Structure of 140645-23-4
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The BI-3802 was designed by Boehringer Ingelheim and could be obtained free of charge through the Boehringer Ingelheim open innovation portal opnMe.com, associated with its negative control.
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CAS No. : | 140645-23-4 |
Formula : | C11H22N2O2 |
M.W : | 214.30 |
SMILES Code : | NC[C@@H]1CN(C(OC(C)(C)C)=O)CCC1 |
MDL No. : | MFCD03839876 |
InChI Key : | WPWXYQIMXTUMJB-SECBINFHSA-N |
Pubchem ID : | 1502023 |
GHS Pictogram: |
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Signal Word: | Warning |
Hazard Statements: | H302 |
Precautionary Statements: | P280-P305+P351+P338 |
Num. heavy atoms | 15 |
Num. arom. heavy atoms | 0 |
Fraction Csp3 | 0.91 |
Num. rotatable bonds | 4 |
Num. H-bond acceptors | 3.0 |
Num. H-bond donors | 1.0 |
Molar Refractivity | 64.11 |
TPSA ? Topological Polar Surface Area: Calculated from |
55.56 Ų |
Log Po/w (iLOGP)? iLOGP: in-house physics-based method implemented from |
2.71 |
Log Po/w (XLOGP3)? XLOGP3: Atomistic and knowledge-based method calculated by |
0.92 |
Log Po/w (WLOGP)? WLOGP: Atomistic method implemented from |
1.21 |
Log Po/w (MLOGP)? MLOGP: Topological method implemented from |
1.15 |
Log Po/w (SILICOS-IT)? SILICOS-IT: Hybrid fragmental/topological method calculated by |
0.69 |
Consensus Log Po/w? Consensus Log Po/w: Average of all five predictions |
1.34 |
Log S (ESOL):? ESOL: Topological method implemented from |
-1.48 |
Solubility | 7.03 mg/ml ; 0.0328 mol/l |
Class? Solubility class: Log S scale |
Very soluble |
Log S (Ali)? Ali: Topological method implemented from |
-1.67 |
Solubility | 4.55 mg/ml ; 0.0212 mol/l |
Class? Solubility class: Log S scale |
Very soluble |
Log S (SILICOS-IT)? SILICOS-IT: Fragmental method calculated by |
-1.33 |
Solubility | 10.1 mg/ml ; 0.0471 mol/l |
Class? Solubility class: Log S scale |
Soluble |
GI absorption? Gatrointestinal absorption: according to the white of the BOILED-Egg |
High |
BBB permeant? BBB permeation: according to the yolk of the BOILED-Egg |
Yes |
P-gp substrate? P-glycoprotein substrate: SVM model built on 1033 molecules (training set) |
No |
CYP1A2 inhibitor? Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set) |
No |
CYP2C19 inhibitor? Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set) |
No |
CYP2C9 inhibitor? Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set) |
No |
CYP2D6 inhibitor? Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set) |
No |
CYP3A4 inhibitor? Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set) |
No |
Log Kp (skin permeation)? Skin permeation: QSPR model implemented from |
-6.95 cm/s |
Lipinski? Lipinski (Pfizer) filter: implemented from |
0.0 |
Ghose? Ghose filter: implemented from |
None |
Veber? Veber (GSK) filter: implemented from |
0.0 |
Egan? Egan (Pharmacia) filter: implemented from |
0.0 |
Muegge? Muegge (Bayer) filter: implemented from |
0.0 |
Bioavailability Score? Abbott Bioavailability Score: Probability of F > 10% in rat |
0.55 |
PAINS? Pan Assay Interference Structures: implemented from |
0.0 alert |
Brenk? Structural Alert: implemented from |
0.0 alert: heavy_metal |
Leadlikeness? Leadlikeness: implemented from |
No; 1 violation:MW<1.0 |
Synthetic accessibility? Synthetic accessibility score: from 1 (very easy) to 10 (very difficult) |
2.7 |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
74% | With triethylamine; In dichloromethane; at 0 - 20℃; for 16h; | (R)-tert-Butyl 3-(aminomethyl)piperidine-l-carboxylate (1.00 g, 4.67 mmol) wasdissolved in 14 mL anhydrous CH2CI2 under an N2 atmosphere and cooled to 0 C. Triethylamine (1.30 mL, 945 mg, 9.34 mmol) was added followed by the dropwise addition of benzyl chloroformate (0.99 mL, 1.20 g, 7.00 mmol). After 16 h, the reaction was complete. The mixture was partitioned between H2O and CH2CI2, and separated, and the aqueous layer was extracted twice with CH2CI2. The organic layers were combined, dried over Na2S04, filtered, and concentrated to a light yellow oil. Purification via silica gel chromatography using 97% CH2Cl2/3% MeOH gave, benzyl ((i?)