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Chemical Structure| 151978-58-4 Chemical Structure| 151978-58-4

Structure of 151978-58-4

Chemical Structure| 151978-58-4

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Product Details of [ 151978-58-4 ]

CAS No. :151978-58-4
Formula : C11H19NO2
M.W : 197.27
SMILES Code : O=C(OC(C)(C)C)NCCCCC#C
MDL No. :MFCD18839148
InChI Key :QUIDQZORWGPNKV-UHFFFAOYSA-N
Pubchem ID :11830384

Safety of [ 151978-58-4 ]

GHS Pictogram:
Signal Word:Warning
Hazard Statements:H302
Precautionary Statements:P280-P305+P351+P338

Computational Chemistry of [ 151978-58-4 ] Show Less

Physicochemical Properties

Num. heavy atoms 14
Num. arom. heavy atoms 0
Fraction Csp3 0.73
Num. rotatable bonds 7
Num. H-bond acceptors 2.0
Num. H-bond donors 1.0
Molar Refractivity 57.67
TPSA ?

Topological Polar Surface Area: Calculated from
Ertl P. et al. 2000 J. Med. Chem.

38.33 Ų

Lipophilicity

Log Po/w (iLOGP)?

iLOGP: in-house physics-based method implemented from
Daina A et al. 2014 J. Chem. Inf. Model.

2.8
Log Po/w (XLOGP3)?

XLOGP3: Atomistic and knowledge-based method calculated by
XLOGP program, version 3.2.2, courtesy of CCBG, Shanghai Institute of Organic Chemistry

2.22
Log Po/w (WLOGP)?

WLOGP: Atomistic method implemented from
Wildman SA and Crippen GM. 1999 J. Chem. Inf. Model.

2.39
Log Po/w (MLOGP)?

MLOGP: Topological method implemented from
Moriguchi I. et al. 1992 Chem. Pharm. Bull.
Moriguchi I. et al. 1994 Chem. Pharm. Bull.
Lipinski PA. et al. 2001 Adv. Drug. Deliv. Rev.

2.29
Log Po/w (SILICOS-IT)?

SILICOS-IT: Hybrid fragmental/topological method calculated by
FILTER-IT program, version 1.0.2, courtesy of SILICOS-IT, http://www.silicos-it.com

2.0
Consensus Log Po/w?

Consensus Log Po/w: Average of all five predictions

2.34

Water Solubility

Log S (ESOL):?

ESOL: Topological method implemented from
Delaney JS. 2004 J. Chem. Inf. Model.

-2.0
Solubility 1.97 mg/ml ; 0.01 mol/l
Class?

Solubility class: Log S scale
Insoluble < -10 < Poorly < -6 < Moderately < -4 < Soluble < -2 Very < 0 < Highly

Very soluble
Log S (Ali)?

Ali: Topological method implemented from
Ali J. et al. 2012 J. Chem. Inf. Model.

-2.66
Solubility 0.432 mg/ml ; 0.00219 mol/l
Class?

Solubility class: Log S scale
Insoluble < -10 < Poorly < -6 < Moderately < -4 < Soluble < -2 Very < 0 < Highly

Soluble
Log S (SILICOS-IT)?

SILICOS-IT: Fragmental method calculated by
FILTER-IT program, version 1.0.2, courtesy of SILICOS-IT, http://www.silicos-it.com

-2.54
Solubility 0.572 mg/ml ; 0.0029 mol/l
Class?

Solubility class: Log S scale
Insoluble < -10 < Poorly < -6 < Moderately < -4 < Soluble < -2 Very < 0 < Highly

Soluble

Pharmacokinetics

GI absorption?

Gatrointestinal absorption: according to the white of the BOILED-Egg

High
BBB permeant?

BBB permeation: according to the yolk of the BOILED-Egg

Yes
P-gp substrate?

P-glycoprotein substrate: SVM model built on 1033 molecules (training set)
and tested on 415 molecules (test set)
10-fold CV: ACC=0.72 / AUC=0.77
External: ACC=0.88 / AUC=0.94

No
CYP1A2 inhibitor?

Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set)
and tested on 3000 molecules (test set)
10-fold CV: ACC=0.83 / AUC=0.90
External: ACC=0.84 / AUC=0.91

No
CYP2C19 inhibitor?

Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set)
and tested on 3000 molecules (test set)
10-fold CV: ACC=0.80 / AUC=0.86
External: ACC=0.80 / AUC=0.87

No
CYP2C9 inhibitor?

Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set)
and tested on 2075 molecules (test set)
10-fold CV: ACC=0.78 / AUC=0.85
External: ACC=0.71 / AUC=0.81

No
CYP2D6 inhibitor?

Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set)
and tested on 1068 molecules (test set)
10-fold CV: ACC=0.79 / AUC=0.85
External: ACC=0.81 / AUC=0.87

No
CYP3A4 inhibitor?

Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set)
and tested on 2579 molecules (test set)
10-fold CV: ACC=0.77 / AUC=0.85
External: ACC=0.78 / AUC=0.86

No
Log Kp (skin permeation)?

Skin permeation: QSPR model implemented from
Potts RO and Guy RH. 1992 Pharm. Res.

-5.93 cm/s

Druglikeness

Lipinski?

Lipinski (Pfizer) filter: implemented from
Lipinski CA. et al. 2001 Adv. Drug Deliv. Rev.
MW ≤ 500
MLOGP ≤ 4.15
N or O ≤ 10
NH or OH ≤ 5

0.0
Ghose?

Ghose filter: implemented from
Ghose AK. et al. 1999 J. Comb. Chem.
160 ≤ MW ≤ 480
-0.4 ≤ WLOGP ≤ 5.6
40 ≤ MR ≤ 130
20 ≤ atoms ≤ 70

None
Veber?

Veber (GSK) filter: implemented from
Veber DF. et al. 2002 J. Med. Chem.
Rotatable bonds ≤ 10
TPSA ≤ 140

0.0
Egan?

Egan (Pharmacia) filter: implemented from
Egan WJ. et al. 2000 J. Med. Chem.
WLOGP ≤ 5.88
TPSA ≤ 131.6

0.0
Muegge?

Muegge (Bayer) filter: implemented from
Muegge I. et al. 2001 J. Med. Chem.
200 ≤ MW ≤ 600
-2 ≤ XLOGP ≤ 5
TPSA ≤ 150
Num. rings ≤ 7
Num. carbon > 4
Num. heteroatoms > 1
Num. rotatable bonds ≤ 15
H-bond acc. ≤ 10
H-bond don. ≤ 5

1.0
Bioavailability Score?

Abbott Bioavailability Score: Probability of F > 10% in rat
implemented from
Martin YC. 2005 J. Med. Chem.

0.55

Medicinal Chemistry

PAINS?

Pan Assay Interference Structures: implemented from
Baell JB. & Holloway GA. 2010 J. Med. Chem.

0.0 alert
Brenk?

Structural Alert: implemented from
Brenk R. et al. 2008 ChemMedChem

1.0 alert: heavy_metal
Leadlikeness?

Leadlikeness: implemented from
Teague SJ. 1999 Angew. Chem. Int. Ed.
250 ≤ MW ≤ 350
XLOGP ≤ 3.5
Num. rotatable bonds ≤ 7

No; 1 violation:MW<1.0
Synthetic accessibility?

Synthetic accessibility score: from 1 (very easy) to 10 (very difficult)
based on 1024 fragmental contributions (FP2) modulated by size and complexity penaties,
trained on 12'782'590 molecules and tested on 40 external molecules (r2 = 0.94)

2.48

Application In Synthesis of [ 151978-58-4 ]

* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.

  • Downstream synthetic route of [ 151978-58-4 ]

