Structure of 15197-75-8
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The BI-3802 was designed by Boehringer Ingelheim and could be obtained free of charge through the Boehringer Ingelheim open innovation portal opnMe.com, associated with its negative control.
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CAS No. : | 15197-75-8 |
Formula : | C8H9NO2 |
M.W : | 151.16 |
SMILES Code : | OC(=O)CCC1=NC=CC=C1 |
MDL No. : | MFCD00995159 |
InChI Key : | AZYKGQOIAGPVCK-UHFFFAOYSA-N |
Pubchem ID : | 564292 |
GHS Pictogram: |
![]() |
Signal Word: | Warning |
Hazard Statements: | H302-H315-H319-H335 |
Precautionary Statements: | P261-P305+P351+P338 |
Num. heavy atoms | 11 |
Num. arom. heavy atoms | 6 |
Fraction Csp3 | 0.25 |
Num. rotatable bonds | 3 |
Num. H-bond acceptors | 3.0 |
Num. H-bond donors | 1.0 |
Molar Refractivity | 40.59 |
TPSA ? Topological Polar Surface Area: Calculated from |
50.19 Ų |
Log Po/w (iLOGP)? iLOGP: in-house physics-based method implemented from |
1.02 |
Log Po/w (XLOGP3)? XLOGP3: Atomistic and knowledge-based method calculated by |
0.38 |
Log Po/w (WLOGP)? WLOGP: Atomistic method implemented from |
1.1 |
Log Po/w (MLOGP)? MLOGP: Topological method implemented from |
0.39 |
Log Po/w (SILICOS-IT)? SILICOS-IT: Hybrid fragmental/topological method calculated by |
1.36 |
Consensus Log Po/w? Consensus Log Po/w: Average of all five predictions |
0.85 |
Log S (ESOL):? ESOL: Topological method implemented from |
-1.22 |
Solubility | 9.06 mg/ml ; 0.0599 mol/l |
Class? Solubility class: Log S scale |
Very soluble |
Log S (Ali)? Ali: Topological method implemented from |
-1.0 |
Solubility | 15.1 mg/ml ; 0.1 mol/l |
Class? Solubility class: Log S scale |
Very soluble |
Log S (SILICOS-IT)? SILICOS-IT: Fragmental method calculated by |
-2.19 |
Solubility | 0.976 mg/ml ; 0.00646 mol/l |
Class? Solubility class: Log S scale |
Soluble |
GI absorption? Gatrointestinal absorption: according to the white of the BOILED-Egg |
High |
BBB permeant? BBB permeation: according to the yolk of the BOILED-Egg |
Yes |
P-gp substrate? P-glycoprotein substrate: SVM model built on 1033 molecules (training set) |
No |
CYP1A2 inhibitor? Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set) |
No |
CYP2C19 inhibitor? Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set) |
No |
CYP2C9 inhibitor? Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set) |
No |
CYP2D6 inhibitor? Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set) |
No |
CYP3A4 inhibitor? Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set) |
No |
Log Kp (skin permeation)? Skin permeation: QSPR model implemented from |
-6.95 cm/s |
Lipinski? Lipinski (Pfizer) filter: implemented from |
0.0 |
Ghose? Ghose filter: implemented from |
None |
Veber? Veber (GSK) filter: implemented from |
0.0 |
Egan? Egan (Pharmacia) filter: implemented from |
0.0 |
Muegge? Muegge (Bayer) filter: implemented from |
1.0 |
Bioavailability Score? Abbott Bioavailability Score: Probability of F > 10% in rat |
0.56 |
PAINS? Pan Assay Interference Structures: implemented from |
0.0 alert |
Brenk? Structural Alert: implemented from |
0.0 alert: heavy_metal |
Leadlikeness? Leadlikeness: implemented from |
No; 1 violation:MW<1.0 |
Synthetic accessibility? Synthetic accessibility score: from 1 (very easy) to 10 (very difficult) |
1.34 |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
