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Structure of Grubbs Catalyst Gen.1
CAS No.: 172222-30-9
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The BI-3802 was designed by Boehringer Ingelheim and could be obtained free of charge through the Boehringer Ingelheim open innovation portal opnMe.com, associated with its negative control.
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CAS No. : | 172222-30-9 |
Formula : | C43H72Cl2P2Ru |
M.W : | 822.96 |
SMILES Code : | [Cl-][Ru+4]([Cl-])([P](C1CCCCC1)(C2CCCCC2)C3CCCCC3)([P](C4CCCCC4)(C5CCCCC5)C6CCCCC6)=[CH-2]C7=CC=CC=C7 |
MDL No. : | MFCD01090946 |
GHS Pictogram: |
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Signal Word: | Danger |
Hazard Statements: | H228 |
Precautionary Statements: | P210-P240-P241-P280-P370+P378 |
Class: | 4.1 |
UN#: | 1325 |
Packing Group: | Ⅱ |
Num. heavy atoms | 48 |
Num. arom. heavy atoms | 6 |
Fraction Csp3 | 0.84 |
Num. rotatable bonds | 7 |
Num. H-bond acceptors | 0.0 |
Num. H-bond donors | 0.0 |
Molar Refractivity | 223.86 |
TPSA ? Topological Polar Surface Area: Calculated from |
27.18 Ų |
Log Po/w (iLOGP)? iLOGP: in-house physics-based method implemented from |
0.0 |
Log Po/w (XLOGP3)? XLOGP3: Atomistic and knowledge-based method calculated by |
13.63 |
Log Po/w (WLOGP)? WLOGP: Atomistic method implemented from |
15.7 |
Log Po/w (MLOGP)? MLOGP: Topological method implemented from |
10.34 |
Log Po/w (SILICOS-IT)? SILICOS-IT: Hybrid fragmental/topological method calculated by |
5.8 |
Consensus Log Po/w? Consensus Log Po/w: Average of all five predictions |
9.09 |
Log S (ESOL):? ESOL: Topological method implemented from |
-13.16 |
Solubility | 0.0000000001 mg/ml ; 0.0 mol/l |
Class? Solubility class: Log S scale |
Insoluble |
Log S (Ali)? Ali: Topological method implemented from |
-14.27 |
Solubility | 0.0 mg/ml ; 0.0 mol/l |
Class? Solubility class: Log S scale |
Insoluble |
Log S (SILICOS-IT)? SILICOS-IT: Fragmental method calculated by |
-4.3 |
Solubility | 0.0415 mg/ml ; 0.0000505 mol/l |
Class? Solubility class: Log S scale |
Moderately soluble |
GI absorption? Gatrointestinal absorption: according to the white of the BOILED-Egg |
Low |
BBB permeant? BBB permeation: according to the yolk of the BOILED-Egg |
No |
P-gp substrate? P-glycoprotein substrate: SVM model built on 1033 molecules (training set) |
Yes |
CYP1A2 inhibitor? Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set) |
No |
CYP2C19 inhibitor? Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set) |
No |
CYP2C9 inhibitor? Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set) |
No |
CYP2D6 inhibitor? Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set) |
No |
CYP3A4 inhibitor? Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set) |
No |
Log Kp (skin permeation)? Skin permeation: QSPR model implemented from |
-1.64 cm/s |
Lipinski? Lipinski (Pfizer) filter: implemented from |
2.0 |
Ghose? Ghose filter: implemented from |
None |
Veber? Veber (GSK) filter: implemented from |
0.0 |
Egan? Egan (Pharmacia) filter: implemented from |
1.0 |
Muegge? Muegge (Bayer) filter: implemented from |
2.0 |
Bioavailability Score? Abbott Bioavailability Score: Probability of F > 10% in rat |
0.17 |
PAINS? Pan Assay Interference Structures: implemented from |
0.0 alert |
Brenk? Structural Alert: implemented from |
1.0 alert: heavy_metal |
Leadlikeness? Leadlikeness: implemented from |
No; 1 violation:MW<2.0 |
Synthetic accessibility? Synthetic accessibility score: from 1 (very easy) to 10 (very difficult) |
6.72 |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
