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Structure of 140645-23-4

Chemical Structure| 140645-23-4

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Product Details of [ 140645-23-4 ]

CAS No. :140645-23-4
Formula : C11H22N2O2
M.W : 214.30
SMILES Code : NC[C@@H]1CN(C(OC(C)(C)C)=O)CCC1
MDL No. :MFCD03839876
InChI Key :WPWXYQIMXTUMJB-SECBINFHSA-N
Pubchem ID :1502023

Safety of [ 140645-23-4 ]

GHS Pictogram:
Signal Word:Warning
Hazard Statements:H302
Precautionary Statements:P280-P305+P351+P338

Computational Chemistry of [ 140645-23-4 ] Show Less

Physicochemical Properties

Num. heavy atoms 15
Num. arom. heavy atoms 0
Fraction Csp3 0.91
Num. rotatable bonds 4
Num. H-bond acceptors 3.0
Num. H-bond donors 1.0
Molar Refractivity 64.11
TPSA ?

Topological Polar Surface Area: Calculated from
Ertl P. et al. 2000 J. Med. Chem.

55.56 Ų

Lipophilicity

Log Po/w (iLOGP)?

iLOGP: in-house physics-based method implemented from
Daina A et al. 2014 J. Chem. Inf. Model.

2.71
Log Po/w (XLOGP3)?

XLOGP3: Atomistic and knowledge-based method calculated by
XLOGP program, version 3.2.2, courtesy of CCBG, Shanghai Institute of Organic Chemistry

0.92
Log Po/w (WLOGP)?

WLOGP: Atomistic method implemented from
Wildman SA and Crippen GM. 1999 J. Chem. Inf. Model.

1.21
Log Po/w (MLOGP)?

MLOGP: Topological method implemented from
Moriguchi I. et al. 1992 Chem. Pharm. Bull.
Moriguchi I. et al. 1994 Chem. Pharm. Bull.
Lipinski PA. et al. 2001 Adv. Drug. Deliv. Rev.

1.15
Log Po/w (SILICOS-IT)?

SILICOS-IT: Hybrid fragmental/topological method calculated by
FILTER-IT program, version 1.0.2, courtesy of SILICOS-IT, http://www.silicos-it.com

0.69
Consensus Log Po/w?

Consensus Log Po/w: Average of all five predictions

1.34

Water Solubility

Log S (ESOL):?

ESOL: Topological method implemented from
Delaney JS. 2004 J. Chem. Inf. Model.

-1.48
Solubility 7.03 mg/ml ; 0.0328 mol/l
Class?

Solubility class: Log S scale
Insoluble < -10 < Poorly < -6 < Moderately < -4 < Soluble < -2 Very < 0 < Highly

Very soluble
Log S (Ali)?

Ali: Topological method implemented from
Ali J. et al. 2012 J. Chem. Inf. Model.

-1.67
Solubility 4.55 mg/ml ; 0.0212 mol/l
Class?

Solubility class: Log S scale
Insoluble < -10 < Poorly < -6 < Moderately < -4 < Soluble < -2 Very < 0 < Highly

Very soluble
Log S (SILICOS-IT)?

SILICOS-IT: Fragmental method calculated by
FILTER-IT program, version 1.0.2, courtesy of SILICOS-IT, http://www.silicos-it.com

-1.33
Solubility 10.1 mg/ml ; 0.0471 mol/l
Class?

Solubility class: Log S scale
Insoluble < -10 < Poorly < -6 < Moderately < -4 < Soluble < -2 Very < 0 < Highly

Soluble

Pharmacokinetics

GI absorption?

Gatrointestinal absorption: according to the white of the BOILED-Egg

High
BBB permeant?

BBB permeation: according to the yolk of the BOILED-Egg

Yes
P-gp substrate?

P-glycoprotein substrate: SVM model built on 1033 molecules (training set)
and tested on 415 molecules (test set)
10-fold CV: ACC=0.72 / AUC=0.77
External: ACC=0.88 / AUC=0.94

No
CYP1A2 inhibitor?

Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set)
and tested on 3000 molecules (test set)
10-fold CV: ACC=0.83 / AUC=0.90
External: ACC=0.84 / AUC=0.91

No
CYP2C19 inhibitor?

Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set)
and tested on 3000 molecules (test set)
10-fold CV: ACC=0.80 / AUC=0.86
External: ACC=0.80 / AUC=0.87

No
CYP2C9 inhibitor?

Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set)
and tested on 2075 molecules (test set)
10-fold CV: ACC=0.78 / AUC=0.85
External: ACC=0.71 / AUC=0.81

No
CYP2D6 inhibitor?

Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set)
and tested on 1068 molecules (test set)
10-fold CV: ACC=0.79 / AUC=0.85
External: ACC=0.81 / AUC=0.87

No
CYP3A4 inhibitor?

Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set)
and tested on 2579 molecules (test set)
10-fold CV: ACC=0.77 / AUC=0.85
External: ACC=0.78 / AUC=0.86

No
Log Kp (skin permeation)?

Skin permeation: QSPR model implemented from
Potts RO and Guy RH. 1992 Pharm. Res.

-6.95 cm/s

Druglikeness

Lipinski?

Lipinski (Pfizer) filter: implemented from
Lipinski CA. et al. 2001 Adv. Drug Deliv. Rev.
MW ≤ 500
MLOGP ≤ 4.15
N or O ≤ 10
NH or OH ≤ 5

0.0
Ghose?

Ghose filter: implemented from
Ghose AK. et al. 1999 J. Comb. Chem.
160 ≤ MW ≤ 480
-0.4 ≤ WLOGP ≤ 5.6
40 ≤ MR ≤ 130
20 ≤ atoms ≤ 70

None
Veber?

Veber (GSK) filter: implemented from
Veber DF. et al. 2002 J. Med. Chem.
Rotatable bonds ≤ 10
TPSA ≤ 140

0.0
Egan?

Egan (Pharmacia) filter: implemented from
Egan WJ. et al. 2000 J. Med. Chem.
WLOGP ≤ 5.88
TPSA ≤ 131.6

0.0
Muegge?

Muegge (Bayer) filter: implemented from
Muegge I. et al. 2001 J. Med. Chem.
200 ≤ MW ≤ 600
-2 ≤ XLOGP ≤ 5
TPSA ≤ 150
Num. rings ≤ 7
Num. carbon > 4
Num. heteroatoms > 1
Num. rotatable bonds ≤ 15
H-bond acc. ≤ 10
H-bond don. ≤ 5

0.0
Bioavailability Score?

Abbott Bioavailability Score: Probability of F > 10% in rat
implemented from
Martin YC. 2005 J. Med. Chem.

0.55

Medicinal Chemistry

PAINS?

Pan Assay Interference Structures: implemented from
Baell JB. & Holloway GA. 2010 J. Med. Chem.

0.0 alert
Brenk?

Structural Alert: implemented from
Brenk R. et al. 2008 ChemMedChem

0.0 alert: heavy_metal
Leadlikeness?

Leadlikeness: implemented from
Teague SJ. 1999 Angew. Chem. Int. Ed.
250 ≤ MW ≤ 350
XLOGP ≤ 3.5
Num. rotatable bonds ≤ 7

No; 1 violation:MW<1.0
Synthetic accessibility?

Synthetic accessibility score: from 1 (very easy) to 10 (very difficult)
based on 1024 fragmental contributions (FP2) modulated by size and complexity penaties,
trained on 12'782'590 molecules and tested on 40 external molecules (r2 = 0.94)

2.7

Application In Synthesis of [ 140645-23-4 ]

* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.

  • Downstream synthetic route of [ 140645-23-4 ]