78% | With potassium permanganate;pyrographite; In ethanol; water; | 3-(2-Pyridyl)-propionic Acid In a 50 mL round-bottomed flask equipped with a stirring bar was placed 3-(2-pyridyl)-propanol (1 g, 7.6 mmol), water (13 mL) and concentrated sulfuric acid (0.5 9, 5.1 mmol). To this stirred solution was added over a period of 30 min potassium permanganate (1.8 g, 11.3 mmol) while the reaction temperature was maintained at 50 C. After the addition was completed, the mixture was held at 50 C. until the color of the reaction mixture turned brown, then heated at 80 C. for 1 hour and filtered. The filtrate was evaporated to dryness to yield quantitatively the desired acid (1.14 g) suitable for next step without further purification. To prepare a pure acid, the residue thus obtained was boiled in ethanol (10 mL) in the presence of charcoal (0.1 g) for 5 min, filtered and cooled to give crystalline 3- (2-pyridyl)-propionic acid (0.88 g, 78%). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
(e) 3-(2-pyridyl)-propionic acid: 1-hydroxy-3-2-pyridyl)-propane-1,1-diphosphonic acid in a yield of 54% of theory. The product is obtained as the monosodium salt with 2 moles water of crystallisation. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With 4-methyl-morpholine; benzotriazol-1-ol; 1-ethyl-(3-(3-dimethylamino)propyl)-carbodiimide hydrochloride; In dichloromethane; at 20℃; for 18h; | Example 10 5-Fluoro-2-(3-methylsulfanyl-phenoxy)-N-[1-(3-pyridin-2-yl-propionyl)-piperidin-4-yl]-nicotinamide 1-(3-Dimethylaminopropyl)-3-ethylcarbodiimide hydrochloride (91 mg, 0.479 mmol), 1-hydroxybenzotriazole (47 mg, 0.351 mmol) and <strong>[15197-75-8]3-pyridinepropionic acid</strong> (72 mg, 0.479 mmol) were added to a solution of 5-fluoro-2-(3-methylsulfanyl-phenoxy)-N-piperidin-4-yl-nicotinamide (115 mg, 0.319 mmol) in dichloromethane (5 ml) under nitrogen under room temperature and N-methylmorpholine (70 mul, 0.638 mmol) was added. The reaction was stirred at room temperature for 18 h. The reaction mixture was quenched with sat. ammonium chloride (1 ml) and diluted with dichloromethane (5 ml) and water (1 ml). The organic phase was collected via a hydrophobic separation cartridge, concentrated under reduced pressure and the residue was purified by flash column chromatography on silica gel eluding with a solvent gradient of dichloromethane:methanol:concentrated aqueous ammonia (99:1:0.1 changing to 95:5:0.5, by volume) to give 5-fluoro-2-(3-methylsulfanyl-phenoxy)-N-[1-(3-pyridin-2-yl-propionyl)-piperidin-4-yl]-nicotinamide (167 mg) as a yellow gum. 1H NMR (400 MHz, CD3OD): delta=8.42 (1H, s), 8.27-8.30 (1H, d), 8.08-8.10 (1H, d), 7.97-8.00 (1H, m), 7.72-7.76 (1H, d), 7.29-7.34 (2H, m), 7.08-7.13 (1H, d), 7.05 (1H, s), 6.86-6.90 (1H, m), 4.30-4.38 (1H, d), 4.05-4.15 (1H, m), 3.82-3.90 (1H, d), 3.16-3.24 (1H, t), 2.84-2.96 (3H, t+m), 2.70-2.78 (2H, m), 2.45 (3H, s), 1.91-1.99 (2H, d), 1.30-1.43 (2H, m) ppm. LRMS (electrospray): m/z [M+Na]+ 517, [M-H]+ 493. Anal. Found C, 61.95; H, 5.52; N, 10.91. C26H27FN4O3S. 0.5 mol H2O requires C, 62.01; H, 5.60; N, 11.13%. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
20% | With sodium bicarbonate; In water; N,N-dimethyl-formamide; | Preparation 129 N-(3-{6-Methyl-3-[3-(2-pyridinyl)propanoyl]-3-azabicyclo[3.1.0]hex-6-yl}phenyl)methanesulfonamide To a solution of 3-(2-pyridinyl)propanoic acid (prepared according to the method described in WO 9730045 A1, 32 mg, 0.212 mmol) in N,N-dimethylformamide (2 ml) was added 1-hydroxybenzotriazole monohydrate (32 mg, 0.209 mmol) and 1-(3-dimethylarninopropyl)-3-ethylcarbodniimde hydrochloride (41 mg, 0.214 mmol). After stirring at room temperature for 10 min, the mixture was treated with the hydrochloride salt of N-[3-(6-methyl-3-azabicyclo[3.1.0]hex-6-yl)phenyl]methanesulfonamide (Preparation 53, 64 mg, 0.212 mmol) and sodium hydrogen carbonate (36 mg, 0.424 mmol). The reaction mixture was stirred at room temperature for 5 d. Water (5 ml) was added and the reaction mixture was extracted with dichloromethane (3*5 ml). The combined organic extracts were dried (MgSO4), and concentrated in vacuo to afford 70 mg of a brown oil. This was purified by chromatography using a Biotage Flash 12 cartridge packed with silica gel (8 g) eluding with dichloromethane:ethanol:0.880 ammonia (400:8:1 then 300:8:1) to afford the title compound as a colourless oil (17 mg, 20%). NMR (CDCl3, selected data): 1.18 (s, 3H), 1.95 (m, 2H), 2.75 (m, 2H), 3.00 (s, 3H), 3.20 (dd, 2H), 3.60 (m, 1H), 3.70 (m, 2H), 3.80 (dd, 1H), 7.00-7.18 (m, 4H), 7.20-7.30 (m, 2H), 7.45 (br. s, 1H), 7.58 (m, 1H), 8.50 (d, 1H). MS (electrospray) M/Z (M+H+) 400.2; C21H25N3O3S+H requires 400.2. M/Z (MNa+) 422.2; C21H25N3O3S+Na requires 422.2. IR?max (polyethylene card)/cm-1: 2360 (s), 2341 (m), 1624 (m), 1437 (w), 1238 (w), 1154 (w). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
In toluene; | Example 6 8-chlorodibenz[b,f][1,4]oxazepine-10(11H)-carboxylic acid, 2-[1-oxo-3-(2-pyridinyl)propyl]hydrazide (6) STR17 To a stirring 5 mL toluene solution of 0.22 g (1.3 mmol) of 3-(2-pyridyl)propanoic acid, hydrazide (5), prepared as described above in Example 5, and 0.18 mL (1.3 mmol) of triethylamine (TEA) was added dropwise a 5 mL toluene solution of 8-chlorodibenz[b,f][1,4]oxazepine-10(11H)-carbonyl chloride (2), prepared as described above in Example 2. The reaction was heated at reflux for 1 hour, and then the solvent was removed under vacuum. The residue was purified by column chromatography in the manner described by Still et al., J. Org. Chem., 43, 2923 (1978) to yield 0.25 g (57%) of product. The identity of this material, and of the materials synthesised in the subsequent examples, was confirmed by 1 H NMR, 13 C NMR, microanalysis, and HPLC. The yield of product was 0.34 g (61%). The product was dissolved in methanol (MeOH) and filtered through activated charcoal. The solvent was removed under vacuum to obtain product. Analysis calculated for C22 H19 N4 O3 Cl.H2 O (M.W. 427.37): C, 61.83; H, 4.56; N, 13.11. Found: C, 61.71; H, 4.44; N, 12.89. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With hydrazine hydrate; In ethanol; | Example 5 3-(2-pyridyl)propanoic acid, hydrazide (5) STR16 To a stirring 5 mL EtOH solution of 0.58 g (3.2 mmol) of ethyl 3-(2-pyridinyl)propanoate (4), prepared as described above in Example 4, was added 0.32 g (6.5 mmol) of hydrazine hydrate. The reaction was heated at reflux for three weeks. Although the reaction was still incomplete, the solvent was removed under vacuum. The resulting gum was triturated with diethyl ether (Et2 O). The product remained a gum. The yield of 3-(2-pyridyl)propanoic acid, hydrazide (5) was 0.22 g (42%). This product was used immediately in the manner described in Example 6 below. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
A solution of 2-(7-methyl-4-(piperazin-l-yl)quinazolin-2-yl)phenol (30 mg, 0.09mmol) in DMF (0.5 mL) was added to <strong>[15197-75-8]3-(pyridin-2-yl)propanoic acid</strong> (21.23 mg, 0.14 mmol).Triethylamine (25 xL) was added, followed by a solution of HATU (45 mg) in 0.5 mL DMF atroom temperature. The reaction was stirred overnight. Purification using reverse phase HPLC(10-99% CH3CN (0.035% TFA)/H20 (0.05% TFA)) gave l-(4-(2-(2-hydroxyphenyl)-7-methylquinazolin-4-yl)piperazin-l-yl)-3-(pyridin-2-yl)propan-l-one as the TFA salt. LC/MS:m/z 454.3 (M+H)+ at 1.94 min (10%-99% CH3CN (0.035% TFA)/H20 (0.05% TFA)). |
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