Structure of 29150-63-8
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The BI-3802 was designed by Boehringer Ingelheim and could be obtained free of charge through the Boehringer Ingelheim open innovation portal opnMe.com, associated with its negative control.
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CAS No. : | 29150-63-8 |
Formula : | C12H6S3 |
M.W : | 246.37 |
SMILES Code : | C12=C(C=CS3)C3=C(C=CS4)C4=C1C=CS2 |
MDL No. : | MFCD22381057 |
InChI Key : | DKSAJSCNXULKER-UHFFFAOYSA-N |
Pubchem ID : | 44225674 |
GHS Pictogram: |
![]() |
Signal Word: | Warning |
Hazard Statements: | H302-H315-H319-H335 |
Precautionary Statements: | P261-P280-P301+P312-P302+P352-P305+P351+P338 |
Num. heavy atoms | 15 |
Num. arom. heavy atoms | 15 |
Fraction Csp3 | 0.0 |
Num. rotatable bonds | 0 |
Num. H-bond acceptors | 0.0 |
Num. H-bond donors | 0.0 |
Molar Refractivity | 72.59 |
TPSA ? Topological Polar Surface Area: Calculated from |
84.72 Ų |
Log Po/w (iLOGP)? iLOGP: in-house physics-based method implemented from |
2.83 |
Log Po/w (XLOGP3)? XLOGP3: Atomistic and knowledge-based method calculated by |
4.98 |
Log Po/w (WLOGP)? WLOGP: Atomistic method implemented from |
5.33 |
Log Po/w (MLOGP)? MLOGP: Topological method implemented from |
4.06 |
Log Po/w (SILICOS-IT)? SILICOS-IT: Hybrid fragmental/topological method calculated by |
7.04 |
Consensus Log Po/w? Consensus Log Po/w: Average of all five predictions |
4.85 |
Log S (ESOL):? ESOL: Topological method implemented from |
-5.24 |
Solubility | 0.0014 mg/ml ; 0.00000569 mol/l |
Class? Solubility class: Log S scale |
Moderately soluble |
Log S (Ali)? Ali: Topological method implemented from |
-6.5 |
Solubility | 0.0000783 mg/ml ; 0.000000318 mol/l |
Class? Solubility class: Log S scale |
Poorly soluble |
Log S (SILICOS-IT)? SILICOS-IT: Fragmental method calculated by |
-5.24 |
Solubility | 0.00142 mg/ml ; 0.00000578 mol/l |
Class? Solubility class: Log S scale |
Moderately soluble |
GI absorption? Gatrointestinal absorption: according to the white of the BOILED-Egg |
High |
BBB permeant? BBB permeation: according to the yolk of the BOILED-Egg |
No |
P-gp substrate? P-glycoprotein substrate: SVM model built on 1033 molecules (training set) |
Yes |
CYP1A2 inhibitor? Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set) |
Yes |
CYP2C19 inhibitor? Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set) |
Yes |
CYP2C9 inhibitor? Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set) |
Yes |
CYP2D6 inhibitor? Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set) |
No |
CYP3A4 inhibitor? Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set) |
No |
Log Kp (skin permeation)? Skin permeation: QSPR model implemented from |
-4.27 cm/s |
Lipinski? Lipinski (Pfizer) filter: implemented from |
0.0 |
Ghose? Ghose filter: implemented from |
None |
Veber? Veber (GSK) filter: implemented from |
0.0 |
Egan? Egan (Pharmacia) filter: implemented from |
0.0 |
Muegge? Muegge (Bayer) filter: implemented from |
0.0 |
Bioavailability Score? Abbott Bioavailability Score: Probability of F > 10% in rat |
0.55 |
PAINS? Pan Assay Interference Structures: implemented from |
0.0 alert |
Brenk? Structural Alert: implemented from |
0.0 alert: heavy_metal |
Leadlikeness? Leadlikeness: implemented from |
No; 1 violation:MW<2.0 |
Synthetic accessibility? Synthetic accessibility score: from 1 (very easy) to 10 (very difficult) |
2.36 |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
