Structure of 903555-98-6
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The BI-3802 was designed by Boehringer Ingelheim and could be obtained free of charge through the Boehringer Ingelheim open innovation portal opnMe.com, associated with its negative control.
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CAS No. : | 903555-98-6 |
Formula : | C14H18BrNO2 |
M.W : | 312.20 |
SMILES Code : | O=C(OC(C)(C)C)N[C@@H]1CCC2=C1C=CC(Br)=C2 |
MDL No. : | MFCD29058912 |
InChI Key : | LFSNVJDYBBIPHH-GFCCVEGCSA-N |
Pubchem ID : | 58686168 |
GHS Pictogram: |
![]() |
Signal Word: | Warning |
Hazard Statements: | H302 |
Precautionary Statements: | P264-P270-P301+P312-P330 |
Num. heavy atoms | 18 |
Num. arom. heavy atoms | 6 |
Fraction Csp3 | 0.5 |
Num. rotatable bonds | 4 |
Num. H-bond acceptors | 2.0 |
Num. H-bond donors | 1.0 |
Molar Refractivity | 75.32 |
TPSA ? Topological Polar Surface Area: Calculated from |
38.33 Ų |
Log Po/w (iLOGP)? iLOGP: in-house physics-based method implemented from |
3.16 |
Log Po/w (XLOGP3)? XLOGP3: Atomistic and knowledge-based method calculated by |
3.54 |
Log Po/w (WLOGP)? WLOGP: Atomistic method implemented from |
3.64 |
Log Po/w (MLOGP)? MLOGP: Topological method implemented from |
3.18 |
Log Po/w (SILICOS-IT)? SILICOS-IT: Hybrid fragmental/topological method calculated by |
3.17 |
Consensus Log Po/w? Consensus Log Po/w: Average of all five predictions |
3.34 |
Log S (ESOL):? ESOL: Topological method implemented from |
-3.99 |
Solubility | 0.0321 mg/ml ; 0.000103 mol/l |
Class? Solubility class: Log S scale |
Soluble |
Log S (Ali)? Ali: Topological method implemented from |
-4.03 |
Solubility | 0.0292 mg/ml ; 0.0000934 mol/l |
Class? Solubility class: Log S scale |
Moderately soluble |
Log S (SILICOS-IT)? SILICOS-IT: Fragmental method calculated by |
-4.78 |
Solubility | 0.00515 mg/ml ; 0.0000165 mol/l |
Class? Solubility class: Log S scale |
Moderately soluble |
GI absorption? Gatrointestinal absorption: according to the white of the BOILED-Egg |
High |
BBB permeant? BBB permeation: according to the yolk of the BOILED-Egg |
Yes |
P-gp substrate? P-glycoprotein substrate: SVM model built on 1033 molecules (training set) |
No |
CYP1A2 inhibitor? Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set) |
Yes |
CYP2C19 inhibitor? Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set) |
Yes |
CYP2C9 inhibitor? Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set) |
Yes |
CYP2D6 inhibitor? Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set) |
No |
CYP3A4 inhibitor? Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set) |
No |
Log Kp (skin permeation)? Skin permeation: QSPR model implemented from |
-5.69 cm/s |
Lipinski? Lipinski (Pfizer) filter: implemented from |
0.0 |
Ghose? Ghose filter: implemented from |
None |
Veber? Veber (GSK) filter: implemented from |
0.0 |
Egan? Egan (Pharmacia) filter: implemented from |
0.0 |
Muegge? Muegge (Bayer) filter: implemented from |
0.0 |
Bioavailability Score? Abbott Bioavailability Score: Probability of F > 10% in rat |
0.55 |
PAINS? Pan Assay Interference Structures: implemented from |
0.0 alert |
Brenk? Structural Alert: implemented from |
0.0 alert: heavy_metal |
Leadlikeness? Leadlikeness: implemented from |
No; 1 violation:MW<1.0 |
Synthetic accessibility? Synthetic accessibility score: from 1 (very easy) to 10 (very difficult) |
2.8 |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
47% | tetrakis(triphenylphosphine) palladium(0); In N,N-dimethyl-formamide; at 110℃; for 18h; | A mixture of <strong>[903555-98-6](5-bromo-indan-1-yl)-carbamic acid tert-butyl ester</strong> (460 mg), Pd(PPh3)4 (89 mg), Zn(CN)2 (200 mg), and DMF (5 mL) under an atmosphere of Ar in a sealed vial was allowed to stir at 110 C. for 18 h. The mixture was allowed to cool to 22 C., Et2O (20 mL) and water (20 mL) were added. The aqueous layer was washed four times with Et2O (10 mL). The combined organic layers were washed three times with water (10 mL), once with brine (10 mL), dried over MgSO4, filtered and concentrated. The resulting residue was purified by silica gel chromatography (4:1 hexanes: ethyl acetate, Rf=0.2) to afford a clear oil (170 mg; 47%). [MH]+=259. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