[ 140645-23-4 ] Synthesis Path-Downstream   1~35

  • 1
  • [ 501-53-1 ]
  • [ 140645-23-4 ]
  • [ 879275-35-1 ]
YieldReaction ConditionsOperation in experiment
74% With triethylamine; In dichloromethane; at 0 - 20℃; for 16h; (R)-tert-Butyl 3-(aminomethyl)piperidine-l-carboxylate (1.00 g, 4.67 mmol) wasdissolved in 14 mL anhydrous CH2CI2 under an N2 atmosphere and cooled to 0 C. Triethylamine (1.30 mL, 945 mg, 9.34 mmol) was added followed by the dropwise addition of benzyl chloroformate (0.99 mL, 1.20 g, 7.00 mmol). After 16 h, the reaction was complete. The mixture was partitioned between H2O and CH2CI2, and separated, and the aqueous layer was extracted twice with CH2CI2. The organic layers were combined, dried over Na2S04, filtered, and concentrated to a light yellow oil. Purification via silica gel chromatography using 97% CH2Cl2/3% MeOH gave, benzyl ((i?)-l-(tert-butoxycarbonyl)piperidin-3-yl)methylcarbamate as a clear colorless oil (1.2 g, 74%). LC/MS: m/z 349.5 (M+H)+ at 3.21 min (10%-99% CH3CN (0.035% TFA)/H20 (0.05% TFA)).
  • 2
  • [ 140645-22-3 ]
  • [ 140645-23-4 ]
YieldReaction ConditionsOperation in experiment
With 5%-palladium/activated carbon; hydrogen; In methanol; at 20℃; for 9h; (R)-tert-butyl3-(aminomethyl)piperidine-1 -carboxylate._(S)-tert-butyl 3-(azidomethyl)piperidine- 1 -carboxylate (5.38 g, 22.40 mmol) was dissolved in MeOH (50 ml), and then Pd/C (5% mol) was added, followed by stirring at room temperature under H2 (gas) for 9 hours. After the completion of the reaction, the reaction mixture was filtered through celite, followed by filtration and concentration under reduced pressure, and then the next reaction was advanced without purification.10238] ?H-NMR (300 MHz, CDC13) oe 4.02-3.73 (m, 2H),2.94-2.73 (m, 1H), 2.72-2.33 (m, 3H), 1.90-1.02 (m, 5H),1.44 (s, 9H)
With palladium on activated charcoal; hydrogen; In methanol; at 20℃; for 9h; [0368] (S) -tert-butyl 3- (azidomethyl) piperidine-1-carboxylate (5.38 g, 22.40 mmol) was dissolved in MeOH (50 ml) Pd / C (5% mol) And the mixture was stirred under H2 (gas) at room temperature for 9 hours. After completion of the reaction, after the Celite filter, Filtered, concentrated under reduced pressure, and the following reaction was carried out without purification
With hydrogenchloride; sodium hydroxide; triphenylphosphine; In hydrous tetrahydrofuran; (Step 6) Synthesis of (3R)-3-aminomethyl-1-(tert-butoxycarbonyl)-piperidine To a solution of 600 mg of (3S)-3-azidomethyl-1-(tert-butoxycarbonyl)piperidine in 12.5 ml of 20% hydrous tetrahydrofuran, 622 mg of triphenylphosphine was added at room temperature, followed by 45 minutes' refluxing under heating. The reaction liquid was rendered acidic by addition of 0.5 N hydrochloric acid, and successively washed with chloroform and ethyl acetate. Then 4N aqueous sodium hydroxide solution was added to the aqueous layer to render the latter basic, followed by extraction with chloroform and drying over anhydrous sodium sulfate. Distilling the solvent off under reduced pressure, 497 mg of the title compound was obtained.