[ 151978-58-4 ] Synthesis Path-Downstream   1~35

  • 1
  • [ 151978-58-4 ]
  • [ 151978-69-7 ]
  • 3-[7-(6-tert-Butoxycarbonylamino-hex-1-ynyl)-1-(4-chloro-benzyl)-2,5-dioxo-1,2,3,5-tetrahydro-benzo[e][1,4]diazepin-4-yl]-propionic acid ethyl ester [ No CAS ]
  • 2
  • [ 151978-58-4 ]
  • [ 151978-57-3 ]
  • [ 151978-59-5 ]
YieldReaction ConditionsOperation in experiment
a) 1-(3-nitrobenzyl)-4-(2-carboxyethyl)-7-(N-boc-6-amino-1-hexynyl)-3,4-dihydro-1H-1,4-benzodiazepine-2,5-dione ethyl ester was prepared using the method described in part (f) of example 1. Thus, from 0.26 grams of 1-(3-nitrobenzyl)-4-(2-carboxyethyl)-7-iodo-3,4-dihydro-1H-1,4-benzodiazepine-2,5-dione ethyl ester and 0.19 grams of N-boc-6-amino-1-hexyne was prepared 226.3 mgs (78percent) 1-(3-nitrobenzyl)-4-(2-carboxyethyl)-7-(N-boc-6-amino-1-hexynyl)-3,4-dihydro-1H-1,4-benzodiazepine-2,5-dione ethyl ester (TLC, SiO2, 1:1 ethyl acetate/hexane, Rf =0.34, upsilonnu positive). 1 H NMR (CDCl3, deltaTMS) 8.09 [1H, dt, 3 JHH =7 Hz, 4 JHH =2 Hz, NCH2 (C4-Ar-H)], 8.02 [1H, bs, NCH2 (C2-Ar-H)], 7.83 (1H, d, 4 JHH =2 Hz, o-CON), 7.50-7.35 [ 3H, m, NCH2 (C5, C6-Ar-H), Ar-H p-CON], 7.05 (1H, d, 3 JHH =8 Hz, Ar-H m-CON), 5.22 (1H, d, 2 JHH =16 Hz, NCHHAr), 5.02 (1H, d, 2 JHH =16 Hz, NCHHAr), 4.60 (1H, bs, BocNH), 4.20-4.08 (3H, m, NCHHCO, OCH2), 4.0-3.8 (3H, m, NCH2 CH2, NCHHCO), 3.16 (2H, q, 3 JHH =6 Hz, BocNHCH2), 2.72 (1H, dt, 2 JHH =16 Hz, 3 JHH =8 Hz, CHHCO2), 2.62 (1H, dt, 2 JHH =16 Hz, 3 JHH =8 Hz, CHHCO2), 2.39 (2H, t, 3 JHH =6 Hz, C.integral.CCH2), 1.60 (4H, bs, CH2 CH2 CH2 CH 2), 1.41 (9H, s, t-Bu), 1.24 (3H, t, 3 JHH =7 Hz, CH3).
YieldReaction ConditionsOperation in experiment
0.124 grams (84%) e) 1-(methyl)-4-(2-carboxyethyl)-7-(N-boc-6-amino-1-hexynyl)-3,4-dihydro-1H-1,4-benzodiazepine-2,5-dione ethyl ester was prepared using the method described in part (f) of example 1. Thus, 0.126 grams of 1-methyl-4-(2-carboxyethyl)-7-iodo-3,4-dihydro-1H-1,4-benzodiazepine-2,5-dione ethyl ester and 0.119 grams of N-boc-6-amino-1-hexyne yielded 0.124 grams (84percent) 1-(methyl)-4-(2-carboxyethyl)-7-(N-boc-6-amino-1-hexynyl)-3,4-dihydro-1H-1,4-benzodiazepine-2,5-dione ethyl ester (TLC, SiO2, 1:1 ethyl acetate/hexane, Rf =0.36, upsilonnu positive). 1 H NMR (CDCl3, deltaTMS) 7.84 (1H, d, 4 JHH =2 Hz, Ar-H o-CON), 7.47 (1H, dd, 4 JHH =2 Hz, 3 JHH =9 Hz, Ar-H p-CON), 7.07 (1H, d, 3 JHH =9 Hz, Ar-H m-CON), 4.60 (1H, bs, NH), 4.12 (2H, q, 3 JHH =7 Hz, OCH2), 4.0 (1H, d, 2 JHH =15 Hz, NCHHCO), 3.90 (2H, t, 3 JHH =7 Hz, NCH2), 3.84 (1H, d, 2 JHH =15 Hz, NCHHCO), 3.26 (3H, s, NCH3), 3.15 (2H, q, 3 JHH =7 Hz, BocNHCH2), 2.73 (1H, dt, 2 JHH =16 Hz, 3 JHH =9 Hz, CHHCO2), 2.63 (1H, dt, 2 JHH =16 Hz, 3 JHH =9 Hz, CHHCO2),2.40 (2H, t, 3 JHH =6 Hz, C.integral.CCH2), 1.62 (4H, m, CH2 CH2 CH2 CH2), 1.24 (3H, t, 3 JHH =7 Hz, CH3).
