelheim open innovation portal opnMe.com, associated with its negative control.
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CAS No. : | 4792-70-5 |
Formula : | C11H9Cl2NO2 |
M.W : | 258.10 |
SMILES Code : | O=C(C(N1)=CC2=C1C(Cl)=CC(Cl)=C2)OCC |
MDL No. : | MFCD03084730 |
InChI Key : | CJYGKZGQACYLTI-UHFFFAOYSA-N |
Pubchem ID : | 4715423 |
GHS Pictogram: |
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Signal Word: | Warning |
Hazard Statements: | H302-H317 |
Precautionary Statements: | P280 |
Num. heavy atoms | 16 |
Num. arom. heavy atoms | 9 |
Fraction Csp3 | 0.18 |
Num. rotatable bonds | 3 |
Num. H-bond acceptors | 2.0 |
Num. H-bond donors | 1.0 |
Molar Refractivity | 64.41 |
TPSA ? Topological Polar Surface Area: Calculated from |
42.09 Ų |
Log Po/w (iLOGP)? iLOGP: in-house physics-based method implemented from |
2.79 |
Log Po/w (XLOGP3)? XLOGP3: Atomistic and knowledge-based method calculated by |
3.86 |
Log Po/w (WLOGP)? WLOGP: Atomistic method implemented from |
3.65 |
Log Po/w (MLOGP)? MLOGP: Topological method implemented from |
2.76 |
Log Po/w (SILICOS-IT)? SILICOS-IT: Hybrid fragmental/topological method calculated by |
3.98 |
Consensus Log Po/w? Consensus Log Po/w: Average of all five predictions |
3.41 |
Log S (ESOL):? ESOL: Topological method implemented from |
-4.09 |
Solubility | 0.021 mg/ml ; 0.0000812 mol/l |
Class? Solubility class: Log S scale |
Moderately soluble |
Log S (Ali)? Ali: Topological method implemented from |
-4.44 |
Solubility | 0.00936 mg/ml ; 0.0000363 mol/l |
Class? Solubility class: Log S scale |
Moderately soluble |
Log S (SILICOS-IT)? SILICOS-IT: Fragmental method calculated by |
-5.0 |
Solubility | 0.00258 mg/ml ; 0.00001 mol/l |
Class? Solubility class: Log S scale |
Moderately soluble |
GI absorption? Gatrointestinal absorption: according to the white of the BOILED-Egg |
High |
BBB permeant? BBB permeation: according to the yolk of the BOILED-Egg |
Yes |
P-gp substrate? P-glycoprotein substrate: SVM model built on 1033 molecules (training set) |
No |
CYP1A2 inhibitor? Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set) |
Yes |
CYP2C19 inhibitor? Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set) |
Yes |
CYP2C9 inhibitor? Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set) |
Yes |
CYP2D6 inhibitor? Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set) |
No |
CYP3A4 inhibitor? Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set) |
No |
Log Kp (skin permeation)? Skin permeation: QSPR model implemented from |
-5.13 cm/s |
Lipinski? Lipinski (Pfizer) filter: implemented from |
0.0 |
Ghose? Ghose filter: implemented from |
None |
Veber? Veber (GSK) filter: implemented from |
0.0 |
Egan? Egan (Pharmacia) filter: implemented from |
0.0 |
Muegge? Muegge (Bayer) filter: implemented from |
0.0 |
Bioavailability Score? Abbott Bioavailability Score: Probability of F > 10% in rat |
0.55 |
PAINS? Pan Assay Interference Structures: implemented from |
0.0 alert |
Brenk? Structural Alert: implemented from |
0.0 alert: heavy_metal |
Leadlikeness? Leadlikeness: implemented from |
No; 1 violation:MW<1.0 |
Synthetic accessibility? Synthetic accessibility score: from 1 (very easy) to 10 (very difficult) |
1.99 |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
64% | With water; sodium hydroxide; In methanol; at 60℃; | A 40-mL vial was charged with ethyl 5,7-dichloro-lH-indole-2-carboxylate (516 mg, 2.00 mmol, 1.00 equiv), MeOH (1 mL), water (5 mL) and sodium hydroxide (120 mg, 3.00 mmol, 1.50 equiv). The resulting solution was stirred overnight at 60 C. The volume of the solution was concentrated to reduce by half. Then the pH value was adjusted to 4-5 with aqueous hydrochloric acid (1 mol/L), resulting in the precipitation of a solid. The solid was collected by filtration, washed with water (3 x 10 mL), and dried to provide 294 mg (64% yield) of 5,7-dichloro-lH-indole-2-carboxylic acid as a light brown solid. LCMS (ESI, m/z): 228 [M- |
In methanol; sodium hydroxide; | C. 5,7-Dichloro-1H-indole-2-carboxylic acid A solution of <strong>[4792-70-5]ethyl 5,7-dichloro-1H-indole-2-carboxylate</strong> (0.80 g, 3.1 mmol) in 1 N NaOH (40 mL) and methanol (50 mL) was heated to reflux for 3 hours. The methanol was removed in vacuo and the aqueous residue was acidified with 1 N HCl and extracted with chloroform twice. The combined extracts were washed with water and brine, dried over magnesium sulfate and concentrated to a solid (0.58 g, 76%). The following indole carboxylic acids were prepared by the same sequence: 4-Chloro-5-fluoro-1H-indole-2-carboxylic acid and 6-chloro-5-fluoro-1H-indole-2-carboxylic acid (as a mixture) from 3-chloro4-fluorophenylhydrazine. 5,7-Difluoro-1H-indole-2-carboxylic acid from 2,4-difluorophenylhydrazine | |