  • 3
  • [ 140645-23-4 ]
  • [ 1027081-19-1 ]
  • 3-[6-(3,3,3-triphenyl-propionylamino)-hexanoylamino]-methyl}-piperidine-1-carboxylic acid <i>tert</i>-butyl ester [ No CAS ]
  • 4
  • [ 140645-23-4 ]
  • [ 323183-39-7 ]
  • [ 323183-40-0 ]
  • 5
  • [ 140645-23-4 ]
  • [ 1026164-31-7 ]
  • 3-({4-[2-(3,3,3-triphenyl-propionylamino)-acetylamino]-butyrylamino}-methyl)-piperidine-1-carboxylic acid <i>tert</i>-butyl ester [ No CAS ]
  • 6
  • [ 140645-23-4 ]
  • [ 1026540-52-2 ]
  • 3-({3-[3-(3,3,3-triphenyl-propionylamino)-propionylamino]-propionylamino}-methyl)-piperidine-1-carboxylic acid <i>tert</i>-butyl ester [ No CAS ]
  • 7
  • [ 140645-23-4 ]
  • [(S)-1-(3,3,3-Triphenyl-propionyl)-pyrrolidine-2-carbonyl]-amino}-acetic acid [ No CAS ]
  • [ 1028280-87-6 ]
  • 8
  • [ 140645-23-4 ]
  • [ 1027035-65-9 ]
  • [ 1026269-96-4 ]
  • 9
  • [ 140645-23-4 ]
  • [ 1027186-35-1 ]
  • [ 1026352-31-7 ]
  • 10
  • [ 140645-23-4 ]
  • [ 323183-73-9 ]
  • (R)-3-[({(R)-1-[(S)-1-(3,3,3-Triphenyl-propionyl)-pyrrolidine-2-carbonyl]-pyrrolidine-2-carbonyl}-amino)-methyl]-piperidine-1-carboxylic acid tert-butyl ester [ No CAS ]
  • 12
  • [ 140645-23-4 ]
  • [ 382637-78-7 ]
  • [ 847831-93-0 ]
  • 13
  • [ 140645-23-4 ]
  • [ 675122-49-3 ]
  • [ 847831-95-2 ]
  • 14
  • [ 364356-34-3 ]
  • [ 140645-23-4 ]
  • 3-([2-(methyl-phenyl-amino)-thiazole-4-carbonyl]-amino}-methyl)-piperidine-1-carboxylic acid <i>tert</i>-butyl ester [ No CAS ]
  • 15
  • [ 140645-23-4 ]
  • [ 175203-34-6 ]
  • 3-([2-(2,3-dihydro-benzo[1,4]dioxin-2-yl)-thiazole-4-carbonyl]-amino}-methyl)-piperidine-1-carboxylic acid <i>tert</i>-butyl ester [ No CAS ]
  • 16
  • [ 404835-95-6 ]
  • [ 140645-23-4 ]
  • tert-butyl (S)-3-[6-bromo-2-(2-methylphenyl)-4-oxoquinazolin-3(4H)-yl]methyl}piperidine-1-carboxylate [ No CAS ]
  • 17
  • [ 761458-01-9 ]
  • [ 140645-23-4 ]
  • [ 875269-86-6 ]
  • 18
  • [ 950908-66-4 ]
  • [ 140645-23-4 ]
  • tert-butyl (S)-3-[6-(4-chlorophenyl)-2-(2-methylphenyl)-4-oxoquinazolin-3(4H)-yl]methyl}piperidine-1-carboxylate [ No CAS ]
  • 19
  • [ 4692-98-2 ]
  • [ 140645-23-4 ]
  • [ 875269-73-1 ]
YieldReaction ConditionsOperation in experiment
86% With potassium carbonate; In tetrahydrofuran; at 70℃; for 20h;Product distribution / selectivity; Step 1 . Preparation of tert-butyl (3R)-3-ir(2-amino-5-bromobenzovl)amino1methvl|-piperidine-1 -carboxylate; O CH3[179] A mixture of 5-bromoisatoic anhydride (20.3 g, 84 mmol), tert-butyl (3R)-3-(aminomethyl)-piperidine-1-carboxylate (15.0 g, 70.0 mmol), potassium carbonate (19.3 g, 140 mmol), and THF(100 mL) was heated to 70C for 20 h, followed by cooling to it Water was added to give a clearbiphasic solution, and the mixture was stirred for 4 h while passing nitrogen through the reactionvessel to remove most of the organic solvent. The solid was collected by filtration, washed withcopious water, and air dried to give 24.9 g (86%) product. ES-MS m/z 312.3 ([MH2- BOC]+);HPLC RT (min) 3.26.