In dichloromethane-d2; at 20℃; for 2h;NMR tube;Reactivity; | In a dry box, a Teflon-sealed n.m.r. tube was charged with (2S)-methyl 2-N-acetylaminopenta-2,4-dienoate 57 (10.8 mg, 63.9 mumol), Grubbs' catalyst (50.7 mg, 61.6 mumol) and degassed deuterated DCM (CD2Cl2, 0.8 mL) at room temperature. The n.m.r. tube was shaken gently and reaction progress was monitored by 1H and 31P n.m.r. spectroscopy. Compounds were identified by the following diagnostic resonances: 1H n.m.r. (300 MHz, CD2Cl2): After 15 min: Grubbs' catalyst: delta 8.61 (d, J=7.6 Hz, 2H, ortho-Arom CH), 20.05 (s, 1H, [Ru]CHPh); Ruthenium-dienamide complex 73: delta 7.96 (d, J=11.0 Hz, 1H, [Ru]CHCH), 20.11 (d, J=11.0 Hz, 1H, [Ru]CH); Ruthenium-dienamide chelate 74 (trace): delta 15.20 (d, J=4.2 Hz, 1H, [Ru]CH); Ratio of ruthenium complexes [Ru]CHPh: 73: 74=1.0:1.0:<0.1. After 60 min: Grubbs' catalyst: delta 8.45 (d, J=7.6 Hz, 2H, ortho-Arom CH), 20.04 (s, 1H, [Ru]CHPh); Ruthenium-dienamide complex 73: delta 7.96 (d, J=11.0 Hz, 1H, [Ru]CH=CH), 20.10 (d, J=11.0 Hz, 1H, [Ru]CH); Ruthenium-dienamide chelate 74: delta 6.73 (d, J=3.0 Hz, 1H, [Ru]CHCH), 15.19 (d, J=4.2 Hz, 1H, [Ru]CH); Ratio of ruthenium complexes [Ru]CHPh: 73: 74=3:1:1. After 120 min (no change after 18 h): Ruthenium-dienamide chelate 74: delta 6.71 (d, J=3.0 Hz, 1H, [Ru]CHCH), 15.19 (d, J=4.0 Hz, 1H, [Ru]CH). 31P n.m.r. (300 MHz, CDCl3): delta Ruthenium-dienamide chelate 74: 35.0; Grubbs' catalyst: 37.0; Ruthenium-dienamide complex 73: 38.8; Tricyclohexylphosphine oxide: 46.5. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
25% | With KOt-Bu(F6); In benzene-d6; at 20℃; for 2.5h; | In a glove box, NHC ligand precursor 23 (162 mg, .34 mmol), ruthenium precursor 5 (150 mg, .27 mmol) and KOt-Bu(Fe) (74 mg, .34 mmol) were combined in C6D6 and stirred at RT for 2.5 hours. The flask was sealed, removed from the glove box and the reaction was concentrated and purified by flash column chromatography (2.5percent - > 5percent Et2psi/Pent) to yield a brown oil. The brown oil was lyophilized from benzene <n="38"/>to give 25 as a brown solid (66 mg, 25percent). 1H NMR (300 MHz3 CDCl3) delta 20.07 (d, J = 10.5 Hz, IH)3 8.03 (br, 2H), 7.60 (t, 1.8 Hz, IH), 6.86-6.81 (ra, 2H), 6.51 - 6.47 (m, IH), 1.81 - 1.07 (m). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
17% | With copper(l) chloride; In dichloromethane; at 30℃; for 1.5h; | A suspension of 3.07 g (3.73 mmol) of [RuCl2(PCy3)2(phenylmethylene)] (commercial available from Sigma-Aldrich Inc., St. Louis, USA), 380 mg (3.84 mmol) copper chloride and 1.06 g (4.10 mmol) 4-chloro-2-trifluoromethyl-8-vinyl-quinoline in 135 ml methylene chloride was stirred at 300C for 90 min. The reaction mixture was evaporated to dryness and the isolated crude product purified by silica gel chromatography (hexane / ethyl acetat 2:1) and finally digested in 50 ml pentane at room temperature for 30 min to yield 429 mg (17percent) of the title compound as dark green crystals. MS: 697.0 (M+). 31P-NMR (121 MHz, C6D6): 54.2 ppm. 1H-NMR (300 MHz, C6D6): 1.18-2.35 (m, 30H); 2.60 (q, J=12.0Hz, 3H); 6.82 (t, J=6.0Hz, IH); 7.01 (d, J=3.0Hz, IH); 7.55 (d, J= 6.0Hz, IH); 7.89 (d, J=6.0Hz, IH); 17.80-17.90 (m, IH). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
