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Chemical Structure| 167298-40-0 Chemical Structure| 167298-40-0

Structure of 167298-40-0

Chemical Structure| 167298-40-0

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Product Details of [ 167298-40-0 ]

CAS No. :167298-40-0
Formula : C10H17NO3
M.W : 199.25
SMILES Code : O=C(OC(C)(C)C)N[C@@H]1CC(CC1)=O
MDL No. :MFCD18089809
InChI Key :CLOXAWYNXXEWBT-ZETCQYMHSA-N
Pubchem ID :45091924

Safety of [ 167298-40-0 ]

GHS Pictogram:
Signal Word:Warning
Hazard Statements:H302-H315-H319
Precautionary Statements:P261-P305+P351+P338

Computational Chemistry of [ 167298-40-0 ] Show Less

Physicochemical Properties

Num. heavy atoms 14
Num. arom. heavy atoms 0
Fraction Csp3 0.8
Num. rotatable bonds 4
Num. H-bond acceptors 3.0
Num. H-bond donors 1.0
Molar Refractivity 52.78
TPSA ?

Topological Polar Surface Area: Calculated from
Ertl P. et al. 2000 J. Med. Chem.

55.4 Ų

Lipophilicity

Log Po/w (iLOGP)?

iLOGP: in-house physics-based method implemented from
Daina A et al. 2014 J. Chem. Inf. Model.

2.06
Log Po/w (XLOGP3)?

XLOGP3: Atomistic and knowledge-based method calculated by
XLOGP program, version 3.2.2, courtesy of CCBG, Shanghai Institute of Organic Chemistry

0.81
Log Po/w (WLOGP)?

WLOGP: Atomistic method implemented from
Wildman SA and Crippen GM. 1999 J. Chem. Inf. Model.

1.63
Log Po/w (MLOGP)?

MLOGP: Topological method implemented from
Moriguchi I. et al. 1992 Chem. Pharm. Bull.
Moriguchi I. et al. 1994 Chem. Pharm. Bull.
Lipinski PA. et al. 2001 Adv. Drug. Deliv. Rev.

0.76
Log Po/w (SILICOS-IT)?

SILICOS-IT: Hybrid fragmental/topological method calculated by
FILTER-IT program, version 1.0.2, courtesy of SILICOS-IT, http://www.silicos-it.com

1.18
Consensus Log Po/w?

Consensus Log Po/w: Average of all five predictions

1.29

Water Solubility

Log S (ESOL):?

ESOL: Topological method implemented from
Delaney JS. 2004 J. Chem. Inf. Model.

-1.32
Solubility 9.5 mg/ml ; 0.0477 mol/l
Class?

Solubility class: Log S scale
Insoluble < -10 < Poorly < -6 < Moderately < -4 < Soluble < -2 Very < 0 < Highly

Very soluble
Log S (Ali)?

Ali: Topological method implemented from
Ali J. et al. 2012 J. Chem. Inf. Model.

-1.56
Solubility 5.55 mg/ml ; 0.0279 mol/l
Class?

Solubility class: Log S scale
Insoluble < -10 < Poorly < -6 < Moderately < -4 < Soluble < -2 Very < 0 < Highly

Very soluble
Log S (SILICOS-IT)?

SILICOS-IT: Fragmental method calculated by
FILTER-IT program, version 1.0.2, courtesy of SILICOS-IT, http://www.silicos-it.com

-1.88
Solubility 2.61 mg/ml ; 0.0131 mol/l
Class?

Solubility class: Log S scale
Insoluble < -10 < Poorly < -6 < Moderately < -4 < Soluble < -2 Very < 0 < Highly

Soluble

Pharmacokinetics

GI absorption?

Gatrointestinal absorption: according to the white of the BOILED-Egg

High
BBB permeant?

BBB permeation: according to the yolk of the BOILED-Egg

Yes
P-gp substrate?