  • 5
  • [ 944357-88-4 ]
  • [ 151978-58-4 ]
  • [ 958842-91-6 ]
  • 6
  • [ 1005837-05-7 ]
  • [ 151978-58-4 ]
  • [ 1005837-11-5 ]
  • 7
  • [ 1005837-03-5 ]
  • [ 151978-58-4 ]
  • [ 1005837-09-1 ]
  • 8
  • [ 1225055-49-1 ]
  • [ 151978-58-4 ]
  • [ 1225055-51-5 ]
  • 9
  • [ 15252-45-6 ]
  • [ 24424-99-5 ]
  • [ 151978-58-4 ]
YieldReaction ConditionsOperation in experiment
1.831 g With sodium hydrogencarbonate; In tetrahydrofuran; water; at 0 - 20℃; for 2h;Inert atmosphere; N-(5-hexynyl)phthalimide (4.66 g, 20.5 mmol) was dissolved in THF (250 ml) and hydrazine hydrate (410 mmol, 19.8 ml) was added. The obtained solution was refluxed for 3 h, forming a white precipitate after 1h. After the reaction was finished it was cooled down to 8°C and filtered. The filtrate was evaporated to obtain the crude amine 8 as yellow liquid. The crude amine was dissolved in THF (14 ml) and water (14 ml) was added followed by NaHCO3 (2.27 g, 27.0 mmol). The solution was cooled to 0°C and Boc2O (2 M in THF, 8.09 ml; 16.2 mmol) was added via a syringe. The temperature was maintained for 15 min before removing the ice-bath. After 2h at rt the reaction was diluted with EtOAc. It was washed with water, sat. NaHCO3 aq and brine. Drying and evaporation gave a crude oil that was purified on silica with CyHex/EtOAc (92/8) resulting in 1.831g (45percent) 9 as pale yellow oil.
  • 10
  • [ 28075-50-5 ]
  • [ 151978-58-4 ]
  • [ 1246242-16-9 ]
  • 11
  • [ 151978-58-4 ]
  • [ 75-05-8 ]
  • [ 1308379-20-5 ]
  • 12
  • [ 151978-58-4 ]
  • [ 1014024-69-1 ]
  • 13
  • [ 151978-58-4 ]
  • C2F3O2(1-)*C19H26NO5(1+) [ No CAS ]
  • 14
  • [ 151978-58-4 ]
  • [ 1361317-53-4 ]
  • 15
  • [ 151978-58-4 ]
  • [ 1177680-32-8 ]
  • 16
  • [ 151978-58-4 ]
  • C19H24BrNO6 [ No CAS ]
  • 17
  • [ 151978-58-4 ]
  • [ 685895-45-8 ]
  • [ 1361317-39-6 ]
  • 18
  • [ 16114-53-7 ]
  • [ 151978-58-4 ]
  • C21H26N2O3 [ No CAS ]
  • 19
  • [ 1263282-26-3 ]
  • 4-(3-(trifluoromethyl)-3H-diazirin-3-yl)benzaldehyde [ No CAS ]
  • [ 151978-58-4 ]
  • C37H42F6N2O4 [ No CAS ]
YieldReaction ConditionsOperation in experiment
With copper(I) bromide; In toluene; at 60℃; for 48h;Inert atmosphere; Glovebox; Molecular sieve; General procedure: #10;Method A (non-diazirine modulators): Inside a glovebox under N2-atmosphere, a pressure tight vial was charged with aldehyde (1 eq.), amine (2 eq.) and the respective terminal alkyne (2 eq.). CuBr (3 eq.) was added, followed by activated 4A molecular sieves (~1 g per 10 ml solvent). Toluene (7 ml/mmol aldehyde) was added and the reaction mixture heated to 90° C under vigorous stirring for 24 h. The crude reaction mixture was filtered twice through celite and a silica pad eluting with EtOAc (for biotin containing compounds 5percent MeOH in DCM was used). After evaporation of the organic solvents, the crude extracts were purified by silica-gel chromatography or preparative HPLC as described below and in the supporting information. Method B (diazirine modulators): An equivalent setup as described above was used reducing the reaction temperature to 60 °C and prolonging the reaction time to 48 h.