-l-(tert-butoxycarbonyl)piperidin-3-yl)methylcarbamate as a clear colorless oil (1.2 g, 74%). LC/MS: m/z 349.5 (M+H)+ at 3.21 min (10%-99% CH3CN (0.035% TFA)/H20 (0.05% TFA)). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With 5%-palladium/activated carbon; hydrogen; In methanol; at 20℃; for 9h; | (R)-tert-butyl3-(aminomethyl)piperidine-1 -carboxylate._(S)-tert-butyl 3-(azidomethyl)piperidine- 1 -carboxylate (5.38 g, 22.40 mmol) was dissolved in MeOH (50 ml), and then Pd/C (5% mol) was added, followed by stirring at room temperature under H2 (gas) for 9 hours. After the completion of the reaction, the reaction mixture was filtered through celite, followed by filtration and concentration under reduced pressure, and then the next reaction was advanced without purification.10238] ?H-NMR (300 MHz, CDC13) oe 4.02-3.73 (m, 2H),2.94-2.73 (m, 1H), 2.72-2.33 (m, 3H), 1.90-1.02 (m, 5H),1.44 (s, 9H) | |
With palladium on activated charcoal; hydrogen; In methanol; at 20℃; for 9h; | [0368] (S) -tert-butyl 3- (azidomethyl) piperidine-1-carboxylate (5.38 g, 22.40 mmol) was dissolved in MeOH (50 ml) Pd / C (5% mol) And the mixture was stirred under H2 (gas) at room temperature for 9 hours. After completion of the reaction, after the Celite filter, Filtered, concentrated under reduced pressure, and the following reaction was carried out without purification | |
With hydrogenchloride; sodium hydroxide; triphenylphosphine; In hydrous tetrahydrofuran; | (Step 6) Synthesis of (3R)-3-aminomethyl-1-(tert-butoxycarbonyl)-piperidine To a solution of 600 mg of (3S)-3-azidomethyl-1-(tert-butoxycarbonyl)piperidine in 12.5 ml of 20% hydrous tetrahydrofuran, 622 mg of triphenylphosphine was added at room temperature, followed by 45 minutes' refluxing under heating. The reaction liquid was rendered acidic by addition of 0.5 N hydrochloric acid, and successively washed with chloroform and ethyl acetate. Then 4N aqueous sodium hydroxide solution was added to the aqueous layer to render the latter basic, followed by extraction with chloroform and drying over anhydrous sodium sulfate. Distilling the solvent off under reduced pressure, 497 mg of the title compound was obtained. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
86% | With potassium carbonate; In tetrahydrofuran; at 70℃; for 20h;Product distribution / selectivity; | Step 1 . Preparation of tert-butyl (3R)-3-ir(2-amino-5-bromobenzovl)amino1methvl|-piperidine-1 -carboxylate; O CH3[179] A mixture of 5-bromoisatoic anhydride (20.3 g, 84 mmol), tert-butyl (3R)-3-(aminomethyl)-piperidine-1-carboxylate (15.0 g, 70.0 mmol), potassium carbonate (19.3 g, 140 mmol), and THF(100 mL) was heated to 70C for 20 h, followed by cooling to it Water was added to give a clearbiphasic solution, and the mixture was stirred for 4 h while passing nitrogen through the reactionvessel to remove most of the organic solvent. The solid was collected by filtration, washed withcopious water, and air dried to give 24.9 g (86%) product. ES-MS m/z 312.3 ([MH2- BOC]+);HPLC RT (min) 3.26. |
80% | With potassium carbonate; In acetonitrile; at 70℃; for 15h;Product distribution / selectivity; | Step 1. Preparation of tert-butyl (3R)-3-{f(2-amino-5-bromobenzoyl)amino1 methyl)piperidine-1 -carboxylate; O CH3-N^'O[409] A solution of 5-bromoisatoic anhydride (30 g, 111 mmol), (R)-N-BOC-piperidine-3-methyl-amine (25 g, 111 mmol), and K2CO3 (31 g, 223 mmol) in acetonitrile (750 mL) was heated at 70C for 15 h to form a white precipitate. The solvent was concentrated to -300 mL of volume, and water (600 mL) was added. After the mixture was stirred for 30 min, the precipitate was collected by filtration to afford 37 g (80%) of the product as a white solid. ES-MS m/z312.2 ([MH2 - BOCf), HPLC RT (min) 3.58. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
g)2) Analogously to e), f) and g)1), from t-butyl (S)-3-hydroxymethyl-1-piperidinecarboxylate there is obtained t-butyl (R)-3-aminomethyl-1-piperidinecarboxylate, [alpha]D25 =+23.0 (c=0.4, EtOH). |
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