P-glycoprotein substrate: SVM model built on 1033 molecules (training set)
and tested on 415 molecules (test set)
10-fold CV: ACC=0.72 / AUC=0.77
External: ACC=0.88 / AUC=0.94

No
CYP1A2 inhibitor?

Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set)
and tested on 3000 molecules (test set)
10-fold CV: ACC=0.83 / AUC=0.90
External: ACC=0.84 / AUC=0.91

No
CYP2C19 inhibitor?

Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set)
and tested on 3000 molecules (test set)
10-fold CV: ACC=0.80 / AUC=0.86
External: ACC=0.80 / AUC=0.87

No
CYP2C9 inhibitor?

Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set)
and tested on 2075 molecules (test set)
10-fold CV: ACC=0.78 / AUC=0.85
External: ACC=0.71 / AUC=0.81

No
CYP2D6 inhibitor?

Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set)
and tested on 1068 molecules (test set)
10-fold CV: ACC=0.79 / AUC=0.85
External: ACC=0.81 / AUC=0.87

No
CYP3A4 inhibitor?

Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set)
and tested on 2579 molecules (test set)
10-fold CV: ACC=0.77 / AUC=0.85
External: ACC=0.78 / AUC=0.86

No
Log Kp (skin permeation)?

Skin permeation: QSPR model implemented from
Potts RO and Guy RH. 1992 Pharm. Res.

-6.94 cm/s

Druglikeness

Lipinski?

Lipinski (Pfizer) filter: implemented from
Lipinski CA. et al. 2001 Adv. Drug Deliv. Rev.
MW ≤ 500
MLOGP ≤ 4.15
N or O ≤ 10
NH or OH ≤ 5

0.0
Ghose?

Ghose filter: implemented from
Ghose AK. et al. 1999 J. Comb. Chem.
160 ≤ MW ≤ 480
-0.4 ≤ WLOGP ≤ 5.6
40 ≤ MR ≤ 130
20 ≤ atoms ≤ 70

None
Veber?

Veber (GSK) filter: implemented from
Veber DF. et al. 2002 J. Med. Chem.
Rotatable bonds ≤ 10
TPSA ≤ 140

0.0
Egan?

Egan (Pharmacia) filter: implemented from
Egan WJ. et al. 2000 J. Med. Chem.
WLOGP ≤ 5.88
TPSA ≤ 131.6

0.0
Muegge?

Muegge (Bayer) filter: implemented from
Muegge I. et al. 2001 J. Med. Chem.
200 ≤ MW ≤ 600
-2 ≤ XLOGP ≤ 5
TPSA ≤ 150
Num. rings ≤ 7
Num. carbon > 4
Num. heteroatoms > 1
Num. rotatable bonds ≤ 15
H-bond acc. ≤ 10
H-bond don. ≤ 5

1.0
Bioavailability Score?

Abbott Bioavailability Score: Probability of F > 10% in rat
implemented from
Martin YC. 2005 J. Med. Chem.

0.55

Medicinal Chemistry

PAINS?

Pan Assay Interference Structures: implemented from
Baell JB. & Holloway GA. 2010 J. Med. Chem.

0.0 alert
Brenk?

Structural Alert: implemented from
Brenk R. et al. 2008 ChemMedChem

0.0 alert: heavy_metal
Leadlikeness?

Leadlikeness: implemented from
Teague SJ. 1999 Angew. Chem. Int. Ed.
250 ≤ MW ≤ 350
XLOGP ≤ 3.5
Num. rotatable bonds ≤ 7

No; 1 violation:MW<1.0
Synthetic accessibility?

Synthetic accessibility score: from 1 (very easy) to 10 (very difficult)
based on 1024 fragmental contributions (FP2) modulated by size and complexity penaties,
trained on 12'782'590 molecules and tested on 40 external molecules (r2 = 0.94)

2.55

Application In Synthesis of [ 167298-40-0 ]

* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.