67% | With sodium sulfide nonahydrate; In 1-methyl-pyrrolidin-2-one; at 190℃; for 12h;Inert atmosphere; | 50mL round bottom flask was added compound 2 (0.94g, 2mmol), sodium sulfide nonahydrate (2.67g, 12mmol) and N- methylpyrrolidinone (20mL), 190 under nitrogen for 12 hours.After the reaction was cooled to room temperature, poured into aqueous ammonium chloride solution, filtered, the cake washed with petroleum ether and subjected to silica gel column chromatography eluent, to give a white solid 3 (0.33g, 67% yield). |
62% | With sodiumsulfide nonahydrate; In 1-methyl-pyrrolidin-2-one; at 180 - 190℃; for 38h; | Synthesis Example 3 Synthesis of benzo[1,2-b:3,4-b':5,6-b"]trithiophene (Scheme 1-(2)) [Show Image] In a 30 mL round-bottom flask, sodium sulfide nonahydrate (7.74 g, 32.2 mmol) and NMP (138 mL) were placed and stirred for 15 minutes. Subsequently, 1,3,5-trichloro-2,4,6-tris(trimethylsilylethynyl)benzene (3.0 g, 6.38 mmol) obtained in Synthesis Example 2 was added and heated at 180-190C for 38 hours. After completion of the reaction, the reaction mixture was poured into a saturated aqueous ammonium chloride solution (700 mL) and a precipitated solid substance was obtained by filtration. The resultant solid substance was extracted with chloroform (210 mL), washed with saturated saline solution and dried over anhydrous magnesium sulfate. After the solvent was distilled away under reduced pressure and purification was performed by column chromatography (hexane, butch, Rf = 0.5) to obtain a white solid substance (814 mg, 62%). 1H-NMR(270MHz,CDCl3)δ7.64(d,J=5.4Hz,3H)7.54(d,J=5.4Hz,3H); 13C-NMR(99.5MHz,CDCl3)δ131.94, 131.55, 125.11, 122.44; M.S.(70eV,EI)m/z=246(M+); m.p.156.7-157.7C |
60% | With sodiumsulfide nonahydrate; In 1-methyl-pyrrolidin-2-one; at 185 - 195℃; for 12h; | Under nitrogen atmosphere, sodium sulfide nonahydrate (1.54 g, 6.42 mmol) was added to anhydrous NMP (40 ml) and the mixture was stirred for ten minutes. To this mixture, 1,3,5-trichloro-2,4,6-tris[(trimethylsilyl)ethinyl]benzene (Compound 100)(500 mg, 1.07 mmol) was added, followed by heating at 185C to 195C for 12 hours. Upon completion of the reaction, the mixture was poured into water (400 ml) and precipitated solid was collected by filtration. The solid thus obtained was dissolved in chloroform (200 ml), and the resulting solution was washed with saturated saline. The solution was dried over anhydrous magnesium sulfate and the solvent was removed under reduced pressure. Solid thus obtained was purified by a column chromatography (silica gel and hexane), thereby white crystalline Compound 104 was obtained (156 mg, yield: 60%). 1H-NMR (270 MHz, CDCl3) δ7.64 (d, J=5.4 Hz, 3H) 7.54 (d, J=5.4 Hz, 3H), M.S. (70eV, EI) m/z=246 (M+) |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
76% | With N-Bromosuccinimide; In dichloromethane; acetic acid; at 20℃; for 48h;Inert atmosphere; Darkness; | Example 4 Synthesis of 2,5,8-Tribromobenzo[1,2-b:3,4-b':5,6-b"]trithiophene (33) [Show Image] Under a nitrogen atmosphere, in a 50 mL three-neck flask, benzo[1,2-b:4,5-b':5.6-b"]trithiophene (800 mg, 3.25 mmol) obtained in Synthesis Example 3, methylene chloride (22.7 mL) and acetic acid (5.7 mL) were added. Under light exclusion conditions, NBS (1.73 g, 9.74 mmol) was added little by little and stirred at room temperature 48 hours. After completion of the reaction, water (20 mL) was added. A precipitated solid substance was obtained by filtration and washed with ethanol (50 mL) and THF (20 mL) to obtain a light purple solid substance (1.2 g, 76%). 1H-NMR(270MHz,CDCl3)δ7.51(s,3H);M.S.(70eV,EI)m/z=484(M+) |
