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Structure of 903555-98-6

Chemical Structure| 903555-98-6

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Product Details of [ 903555-98-6 ]

CAS No. :903555-98-6
Formula : C14H18BrNO2
M.W : 312.20
SMILES Code : O=C(OC(C)(C)C)N[C@@H]1CCC2=C1C=CC(Br)=C2
MDL No. :MFCD29058912
InChI Key :LFSNVJDYBBIPHH-GFCCVEGCSA-N
Pubchem ID :58686168

Safety of [ 903555-98-6 ]

GHS Pictogram:
Signal Word:Warning
Hazard Statements:H302
Precautionary Statements:P264-P270-P301+P312-P330

Computational Chemistry of [ 903555-98-6 ] Show Less

Physicochemical Properties

Num. heavy atoms 18
Num. arom. heavy atoms 6
Fraction Csp3 0.5
Num. rotatable bonds 4
Num. H-bond acceptors 2.0
Num. H-bond donors 1.0
Molar Refractivity 75.32
TPSA ?

Topological Polar Surface Area: Calculated from
Ertl P. et al. 2000 J. Med. Chem.

38.33 Ų

Lipophilicity

Log Po/w (iLOGP)?

iLOGP: in-house physics-based method implemented from
Daina A et al. 2014 J. Chem. Inf. Model.

3.16
Log Po/w (XLOGP3)?

XLOGP3: Atomistic and knowledge-based method calculated by
XLOGP program, version 3.2.2, courtesy of CCBG, Shanghai Institute of Organic Chemistry

3.54
Log Po/w (WLOGP)?

WLOGP: Atomistic method implemented from
Wildman SA and Crippen GM. 1999 J. Chem. Inf. Model.

3.64
Log Po/w (MLOGP)?

MLOGP: Topological method implemented from
Moriguchi I. et al. 1992 Chem. Pharm. Bull.
Moriguchi I. et al. 1994 Chem. Pharm. Bull.
Lipinski PA. et al. 2001 Adv. Drug. Deliv. Rev.

3.18
Log Po/w (SILICOS-IT)?

SILICOS-IT: Hybrid fragmental/topological method calculated by
FILTER-IT program, version 1.0.2, courtesy of SILICOS-IT, http://www.silicos-it.com

3.17
Consensus Log Po/w?

Consensus Log Po/w: Average of all five predictions

3.34

Water Solubility

Log S (ESOL):?

ESOL: Topological method implemented from
Delaney JS. 2004 J. Chem. Inf. Model.

-3.99
Solubility 0.0321 mg/ml ; 0.000103 mol/l
Class?

Solubility class: Log S scale
Insoluble < -10 < Poorly < -6 < Moderately < -4 < Soluble < -2 Very < 0 < Highly

Soluble
Log S (Ali)?

Ali: Topological method implemented from
Ali J. et al. 2012 J. Chem. Inf. Model.

-4.03
Solubility 0.0292 mg/ml ; 0.0000934 mol/l
Class?

Solubility class: Log S scale
Insoluble < -10 < Poorly < -6 < Moderately < -4 < Soluble < -2 Very < 0 < Highly

Moderately soluble
Log S (SILICOS-IT)?

SILICOS-IT: Fragmental method calculated by
FILTER-IT program, version 1.0.2, courtesy of SILICOS-IT, http://www.silicos-it.com

-4.78
Solubility 0.00515 mg/ml ; 0.0000165 mol/l
Class?

Solubility class: Log S scale
Insoluble < -10 < Poorly < -6 < Moderately < -4 < Soluble < -2 Very < 0 < Highly

Moderately soluble

Pharmacokinetics

GI absorption?

Gatrointestinal absorption: according to the white of the BOILED-Egg

High
BBB permeant?

BBB permeation: according to the yolk of the BOILED-Egg

Yes
P-gp substrate?

P-glycoprotein substrate: SVM model built on 1033 molecules (training set)
and tested on 415 molecules (test set)
10-fold CV: ACC=0.72 / AUC=0.77
External: ACC=0.88 / AUC=0.94

No
CYP1A2 inhibitor?

Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set)
and tested on 3000 molecules (test set)
10-fold CV: ACC=0.83 / AUC=0.90
External: ACC=0.84 / AUC=0.91

Yes
CYP2C19 inhibitor?

Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set)
and tested on 3000 molecules (test set)
10-fold CV: ACC=0.80 / AUC=0.86
External: ACC=0.80 / AUC=0.87

Yes
CYP2C9 inhibitor?

Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set)
and tested on 2075 molecules (test set)
10-fold CV: ACC=0.78 / AUC=0.85
External: ACC=0.71 / AUC=0.81

Yes
CYP2D6 inhibitor?

Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set)
and tested on 1068 molecules (test set)
10-fold CV: ACC=0.79 / AUC=0.85
External: ACC=0.81 / AUC=0.87

No
CYP3A4 inhibitor?

Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set)
and tested on 2579 molecules (test set)
10-fold CV: ACC=0.77 / AUC=0.85
External: ACC=0.78 / AUC=0.86

No
Log Kp (skin permeation)?

Skin permeation: QSPR model implemented from
Potts RO and Guy RH. 1992 Pharm. Res.

-5.69 cm/s

Druglikeness

Lipinski?

Lipinski (Pfizer) filter: implemented from
Lipinski CA. et al. 2001 Adv. Drug Deliv. Rev.
MW ≤ 500
MLOGP ≤ 4.15
N or O ≤ 10
NH or OH ≤ 5

0.0
Ghose?

Ghose filter: implemented from
Ghose AK. et al. 1999 J. Comb. Chem.
160 ≤ MW ≤ 480
-0.4 ≤ WLOGP ≤ 5.6
40 ≤ MR ≤ 130
20 ≤ atoms ≤ 70

None
Veber?

Veber (GSK) filter: implemented from
Veber DF. et al. 2002 J. Med. Chem.
Rotatable bonds ≤ 10
TPSA ≤ 140

0.0
Egan?

Egan (Pharmacia) filter: implemented from
Egan WJ. et al. 2000 J. Med. Chem.
WLOGP ≤ 5.88
TPSA ≤ 131.6

0.0
Muegge?

Muegge (Bayer) filter: implemented from
Muegge I. et al. 2001 J. Med. Chem.
200 ≤ MW ≤ 600
-2 ≤ XLOGP ≤ 5
TPSA ≤ 150
Num. rings ≤ 7
Num. carbon > 4
Num. heteroatoms > 1
Num. rotatable bonds ≤ 15
H-bond acc. ≤ 10
H-bond don. ≤ 5

0.0
Bioavailability Score?

Abbott Bioavailability Score: Probability of F > 10% in rat
implemented from
Martin YC. 2005 J. Med. Chem.

0.55

Medicinal Chemistry

PAINS?

Pan Assay Interference Structures: implemented from
Baell JB. & Holloway GA. 2010 J. Med. Chem.

0.0 alert
Brenk?

Structural Alert: implemented from
Brenk R. et al. 2008 ChemMedChem

0.0 alert: heavy_metal
Leadlikeness?

Leadlikeness: implemented from
Teague SJ. 1999 Angew. Chem. Int. Ed.
250 ≤ MW ≤ 350
XLOGP ≤ 3.5
Num. rotatable bonds ≤ 7

No; 1 violation:MW<1.0
Synthetic accessibility?

Synthetic accessibility score: from 1 (very easy) to 10 (very difficult)
based on 1024 fragmental contributions (FP2) modulated by size and complexity penaties,
trained on 12'782'590 molecules and tested on 40 external molecules (r2 = 0.94)

2.8

Application In Synthesis of [ 903555-98-6 ]

* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.