  • Downstream synthetic route of [ 167298-40-0 ]

[ 167298-40-0 ] Synthesis Path-Downstream   1~28

  • 1
  • [ 40481-13-8 ]
  • [ 167298-40-0 ]
  • [(1S,3R)-3-(4-Cyano-4-phenyl-piperidin-1-yl)-cyclopentyl]-carbamic acid tert-butyl ester [ No CAS ]
  • [(1S,3S)-3-(4-Cyano-4-phenyl-piperidin-1-yl)-cyclopentyl]-carbamic acid tert-butyl ester [ No CAS ]
  • 2
  • [ 30532-37-7 ]
  • [ 167298-40-0 ]
  • [3-(3',4',5',6'-tetrahydro-2'<i>H</i>-[2,4']bipyridinyl-1'-yl)-cyclopentyl]-carbamic acid <i>tert</i>-butyl ester [ No CAS ]
  • [3-(3',4',5',6'-tetrahydro-2'<i>H</i>-[2,4']bipyridinyl-1'-yl)-cyclopentyl]-carbamic acid <i>tert</i>-butyl ester [ No CAS ]
  • 3
  • [ 111373-03-6 ]
  • [ 167298-40-0 ]
  • {(1S,3R)-3-[4-(2-Cyano-phenyl)-piperazin-1-yl]-cyclopentyl}-carbamic acid tert-butyl ester [ No CAS ]
  • {(1S,3S)-3-[4-(2-Cyano-phenyl)-piperazin-1-yl]-cyclopentyl}-carbamic acid tert-butyl ester [ No CAS ]
  • 4
  • [ 304462-63-3 ]
  • [ 167298-40-0 ]
  • {(1S,3R)-3-[4-(2-Cyano-phenyl)-piperidin-1-yl]-cyclopentyl}-carbamic acid tert-butyl ester [ No CAS ]
  • {(1S,3S)-3-[4-(2-Cyano-phenyl)-piperidin-1-yl]-cyclopentyl}-carbamic acid tert-butyl ester [ No CAS ]
  • 5
  • [ 167465-99-8 ]
  • [ 167298-40-0 ]
  • 6
  • [ 167298-40-0 ]
  • (1S,3R)-3-(3',4',5',6'-Tetrahydro-2'H-[2,4']bipyridinyl-1'-yl)-cyclopentylamine [ No CAS ]
  • 7
  • [ 167298-40-0 ]
  • (1S,3S)-3-(3',4',5',6'-Tetrahydro-2'H-[2,4']bipyridinyl-1'-yl)-cyclopentylamine [ No CAS ]
  • 8
  • [ 167298-40-0 ]
  • 2-[1-((1R,3S)-3-Amino-cyclopentyl)-piperidin-4-yl]-benzonitrile [ No CAS ]
  • 9
  • [ 167298-40-0 ]
  • 2-[1-((1S,3S)-3-Amino-cyclopentyl)-piperidin-4-yl]-benzonitrile [ No CAS ]
  • 10
  • [ 167298-40-0 ]
  • 1-((1R,3S)-3-Amino-cyclopentyl)-4-phenyl-piperidine-4-carbonitrile [ No CAS ]
  • 11
  • [ 167298-40-0 ]
  • 1-((1S,3S)-3-Amino-cyclopentyl)-4-phenyl-piperidine-4-carbonitrile [ No CAS ]
  • 12
  • [ 167298-40-0 ]
  • 2-[4-((1R,3S)-3-Amino-cyclopentyl)-piperazin-1-yl]-benzonitrile [ No CAS ]
  • 13
  • [ 167298-40-0 ]
  • 2-[4-((1S,3S)-3-Amino-cyclopentyl)-piperazin-1-yl]-benzonitrile [ No CAS ]
  • 14
  • [ 167298-40-0 ]
  • (S)-4-(3,4-Difluoro-phenyl)-6-methoxymethyl-2-oxo-3-[(1S,3R)-3-(3',4',5',6'-tetrahydro-2'H-[2,4']bipyridinyl-1'-yl)-cyclopentylcarbamoyl]-1,2,3,4-tetrahydro-pyrimidine-5-carboxylic acid methyl ester [ No CAS ]
  • 15
  • [ 167298-40-0 ]
  • (S)-4-(3,4-Difluoro-phenyl)-6-methoxymethyl-2-oxo-3-[(1S,3S)-3-(3',4',5',6'-tetrahydro-2'H-[2,4']bipyridinyl-1'-yl)-cyclopentylcarbamoyl]-1,2,3,4-tetrahydro-pyrimidine-5-carboxylic acid methyl ester [ No CAS ]
  • 16
  • [ 167298-40-0 ]
  • (S)-3-[(1S,3R)-3-(4-Cyano-4-phenyl-piperidin-1-yl)-cyclopentylcarbamoyl]-4-(3,4-difluoro-phenyl)-6-methoxymethyl-2-oxo-1,2,3,4-tetrahydro-pyrimidine-5-carboxylic acid methyl ester [ No CAS ]
  • 17
  • [ 167298-40-0 ]
  • (S)-3-[(1S,3S)-3-(4-Cyano-4-phenyl-piperidin-1-yl)-cyclopentylcarbamoyl]-4-(3,4-difluoro-phenyl)-6-methoxymethyl-2-oxo-1,2,3,4-tetrahydro-pyrimidine-5-carboxylic acid methyl ester [ No CAS ]
  • 18
  • [ 167298-40-0 ]