52% | With N-Bromosuccinimide; In chloroform; for 12h;Inert atmosphere; Reflux; | General procedure: Under a nitrogen gas stream to IC-7-3 (14.5 g, 60.33 mmol) obtained in Step 2 and NBS (11.81 g, 66.36 mmol) in 200 ml of chloroform was refluxed for 12 hours. After the reaction was terminated by using MgSO4 and the organic layer was separated with methylene chloride to remove the water from the organic layer. After removing the solvent in water is removed, the organic layer was purified by column chromatography (Hexane: MC = 15: 1 (v / v)) to obtain the IC-7-2 (11.75 g, yield 61%). Instead of IC-7-3 (14.5 g, 60.33 mmol) and NBS (11.81 g, 66.36 mmol) the IC-12-3 (20 g, 81.18 mmol) and NBS (47.68To g, 267.89 mmol), and performs the same procedure of the Preparation Example 7 step 3 to obtain a IC-15-2 (20.39 g, yield 52%). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
94% | Under nitrogen, a 100 mL Schlenk flask was charged with compound 3 (1.14 g, 4.6 mmol) and anhydrous tetrahydrofuran(50 mL) was added and the solution was cooled to -78 C. A solution of n-butyllithium in hexane (11.6 mL, 2.4M) was slowly added dropwise to the solution, After stirring, the reaction was continued for 1 hour at -78 C. Then, trimethyltin chloride (12 mL, 1.0 M) was added. The reaction was continued for 1 hour while maintaining the temperature and the system was stirred overnight at room temperature. The organic phase was extracted with dichloromethane, and the combined organic phases were washed successively with saturated brine and water, dried over anhydrous sodium sulfate, filtered, and the organic solvent was removed by rotary evaporation, and recrystallized from ethanol to obtain white solid 4 (3.18g, 94 %). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
83% | Example 3 Synthesis of 2-Benzo[1,2-b:4,5-b':5,6-b"]trithiophenealdehyde (80) [Show Image] Under a nitrogen atmosphere, in a test tube, benzo[1,2-b:4,5-b':5,6-b"]trithiophene (100 mg, 0.405 mmol) obtained in Synthesis Example 3, DMF (0.10 mL, 1.34 mmol) and 1,2-dichloroethane (1.3 mL) were placed. In an ice bath, phosphorus oxychloride (0.13 mL, 1.34 mmol) was added and refluxed for 17 hours. Subsequently, DMF (0.10 mL, 13.4 mmol) and phosphorus oxychloride (0.13 mL, 1.34 mmol) were added, and refluxed for further 17 hours. After a 10% aqueous potassium hydroxide solution was added, the reaction mixture was extracted with chloroform (10 mL x 2), washed with saturated saline solution (40 mL x 3) and dried over anhydrous magnesium sulfate. After the solvent was distilled away under reduced pressure, the residue was purified by column chromatography (silica gel, chloroform, Rf= 0.4) to obtain a yellow solid substance (92.7 mg, 83%). 1H-NMR(400MHz,CDCl3)δ10.07(s,1H),8.12(s,1H), 7.56-7.5 (m,4H); 13C-NMR(99.5MHz,CDCl3)δ183.9, 141.9, 136.5, 135.4, 132.5, 132.2, 131.9, 131.1, 130.7, 126.0, 125.8, 122.6, 122.41; M.S.(70eVEI)m/z=274(M+) |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Example 14 Alkylation reaction of <strong>[29150-63-8]BTT</strong> via lithiation [Show Image] Under a nitrogen atmosphere, in a 50 mL three-neck flask, benzo[1,2-b:4,5-b':5,6-b"]trithiophene (Scheme -(2)) (800 mg, 3.25 mmol) obtained in Synthesis Example 3 and tetrahydrofuran (22.7 mL) were placed and cooled to 0C. To this, a 1.59 mol/l n-butyllithium hexane solution (4. 