80% With potassium carbonate; In acetonitrile; at 70℃; for 15h;Product distribution / selectivity; Step 1. Preparation of tert-butyl (3R)-3-{f(2-amino-5-bromobenzoyl)amino1 methyl)piperidine-1 -carboxylate; O CH3-N^'O[409] A solution of 5-bromoisatoic anhydride (30 g, 111 mmol), (R)-N-BOC-piperidine-3-methyl-amine (25 g, 111 mmol), and K2CO3 (31 g, 223 mmol) in acetonitrile (750 mL) was heated at 70C for 15 h to form a white precipitate. The solvent was concentrated to -300 mL of volume, and water (600 mL) was added. After the mixture was stirred for 30 min, the precipitate was collected by filtration to afford 37 g (80%) of the product as a white solid. ES-MS m/z312.2 ([MH2 - BOCf), HPLC RT (min) 3.58.
  • 21
  • [ 140645-23-4 ]
  • [ 847831-98-5 ]
  • 22
  • [ 140645-23-4 ]
  • [ 697224-71-8 ]
  • 23
  • [ 140645-23-4 ]
  • 1-{1-[2-(4-fluoro-phenyl)-ethyl]-piperidin-3-ylmethyl}-3-[3-(1-methyl-1<i>H</i>-tetrazol-5-yl)-phenyl]-urea [ No CAS ]
  • 24
  • [ 140645-23-4 ]
  • 1-{1-[3-(4-fluoro-phenyl)-propyl]-piperidin-3-ylmethyl}-3-[3-(1-methyl-1<i>H</i>-tetrazol-5-yl)-phenyl]-urea [ No CAS ]
  • 25
  • [ 140645-23-4 ]
  • 1-[3-ethyl-5-(1-methyl-1<i>H</i>-tetrazol-5-yl)-phenyl]-3-{1-[2-(4-fluoro-phenyl)-ethyl]-piperidin-3-ylmethyl}-urea [ No CAS ]
  • 26
  • [ 140645-23-4 ]
  • 1-[3-ethyl-5-(1-methyl-1<i>H</i>-tetrazol-5-yl)-phenyl]-3-{1-[3-(4-fluoro-phenyl)-propyl]-piperidin-3-ylmethyl}-urea [ No CAS ]
  • 27
  • [ 140645-23-4 ]
  • N-(2-[3-([(3R)-1-ethyl-3-piperidinyl]methylamino)-3-oxopropyl]amino-2-oxoethyl)-3,3,3-triphenylpropioamide [ No CAS ]
  • 28
  • [ 140645-23-4 ]
  • N-(2-[3-([(3R)-1-butyl-3-piperidinyl]methylamino)-3-oxopropyl]amino-2-oxoethyl)-3,3,3-triphenylpropioamide [ No CAS ]
  • 29
  • [ 140645-23-4 ]
  • N-(2-[3-([(3R)-1-(cyclobutylmethyl)-3-piperidinyl]methylamino)-3-oxopropyl]amino-2-oxoethyl)-3,3,3-triphenylpropioamide [ No CAS ]
  • 30
  • [ 140645-23-4 ]
  • N-(2-[3-([(3R)-1-hexyl-3-piperidinyl]methylamino)-3-oxopropyl]amino-2-oxoethyl)-3,3,3-triphenylpropioamide [ No CAS ]
  • 31
  • [ 140645-23-4 ]
  • N-(2-[3-([(3R)-1-octyl-3-piperidinyl]methylamino)-3-oxopropyl]amino-2-oxoethyl)-3,3,3-triphenylpropioamide [ No CAS ]
  • 32
  • [ 140645-23-4 ]
  • N-(2-[3-([(3R)-1-(cyclooctylmethyl)-3-piperidinyl]methylamino)-3-oxopropyl]amino-2-oxoethyl)-3,3,3-triphenylpropioamide [ No CAS ]
  • 33
  • [ 140645-23-4 ]
  • [ 405161-02-6 ]
  • 34
  • [ 140645-23-4 ]
  • N-(2-[3-([(3R)-1-(cyclohexylmethyl)-3-piperidinyl]methylamino)-3-oxopropyl]amino-2-oxoethyl)3,3,3-triphenylpropioamide [ No CAS ]
  • 35
  • [ 140695-84-7 ]
  • [ 140645-23-4 ]
YieldReaction ConditionsOperation in experiment
g)2) Analogously to e), f) and g)1), from t-butyl (S)-3-hydroxymethyl-1-piperidinecarboxylate there is obtained t-butyl (R)-3-aminomethyl-1-piperidinecarboxylate, [alpha]D25 =+23.0 (c=0.4, EtOH).
 

Historical Records

Technical Information

Categories

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[ 140645-23-4 ]

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