  • (S)-3-{(1S,3R)-3-[4-(2-Cyano-phenyl)-piperidin-1-yl]-cyclopentylcarbamoyl}-4-(3,4-difluoro-phenyl)-6-methoxymethyl-2-oxo-1,2,3,4-tetrahydro-pyrimidine-5-carboxylic acid methyl ester [ No CAS ]
  • 19
  • [ 167298-40-0 ]
  • (S)-3-{(1S,3S)-3-[4-(2-Cyano-phenyl)-piperidin-1-yl]-cyclopentylcarbamoyl}-4-(3,4-difluoro-phenyl)-6-methoxymethyl-2-oxo-1,2,3,4-tetrahydro-pyrimidine-5-carboxylic acid methyl ester [ No CAS ]
  • 20
  • [ 167298-40-0 ]
  • (S)-3-{(1S,3R)-3-[4-(2-Cyano-phenyl)-piperazin-1-yl]-cyclopentylcarbamoyl}-4-(3,4-difluoro-phenyl)-6-methoxymethyl-2-oxo-1,2,3,4-tetrahydro-pyrimidine-5-carboxylic acid methyl ester [ No CAS ]
  • 21
  • [ 167298-40-0 ]
  • (S)-3-{(1S,3S)-3-[4-(2-Cyano-phenyl)-piperazin-1-yl]-cyclopentylcarbamoyl}-4-(3,4-difluoro-phenyl)-6-methoxymethyl-2-oxo-1,2,3,4-tetrahydro-pyrimidine-5-carboxylic acid methyl ester [ No CAS ]
  • 22
  • [ 225641-82-7 ]
  • [ 167298-40-0 ]
YieldReaction ConditionsOperation in experiment
Preparation 45 (S)-(3-Oxocyclopentyl)carbamic acid 1,1-dimethylethyl ester 2.5M n-Butyllithium in hexane (5.83 ml) was added dropwise to a stirred solution of 1,1,1,3,3,3-hexamethyldisilazane (3.16 ml, 15 mmol) in tetrahydrofuran (30 ml) at 4 C. After 20 min the solution was cooled to -60 C. and (S)-3-[[(1,1-dimethylethoxy)carbonyl]amino]-hexanedioic acid 1-methyl 6-(phenylmethyl) ester (1.522 g, 4.16 mmol) in tetrahydrofuran (10 ml) was added dropwise over 5 min. The solution was stirred for 10 min before the addition of pH7 buffer (5 ml) and the mixture was then diluted with dichloromethane (200 ml) and pH7 buffer (300 ml). The aqueous phase was adjusted to pH6.5 with 2M hydrochloric acid and then the organic phase was separated. The aqueous phase was extracted with dichloromethane (2*200 ml) and the combined organic phase was dried (MgSO4) then evaporated to leave a solid. The solid was dissolved in ethanol (45 ml) and hydrogenated over 10% palladium-on-carbon (0.5 g) for 4 h. The hydrogen was replaced by nitrogen and the reaction was stirred for a further 18 h then filtered through celite and the pad was washed with ethanol. The filtrate and washings were combined and evaporated to leave a solid which was purified by column chromatography on flash silica eluding with 25-40% ethyl acetate in cyclohexane to give the title compound (0.437 g) as a white solid which crystallized from isopropyl ether, m.p. 97-98 C., [alpha]D -48 (CHCl3 c=0.52%).
  • 24
  • [ 60217-34-7 ]
  • [ 167298-40-0 ]
  • trans-(+/-)-(3-hydroxycyclopentyl)-carbamic acid,1,1-dimethylethyl ester [ No CAS ]
YieldReaction ConditionsOperation in experiment
In tetrahydrofuran; cyclohexane; water; Preparation 46 (1S-trans)-(3-Hydroxycyclopentyl)carbamic acid 1,1-dimethylethyl ester A 1M solution of lithium tris(1,2-dimethylpropyl)borohydride in tetrahydrofuran (1.99 ml) was diluted with tetrahydrofuran (3 ml), cooled to -78 C. and treated dropwise with a solution of (S-3-oxocyclopentyl)carbamic acid 1,1-dimethylethyl ester (0.38 g, 1.66 mmol) in dry tetrahydrofuran (2 ml) at 0 C. The reaction was stirred for 2 h at -78 C. then allowed to warm to room temperature over 1 h. Water (2 ml) was added dropwise then the mixture was diluted with water (20 