In methanol; sodium hydroxide; | C. 5,7-Dichloro-1H-indole-2-carboxylic acid A solution of <strong>[4792-70-5]ethyl 5,7-dichloro-1H-indole-2-carboxylate</strong> (0.80 g, 3.1 mmol) in 1 N NaOH (40 mL) and methanol (50 mL) was heated to reflux for 3 hours. The methanol was removed in vacuo and the aqueous residue was acidified with 1 N HCl and extracted with chloroform twice. The combined extracts were washed with water and brine, dried over magnesium sulfate and concentrated to a solid (0.58 g, 76 %). The following indole carboxylic acids were prepared by the same sequence: 4- Chloro-5-fluoro-1H-indole-2-carboxylic acid and 6-chloro-5-fluoro-1H-indole-2-carboxylic acid (as a mixture) from 3-chloro-4-fluorophenylhydrazine. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Zinc chloride; In acetic acid; ethyl acetate; | B. Ethyl 5,7-dichloro-1H-indole-2-carboxylate A solution of ethyl 2-oxopropionate 2,4-dichloro-phenylhydrazone (1.1 g, 4.6 mmol) and anhydrous zinc chloride (10 g, 74 mmol) in glacial acetic acid (12 mL) was heated at reflux for 1/2 hours. The reaction mixture was poured into water and extracted with ether twice. The combined organic layers were washed with water and brine, dried over magnesium sulfate and concentrated. The product was purified by flash-chromatography (30% ethyl acetate in hexanes) and obtained as an oil (0.80 g, 67%). | |
Zinc chloride; In acetic acid; ethyl acetate; | B. Ethyl 5,7-dichloro-1H-indole-2-carboxylate A solution of ethyl 2-oxopropionate 2,4-dichloro-phenylhydrazone (1.1 g, 4.6 mmol) and anhydrous zinc chloride (10 g, 74 mmol) in glacial acetic acid (12 mL) was heated at reflux for 1/2 hours. The reaction mixture was poured into water and extracted with ether twice. The combined organic layers were washed with water and brine, dried over magnesium sulfate and concentrated. The product was purified by flash-chromatography (30 % ethyl acetate in hexanes) and obtained as an oil (0.80 g, 67 %). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
82% | With acetic acid; zinc(II) chloride;Reflux; | 1002851 A flask was charged with ethyl (2E)-2-[2-(2,4-dichlorophenyl)hydrazin-1- ylidene]propanoate (3.00 g, 10.9 mmol, 1.00 equiv), acetic acid (50 mL) and zinc chloride (27.2 g, 200 mmol, 18.3 equiv). The resulting solution was refluxed for overnight, cooled to room temperature and poured into water (200 mL). The solid was collected by filtration, washed with water (3 x 10 mL), and dried to provide 2.30 g (82% yield) of ethyl 5,7-dichloro-1H-indole-2- carboxylate as a brown solid. LCMS (ESI, m/z): 258 [M+H] |
82% | With acetic acid; zinc(II) chloride; for 4.0h;Reflux; | A 100-mL round-bottom flask was charged with ethyl (E)-2-(2-(2,4- dichlorophenyl)hydrazineylidene)propanoate (3.00 g, 10.9 mmol, 1.00 equiv), AcOH (50 mL) and zinc chloride (27.2 g, 200 mmol, 18.3 equiv). The resulting solution was refluxed for 4 h. Then the solution was cooled to room temperature and poured into water (200 mL). The solid was collected by filtration, washed with water (3 x 10 mL), and dried to provide 2.30 g (82% yield) of ethyl 5,7-dichloro-lH-indole-2-carboxylate as a brown solid. LCMS (ESI, m/z): 258 [M+H]+. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
81% | With lithium aluminium tetrahydride; In tetrahydrofuran; at 20℃;Inert atmosphere; | A vial was charged with <strong>[4792-70-5]ethyl 5,7-dichloro-1H-indole-2-carboxylate</strong> (500 mg, 1.94 mmol,1.00 equiv), THF (10 mL) and lithium aluminum hydride (111 mg, 2.92 mmol, 1.51 equiv). Theresulting solution was stirred overnight at room temperature under nitrogen. Then water (111 ml),15% sodium hydroxide solution (111 mg) and water (333 mL) were added in sequence at 0C. Thesolids were filtered out and washed with THF (3 x 10 mL). The filtrate was concentrated under reduced pressure to provide 339 mg (81% yield) of(5,7-dichloro-1H-indol-2-yl)methanol as a brown oil. LCMS (ESI, m/z): 216 [M+H]. |
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