In dichloromethane; for 8h; | This example shows the synthesis of a polystyrene copolymer comprising the Ti(NMe2)2(mnpm) catalyst. The synthesis involved two steps (1) the synthesis of vinyl polystyrene comprising Ru(PCy3)2Cl2 (ruthenated polystyrene) as an intermediate per Roberts et al., Organic Letts. 67: 1083-1086 (1999) and using the intermediate to make the polystyrene copolymer comprising the Ti(NMe2)2(mnpm). [0103] In the first step, in an inert atmosphere dry box under purified N2, to a suspension of 1.0131 g vinyl polystyrene (Novabiochem, 1.22.x.10-3 moles) in about 10 mL of CH2Cl2 in a vial was added a solution of 0.0798 g Cl2Ru(PCy3)2(CHPh) in about 2 mL CH2Cl2 (9.70.x.10-5 moles, 7.95percent mole). The solution was stirred for about 8 hours and the resulting purple-brown solid was collected on a fritted funnel. The solid was washed well with CH2Cl2 and placed back into a vial and suspended in about 12 mL CH2Cl2. [0104] In the second step, to the solid from above was added a solution of 0.6796 g norborene (7.22.x.10-3 moles) and 0.0655 g Ti(NMe2)2(mnpm) (1.59.x.10-4 moles, 47:1 norbornene: Ti(NMe2)2(mnpm). The solution and solid was stirred overnight, then filtered, washed twice with CH2Cl2 (30 mL each wash), washed twice with ether (30 mL each wash), washed twice with pentene (30 mL each wash), and dried in vacuo. The yield was 1.631 g (92.8percent mass conversion). The Ti(NMe3) 2 (mnpm) loading was 1.54.x.10 4 mole Ti in 1.631 g of polymer (9.44.x.10-5 mole/g). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
56% | In toluene; benzene; at 20℃; for 3h; | Treatment of compound 1 a (Figure 1) with TlOC6F5 effected quantitative conversion to four-coordinate alkylidyne compound 4c (Figure 1, Scheme 2) within 3 hours at room temperature. The reaction is carried out under N2 at room temperature using standard Schlenk or drybox techniques and dry, oxygen-free solvents. Addition of TlOC6F5 (566 mg, 1.46 mmol) in 7 mL toluene to a purple solution of RuCl2(CHPh)(PCy3) 2 (600 mg, 0.73 mmol) in 7 mL benzene resulted in quantitative reaction (as judged by NMR analysis) within 3 h, accompanied by a colour change to dark green. The suspension was filtered through Celite.(TM). and the filtrate concentrated to dryness. On redissolving the residue in cold (-35°C) ether, a green powder of 4c slowly deposited. This was filtered off and washed with cold ether. Yield 395 mg (56percent); isolated yields are limited by high solubility in ether. Characterization data :1H NMR (C6D6,298K) delta 7. 68 (d, 2H, JHH = 7.6 Hz, Ph o- CH), 6.97 (t, 1H, JHH = 7.5, Ph p-CH), 6.75 (t, 2H, JHH = 7.9, Ph m-CH), 2.23-2.18 (m, 8H, Cy), 1.94-1.54 (m, 36H, Cy), 1.30-1.15 (m, 8H, Cy), 1.08-0.90 (m, 8H, Cy). 31P {1H} NMR (C6D6,298K) delta 42.59 (s). 13C {1H} NMR (C6D6, 298K) delta 250.2 (RuCPh, located by HMBC), 153-125 (CF, CH), 35.6-26.6 (CH2). 19F {1H} NMR (C6D6, 298K) delta -90. 27 (dd, 2F, JFF = 11.3, 22.6 Hz), -93.35 (t, 2F, JFF = 22.1 Hz), -106.73 to-106.98 (m, 1F). Anal. Calcd. for C49H71F5OP2Ru : C, 63.00 ; H, 7.66percent. Found: C, 62.74 ; H, 8.12percent. Crystals deposited from benzene solution. The complex was isolated as a green, air-stable, ether-soluble powder; yields were limited to ca. 60percent by its high solubility. The approximately square planar molecular structure (Figure 2) closely resembles that reported for compound 4b (Ref. 11). Formation of compound 4c despite the acidity of the perfluorophenol coproduct implies a powerful driving force for the reaction. Modelling studies point towards steric crowding within the five-coordinate intermediate (cf. Compound 3, see Figure 1), sufficient to promote interaction between the alkylidene proton and the phenoxide oxygen. This is ultimately relieved by elimination of perfluoroalcohol. Failure to observe the corresponding reaction for the t-butoxide system (Ref. 11,12) despite the thermodynamically more favourable liberation of t-butanol, is consistent with prohibition of the alkylidene-alkoxide interaction by the bulk of the t-butyl substituent. Relief of steric pressure can then only be accommodated by phosphine loss. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