ml) and ethyl acetate (30 ml). The organic phase was washed with water (20 ml), dried (MgSO4) and evaporated to give impure product which was purified by chromatography on flash silica eluding initially with 15% ethyl acetate in cyclohexane and progressing to neat ethyl acetate. Early fractions gave (1S-cis)-(3-hydroxycyclopentyl)carbamic acid 1,1-dimethylethyl ester (0.16 g) as an oil, nmr (d,CDCl3) 1.43(s,9H), 1.50-2.10(m,6H), 3.97-4.10(m,1H), 4.32-4.40(m,1~H), 5.00-5.12(m,1H).
  • 25
  • [ 889126-43-6 ]
  • [ 167298-40-0 ]
  • tert-butyl {(1S)-3-[(3S,45)-4-{(1R)-l-[3,5-bis(trifluoromethyl)phenyl]ethoxy}-3-(4-fluorophenyl)piperidin-1-yl]cyclopentyl}carbamate [ No CAS ]
  • tert-butyl{(1S)-3-[(3S,45)-4-{(1R)-l-[3,5-bis(trifluoromethyl)phenyl]ethoxy}-3-(4-fluorophenyl)piperidin-1-yl]cyclopentyl}carbamate [ No CAS ]
YieldReaction ConditionsOperation in experiment
The HCl form of the intermediate in example 1 step E (72mg, 0.1529mmol) in 2.5mL 1,2-dichloroethane was treated with 98.8mg diisopropylethylamine (0.7645mmol). After 5 minutes, 35mg of tert-butyl [(16)-3-oxocyclopentyl]carbamate (0.1759mmol) and 49mg sodium triacetoxyborohydride (0.2293mmol) were added. The reaction was quenched with a saturated solution of NaHCO3. After 20 min, the aqueous layer was extracted several times with EtOAc. The combined organic layers were washed with brine and dried over Na2SO4, filtered, and concentrated in vacuo. The crude residue was purified on silica gel plates and eluted with 70/15/13/2 EtOAc/acetonitrile/ H2theta/methanol. The faster moving diastereomer was called Dl and the slower moving diastereomer was called D2. MS: Dl(MH)+ 619; D2(MH)+ 619.
  • 26
  • [ 167298-40-0 ]
  • [ 1443928-76-4 ]
  • 27
  • [ 167298-40-0 ]
  • [ 1443930-15-1 ]
  • 28
  • [ 20808-12-2 ]
  • [ 167298-40-0 ]
  • [ 1443930-14-0 ]
  • C17H24FNO5S [ No CAS ]
YieldReaction ConditionsOperation in experiment
330 mg; 102 mg With lithium hexamethyldisilazane; at -78 - 20℃; Example 25 A THF (17 mL) solution of (fluoromethylsulfonyl)benzene (852.4 mg, 4.9 mmol) was treated drop-wise with 1 M LiHMDS/THF (4.8 mL, 4.8 mmol) at -78 C followed by the drop-wise addition of a THF (3mL) solution of compound 11 (440 mg, 2.21 mmol). Initial evaluation of reaction progress by silica gel TLC after 67 min. indicated significant 1 remained. The reaction was warmed slightly before recooling to -78 C and adding additional LiHMDS (2.4 mL) solution drop-wise and allowing the reaction bath to warm to ambient temperature, at which time the reaction had consumed all of compound 1 . After the addition of 1 mL of HOAc and an approximately equal volume of THF the reaction was evaporated (in vacuo) at 30 C before partitioning between DCM and water. Combined DCM phases after an extraction of the initial aqueous phase with DCM were washed with brine, dried Na2SO4, and evaporated. Isolation and purification of compound 2 was accomplished via flash chromatography (silica gel, DCM/ethyl acetate) affording 330 mg. An alternate isomer (presumed trans) was further eluted affording 102 mg. H and 9F spectra (CDCI3) were consistent with expectations.
 