5mL, 7.15 mmol) was added and stirred for 2 hours. Thereafter, temperature was increased to 60C. To the mixture, n-octyl bromide (2.5 g, 13.0 mmol) was added and reacted for 12 hours. After completion of the reaction, water (20 mL) was added. A precipitated solid substance was obtained by filtration, washed with water (20 mL) to obtain a light yellow substance. The resultant solid substance was separated and analyzed by HPLC. As a result, it was found that a production ratio of raw materials (Scheme 1-(2)):1030:1031:1032 is 3:29:39:21. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With aluminum (III) chloride; In dichloromethane; at -78℃; for 2h;Inert atmosphere; | Example 15 Acylation reaction of <strong>[29150-63-8]BTT</strong> via the Friedel-Crafts reaction [Show Image] Under a nitrogen atmosphere, in a 50 mL three-neck flask benzo[1,2-b:4,5-b': 5,6-b"]trithiophene (Scheme 1-(2)) (800 mg, 3.25 mmol), obtained in Synthesis Example 3 and methylene chloride (22.7 mL) were placed and cooled to -78C. To this, aluminum chloride (2.11 g, 13.0 mmol) and octanoyl chloride (1.16 g, 13.0 mmol) were added and stirred for 2 hours and then temperature was increased to room temperature. After completion of the reaction, water (20 mL) was added. A precipitated solid substance was obtained by filtration, washed with water (20 mL) to obtain a light yellow solid substance. The resultant solid substance was separated and analyzed by HPLC. As a result, it was found that a production ratio of 1033:1034 is 21:32. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With N-Bromosuccinimide; In dichloromethane; acetic acid; at 20℃; for 24h;Inert atmosphere; Darkness; | Example 16 Dibromination reaction of <strong>[29150-63-8]BTT</strong> by NBS bromination reaction [Show Image] Under a nitrogen atmosphere, in a 50 mL three-neck flash, benzo[1,2-b:4,5-b':5,6-b"]trithiophene (Scheme 1-(2)) (800 mg, 3.25 mmol) obtained in Synthesis Example 3, methylene chloride (22.7 mL) and acetic acid (5.7 mL) were added. Under light exclusion conditions, NBS (1.16 g, 6.5 mmol) was added little by little and stirred at room temperature for 24 hours. After completion of the reaction, water (20 mL) was added. A precipitated solid substance was obtained by filtration and washed with ethanol (50 mL) and water (20 mL) to obtain a light purple solid substance. The resultant solid substance was analyzed by HPLC. As a result, it was found that a production ratio of 34:35:33 is 0.01:1:0.17. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
51% | With chloranil; In toluene; for 48h;Reflux; | General procedure: Chloranil and dihydrothiophene derivative were refluxed in toluene. After completion of the reaction (monitored by TLC), the excess of chloranil was removed by mean of vacuum filtration. Then the filtrate was concentrated under reduced pressure to provide the crude product which was subsequently purified by column chromatography (silica gel; hexane as eluent) to afford the desired product. |
49% | With chloranil; In toluene; at 100℃; for 48h;Inert atmosphere; | General procedure: IC-7-4 (20 g, 81.84 mmol) obtained in Step 1 and chloranil (72.25 g, 327.36 mmol) and toluene (400 ml) was stirred in a nitrogen stream for 2 days at 100 C . After the end of reaction vacuum filter to remove the chloranil method, removing the solvent from the filtrate was filtered by column chromatography (Hexane: MC = 5: 1 (v / v)) to give IC-7-3 (14.95 g, yield: 76 %). Instead of IC-7-4 (20 g, 81.84 mmol) the use of IC-12-4 (10 g, 39.62 mmol) the performs the same procedure as Step 2 Preparation Example 7 to obtain a IC-12-3 (9.68 g, yield 49%). |
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