97% | With copper(l) chloride; In dichloromethane; for 2h;Heating / reflux; | A mixture of phosphonium (14) (225 mg, 0.30 mmol, 1.0 equiv), Grubbs first generation catalyst (Cl2Ru(PCy3)=CHPh) (305 mg, 0.36 mmol, 1.2 equiv), CuCl (27 mg, 0.27,0.9 equiv) and CH2Cl2 (15 mL, 0.02 M) were heated under reflux for 2 h under argon. The mixture was concentred under reduced pressure. The crude product was diluted with CH2C12 (2.5 ml) and was precipitated with EtzO (20 mL). This operation was repeated four times to afford pure catalyst (10) (350 mg, 97percent) as a solid green foam, has been characterized has follows: 1H NMR (400 MHz, CDCl3) 817.38 (d, J = 4.5 Hz, 1H), 7.95 (dd, J = 3.1,8.4 Hz, 2H), 7.89-7.85 (m, 3H), 7.78-7.74 (m, 6H), 7.71-7.87 (m, 10H), 7.58 (d, J = 8.2 Hz, 2H), 7.33 (d, J = 2.9 Hz, 1H), 7.28 (dd, J = 2.9, 8.9 Hz, 1 H), 6.99 (d, J = 8.9 Hz, 1 H), 5.19 (sept, J = 6.1 Hz, 1H), 5.16 (s, 2H), 2.33 (br q, J = 12.1 Hz, 3H), 2.12-2.07 (m, 6H), 1.92-1.81 (m, 12H), 1.77 (d, J = 6.1 Hz, 6H), 1.73-1.68 (m, 3H), 1.29-1.25 (m, 9H). 13C NMR (100 MHz, CDC13) # 278.6 (s), 154.0 (s), 147.5 (d, J= 2.8 Hz), 147.1 (s), 143.9 (s), 138.0 (s), 137.6 (s), 135.4 (d, J= 3.1 Hz), 134.7 (d, J= 10.5 Hz), 134.1 (d, J = 10.2 Hz), 130.5 (d, J = 12.8 Hz), 128.8 (d, J = 13.1 Hz), 128.0 (s), 127.5 (s), 117.3 (d, J = 89.0 Hz), 116.1 (s), 115.4 (d, J = 90.6 Hz), 113.7 (s), 75.3 (s), 70.2 (s), 35.3 (d, J= 24.7 Hz), 29.9 (s), 27.5 (d, J= 10.3 Hz), 26.1 (s), 21.8 (s). 31P (162 MHZ, CDC13) 8 58.7, 23.1, -143,9 (sept, J = 713 Hz).. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With copper(l) chloride; | EXAMPLE 1 Metathesis by Ethenolysis of Methyl Oleate Catalyzed by a Type 3 Complex (FIG. 1) in an Ionic Liquid; 1 ml of 3-butyl-1,2-dimethylimidazolium bis-triflylamide with formula [BMMI]+[N(CF3SO2)2]- pre-dried overnight at 80° C., 148 mg of methyl oleate (source: Fluka, with a purity higher than 98percent) and 15 mg of the complex with formula Cl2Ru(CH-o-O-iPrC6H4)PCy3 (synthesized by reacting the 1st generation Grubbs complex with formula Cl2Ru(CHC6H5)(PCy3)2 with 1-isopropoxy-2-vinylbenzene in the presence of CuCl), this corresponding to 5percent molar of catalyst with respect to methyl oleate, were introduced, in an inert atmosphere of argon, into an autoclave reactor provided with an agitation system and a pressure sensor. The autoclave was then placed under vacuum and pressurized to obtain a pressure of 10 bars (1 MPa) of ethylene (origin: Alphagas, quality N25). The temperature was kept constant at 20° C. The medium was stirred at ambient temperature for 2 hours, then the excess ethylene was slowly purged by returning to atmosphere pressure at a temperature not exceeding 20° C. and the autoclave was again placed under an atmosphere of argon. The products were separated from the ionic liquid by adding 2 to 3 ml of heptane distilled over CaH2 and degassed. An aliquot (100 mul) of the extracted solution was passed through a short silica column (2 cm) eluted with diethyl ether. It was analyzed by gas phase chromatography (ZB-1 column, 100percent dimethylpolysiloxane, 30 metres, helium vector gas 2 ml/min, temperature programming: 60° C. then 5° C./min to 220° C.) coupled to a mass spectrometer. The methyl oleate conversion was 95percent. It was calculated using decane as an internal reference. The reaction products were composed of 1-decene (fraction A) and methyl decenoate (fraction B). The presence of 1-decene isomers was not detected. Homo-metathesis products were present in trace amounts and could not be quantified. |