Historical Records

Technical Information

• Acyl Group Substitution • Baeyer-Villiger Oxidation • Barbier Coupling Reaction • Baylis-Hillman Reaction • Bouveault-Blanc Reduction • Bucherer-Bergs Reaction • Buchwald-Hartwig C-N Bond and C-O Bond Formation Reactions • Catalytic Hydrogenation • Chan-Lam Coupling Reaction • Clemmensen Reduction • Complex Metal Hydride Reductions • Corey-Bakshi-Shibata (CBS) Reduction • Corey-Chaykovsky Reaction • Ester Cleavage • Fischer Indole Synthesis • Grignard Reaction • Halogenation • Heat of Combustion • Henry Nitroaldol Reaction • Horner-Wadsworth-Emmons Reaction • Hydride Reductions • Lawesson's Reagent • Leuckart-Wallach Reaction • Mannich Reaction • McMurry Coupling • Meerwein-Ponndorf-Verley Reduction • Passerini Reaction • Paternò-Büchi Reaction • Petasis Reaction • Peterson Olefination • Pictet-Spengler Tetrahydroisoquinoline Synthesis • Preparation of Aldehydes and Ketones • Preparation of Amines • Prins Reaction • Reactions of Aldehydes and Ketones • Reactions of Amines • Reactions with Organometallic Reagents • Reformatsky Reaction • Robinson Annulation • Schlosser Modification of the Wittig Reaction • Schmidt Reaction • Specialized Acylation Reagents-Carbodiimides and Related Reagents • Specialized Acylation Reagents-Ketenes • Specialized Acylation Reagents-Vilsmeier Reagent • Stobbe Condensation • Tebbe Olefination • Ugi Reaction • Wittig Reaction • Wolff-Kishner Reduction

Categories

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[ 167298-40-0 ]

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