  • 20
  • [ 151978-58-4 ]
  • methyl 2-(1-(7-(5-((3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl)pentanamido)-1-(4-(3-(trifluoromethyl)-3H-diazirin-3-yl)phenyl)hept-2-yn-1-yl)-2-(4-(trifluoromethyl)phenyl)piperidin-4-yl)acetate [ No CAS ]
  • 21
  • [ 151978-58-4 ]
  • 2-(1-(7-(5-((3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl)pentanamido)-1-(4-(3-(trifluoromethyl)-3H-diazirin-3-yl)phenyl)hept-2-yn-1-yl)-2-(4-(trifluoromethyl)phenyl)piperidin-4-yl)acetic acid [ No CAS ]
  • 22
  • [ 151978-58-4 ]
  • C32H34F6N2O2 [ No CAS ]
  • 23
  • [ 6097-08-1 ]
  • [ 151978-58-4 ]
  • 24
  • [ 151978-58-4 ]
  • [ 947241-28-3 ]
  • 25
  • [ 51779-32-9 ]
  • [ 151978-58-4 ]
  • 26
  • [ 928-90-5 ]
  • [ 151978-58-4 ]
  • 27
  • [ 75-07-0 ]
  • [ 151978-58-4 ]
  • tert-butyl (7-hydroxyoct-5-yn-1-yl)carbamate [ No CAS ]
  • 28
  • [ 1101108-51-3 ]
  • [ 151978-58-4 ]
  • 29
  • [ 151978-58-4 ]
  • tert-butyl 5,5,6,6-tetracyano-7-methyl-3,4,4a,5,6,7-hexahydroquinoline-1(2H)-carboxylate [ No CAS ]
  • tert-butyl 5,5,6,6-tetracyano-7-methyl-3,4,4a,5,6,7-hexahydroquinoline-1(2H)-carboxylate [ No CAS ]
  • 30
  • C46H46BF2N11O4 [ No CAS ]
  • [ 151978-58-4 ]
  • C68H84BF2N13O8 [ No CAS ]
  • 31
  • C40H37BF2N8O3 [ No CAS ]
  • [ 151978-58-4 ]
  • C51H56BF2N9O5 [ No CAS ]
  • 32
  • 4-bromo-2-(2,6-dioxopiperidin-3-yl)isoindoline-1,3-dione [ No CAS ]
  • [ 151978-58-4 ]
  • tert-butyl (6-(2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindol-4-yl)hex-5-yn-1-yl)carbamate [ No CAS ]
YieldReaction ConditionsOperation in experiment
56% With bis-triphenylphosphine-palladium(II) chloride; copper(l) iodide; triethylamine; at 70℃; for 3h;Inert atmosphere; Compound (4a) (0.7 g, 2.0 mmol),Tert-butyl-5-yn-1-ylcarbamate (0.8 g, 4.0 mmol),CuI(76 mg, 0.4 mmol), Pd(PPh3)2Cl2 (140 mg, 0.2 mmol).5.0 mL of triethylamine was added under nitrogen. Reaction at 70 C for 3 h,Cooling and filtration, adding 100 mL of water, extracting 100 mL×3 of ethyl acetate, and combining the organic phases to dryness, siliconColumn chromatography (ethyl acetate) gave compound (4b) 0.5 g, yield 56%
  • 33
  • 3-(4-bromo-1-oxo-2,3-dihydro-1H-isoindol-2-yl)piperidine-2,6-dione [ No CAS ]
  • [ 151978-58-4 ]
  • C24H29N3O5 [ No CAS ]
  • 34
  • [ 30964-00-2 ]
  • [ 75-65-0 ]
  • [ 151978-58-4 ]
  • 35
  • [ 151978-58-4 ]
  • tert-butyl (E)-(6-phenylhex-5-en-1-yl)carbamate [ No CAS ]
 

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