9.8 g; 7.4 g | With ChiralPak T101 column; In isopropyl alcohol; acetonitrile;Resolution of racemate; | Intermediate 225 (18 g) was purified by high pressure chromatography on a chiral support (ChiralPak T101 column, eluant iPrOH/CH3CN 10/90, detection: 275 nm) to give enantiomers 615a (9.8 g) and 615b (7.4 g). Intermediate 615a: αD (589 nM)=76.78 (c=0.011 g/mL, MeOH) at 20 C. Intermediate 615b: αD (589 nM)=-77.52 (c=0.011 g/mL, MeOH) at 20 C. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
94% | With chloro(2-dicyclohexylphosphino-2’,4’,6’-triisopropyl-1,1‘-biphenyl)[2-(2’-amino-1,1‘-biphenyl’)]palladium(II); potassium acetate; XPhos; In 1,4-dioxane; water; at 105℃; for 5h; | To a solution of <strong>[903555-98-6]tert-butyl N-[(1R)-5-bromo-2,3-dihydro-1H-inden-1-yl]carbamate</strong> (25.5 g, 81.7 mmol, 1.00 equiv) in dioxane (270 mL) were added K4Fe(CN)6.3H2O (17.3 g, 41 mmol, 0.50 equiv), 2nd Generation XPhos precatalyst (965 mg, 1.23 mmol, 0.02 equiv), X-phos (584 mg, 1.22 mmol, 0.01 equiv), and a solution of KOAc (16.0 g, 163 mmol, 2.00 equiv) in water (270 mL) under nitrogen. After stirring at 105 oC for 5 h, the resulting solution was diluted with EA (500 mL). The solids were removed by filtration. The filtrate was separated and the aqueous layer was extracted with EA (300 mL) twice. The combined organic layers were washed with brine (300 mL), dried over anhydrous sodium sulfate, and concentrated under reduced pressure. The residue was purified by silica gel chromatography (EA/PE, 15/85) to give 20 g (94%) of tert-butyl N-[(1R)-5-cyano-2,3-dihydro-1H-inden-1- yl]carbamate as a white solid. LRMS (ES) m/z 259 (M+H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
92% | With triethylamine; In dichloromethane; at 0 - 20℃; for 3h; | To a solution of (1R)-5-bromo-2,3-dihydro-1H-inden-1-amine hydrochloride (44.4 g, 178.8 mmol, 1 equiv) in DCM (330 mL) at 0 oC was added TEA (39.8 g, 393.3 mmol, 2.2 equiv) and a solution of (Boc)2O (42.9 g, 196.3 mmol, 1.1 equiv) in DCM (120 mL) dropwise over a period of 1 h. The mixture was stirred at r.t. for 3 h. Water (500 mL) was added and the mixture was extracted with DCM (500 mL) twice. The combined organic layers were washed twice with aqueous NH4Cl solution (500 mL) and twice with brine (500 mL), dried over anhydrous sodium sulfate, and concentrated under reduced pressure to give 57.4 g (92%) of tert-butyl N-[(1R)-5-bromo-2,3-dihydro-1H-inden-1-yl]carbamate as white solid. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
90% | To a solution of <strong>[903555-98-6]tert-butyl N-[(1R)-5-bromo-2,3-dihydro-1H-inden-1-yl]carbamate</strong> (2 g, 6.4 mmol, 1.0 equiv) in THF (30 mL) cooled to -78oC was added MeLi (4.8 mL, 1.6 M) dropwise at -78oC under argon. The mixture was stirred at -78 oC for 15 min and n-BuLi (5.2 mL, 2.5 M) was added dropwise. The mixture was then stirred for 1h at -78 oC and DMF (1.43 g, 19.2 mmol, 3.0 equiv) was added dropwise. The solution was stirred for 1h at -78 oC, quenched with a saturated NH4Cl solution (5 mL), and concentrated under vacuum. The residue was purified by silica gel chromatography (EA/PE, 1/10) to give 1.5 g (90%) of tert- butyl N-[(1R)-5-formyl-2,3-dihydro-1H-inden-1-yl]carbamate as a yellow solid. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
70% | To a solution of <strong>[903555-98-6]tert-butyl N-[(1R)-5-bromo-2,3-dihydro-1H-inden-1-yl]carbamate</strong> (10 g, 32.2 mmol, 1.0 equiv) in THF (300 mL) cooled to -78 oC was added MeLi (30.1 mL, 1.6 M, 1.5 equiv) dropwise. The mixture was stirred at -78 oC for 10 min and n-BuLi (25.7 mL, 2.5 M, 2.0 equiv) was added dropwise at -78 oC. The mixture was stirred for an additional hour at -78 oC and dry ice (30 g) was added. The mixture was then stirred for 30 min at -78 oC and quenched by adding saturated NH4Cl solution (30 mL) at -78 oC slowly. The resulting solution was warmed to r.t. and extracted with EA (400 mL) twice. The combined organic layers were concentrated under reduced pressure and triturated with a mixture of EA, PE, and ethyl ether (1/20/10) to afford 6.2 g (70%) of (1R)-1-[[(tert- butoxy)carbonyl]amino]-2,3-dihydro-1H-indene-5-carboxylic acid as a white solid. |
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