  • Downstream synthetic route of [ 903555-98-6 ]

[ 903555-98-6 ] Synthesis Path-Downstream   1~32

  • 1
  • [ 903555-98-6 ]
  • [ 557-21-1 ]
  • [ 903555-99-7 ]
YieldReaction ConditionsOperation in experiment
47% tetrakis(triphenylphosphine) palladium(0); In N,N-dimethyl-formamide; at 110℃; for 18h; A mixture of <strong>[903555-98-6](5-bromo-indan-1-yl)-carbamic acid tert-butyl ester</strong> (460 mg), Pd(PPh3)4 (89 mg), Zn(CN)2 (200 mg), and DMF (5 mL) under an atmosphere of Ar in a sealed vial was allowed to stir at 110 C. for 18 h. The mixture was allowed to cool to 22 C., Et2O (20 mL) and water (20 mL) were added. The aqueous layer was washed four times with Et2O (10 mL). The combined organic layers were washed three times with water (10 mL), once with brine (10 mL), dried over MgSO4, filtered and concentrated. The resulting residue was purified by silica gel chromatography (4:1 hexanes: ethyl acetate, Rf=0.2) to afford a clear oil (170 mg; 47%). [MH]+=259.
  • 2
  • [ 903555-95-3 ]
  • [ 903555-98-6 ]
  • [ 903557-31-3 ]
YieldReaction ConditionsOperation in experiment
9.8 g; 7.4 g With ChiralPak T101 column; In isopropyl alcohol; acetonitrile;Resolution of racemate; Intermediate 225 (18 g) was purified by high pressure chromatography on a chiral support (ChiralPak T101 column, eluant iPrOH/CH3CN 10/90, detection: 275 nm) to give enantiomers 615a (9.8 g) and 615b (7.4 g). Intermediate 615a: αD (589 nM)=76.78 (c=0.011 g/mL, MeOH) at 20 C. Intermediate 615b: αD (589 nM)=-77.52 (c=0.011 g/mL, MeOH) at 20 C.
  • 3
  • [ 903555-98-6 ]
  • potassiumhexacyanoferrate(II) trihydrate [ No CAS ]
  • [ 903555-99-7 ]
YieldReaction ConditionsOperation in experiment
94% With chloro(2-dicyclohexylphosphino-2’,4’,6’-triisopropyl-1,1‘-biphenyl)[2-(2’-amino-1,1‘-biphenyl’)]palladium(II); potassium acetate; XPhos; In 1,4-dioxane; water; at 105℃; for 5h; To a solution of <strong>[903555-98-6]tert-butyl N-[(1R)-5-bromo-2,3-dihydro-1H-inden-1-yl]carbamate</strong> (25.5 g, 81.7 mmol, 1.00 equiv) in dioxane (270 mL) were added K4Fe(CN)6.3H2O (17.3 g, 41 mmol, 0.50 equiv), 2nd Generation XPhos precatalyst (965 mg, 1.23 mmol, 0.02 equiv), X-phos (584 mg, 1.22 mmol, 0.01 equiv), and a solution of KOAc (16.0 g, 163 mmol, 2.00 equiv) in water (270 mL) under nitrogen. After stirring at 105 oC for 5 h, the resulting solution was diluted with EA (500 mL). The solids were removed by filtration. The filtrate was separated and the aqueous layer was extracted with EA (300 mL) twice. The combined organic layers were washed with brine (300 mL), dried over anhydrous sodium sulfate, and concentrated under reduced pressure. The residue was purified by silica gel chromatography (EA/PE, 15/85) to give 20 g (94%) of tert-butyl N-[(1R)-5-cyano-2,3-dihydro-1H-inden-1- yl]carbamate as a white solid. LRMS (ES) m/z 259 (M+H).
  • 4
  • [ 24424-99-5 ]
  • (1R)-5-bromo-2,3-dihydro-1H-inden-1-amine hydrochloride [ No CAS ]
  • [ 903555-98-6 ]
YieldReaction ConditionsOperation in experiment
92% With triethylamine; In dichloromethane; at 0 - 20℃; for 3h; To a solution of (1R)-5-bromo-2,3-dihydro-1H-inden-1-amine hydrochloride (44.4 g, 178.8 mmol, 1 equiv) in DCM (330 mL) at 0 oC was added TEA (39.8 g, 393.3 mmol, 2.2 equiv) and a solution of (Boc)2O (42.9 g, 196.3 mmol, 1.1 equiv) in DCM (120 mL) dropwise over a period of 1 h. The mixture was stirred at r.t. for 3 h. Water (500 mL) was added and the mixture was extracted with DCM (500 mL) twice. The combined organic layers were washed twice with aqueous NH4Cl solution (500 mL) and twice with brine (500 mL), dried over anhydrous sodium sulfate, and concentrated under reduced pressure to give 57.4 g (92%) of tert-butyl N-[(1R)-5-bromo-2,3-dihydro-1H-inden-1-yl]carbamate as white solid.
  • 5
  • [ 903555-98-6 ]
  • (R)-N-(5-(3-(difluoromethyl)-1,2,4-oxadiazol-5-yl)-2,3-dihydro-1H-inden-1-yl)-1-methyl-1H-pyrazole-5-carboxamide [ No CAS ]
  • 6
  • [ 903555-98-6 ]
  • tert-butyl N-[(1R)-5-[[(1Z)-2,2-difluoro-1-(hydroxyimino)ethyl]carbamoyl]-2,3-dihydro-1H-inden-1-yl]carbamate [ No CAS ]
  • 7
  • [ 903555-98-6 ]
  • tert-butyl N-[(1R)-5-[3-(difluoromethyl)-1,2,4-oxadiazol-5-yl]-2,3-dihydro-1H-inden-1-yl]carbamate [ No CAS ]
  • 8
  • [ 903555-98-6 ]
  • (1R)-5-[3-(difluoromethyl)-1,2,4-oxadiazol-5-yl]-2,3-dihydro-1H-inden-1-amine [ No CAS ]
  • 9
  • [ 903555-98-6 ]
  • tert-butyl N-[(1R)-5-[(1E)-(hydroxyimino)methyl]-2,3-dihydro-1H-inden-1-yl]carbamate [ No CAS ]
  • 10
  • [ 903555-98-6 ]
  • tert-butyl N-[(1R)-5-[(1Z)-chloro(hydroxyimino)methyl]-2,3-dihydro-1H-inden-1-yl]carbamate [ No CAS ]
  • 11
  • [ 903555-98-6 ]
  • tert-butyl N-[(1R)-5-(5-ethyl-1,2-oxazol-3-yl)-2,3-dihydro-1H-inden-1-yl]carbamate [ No CAS ]
  • 12
  • [ 903555-98-6 ]
  • tert-butyl-N-[(1R)-5-[[(1Z)-cyclopropyl(hydroxyimino)methyl]carbamoyl]-2,3-dihydro-1H-inden-1-yl]carbamate [ No CAS ]
  • 13
  • [ 903555-98-6 ]
  • tert-butyl N-[(1R)-5-(3-cyclopropyl-1,2,4-oxadiazol-5-yl)-2,3-dihydro-1H-inden-1-yl]carbamate [ No CAS ]
  • 14
  • [ 903555-98-6 ]
  • [ 33513-42-7 ]
  • tert-butyl N-[(1R)-5-formyl-2,3-dihydro-1H-inden-1-yl]carbamate [ No CAS ]
YieldReaction ConditionsOperation in experiment
90% To a solution of <strong>[903555-98-6]tert-butyl N-[(1R)-5-bromo-2,3-dihydro-1H-inden-1-yl]carbamate</strong> (2 g, 6.4 mmol, 1.0 equiv) in THF (30 mL) cooled to -78oC was added MeLi (4.8 mL, 1.6 M) dropwise at -78oC under argon. The mixture was stirred at -78 oC for 15 min and n-BuLi (5.2 mL, 2.5 M) was added dropwise. The mixture was then stirred for 1h at -78 oC and DMF (1.43 g, 19.2 mmol, 3.0 equiv) was added dropwise. The solution was stirred for 1h at -78 oC, quenched with a saturated NH4Cl solution (5 mL), and concentrated under vacuum. The residue was purified by silica gel chromatography (EA/PE, 1/10) to give 1.5 g (90%) of tert- butyl N-[(1R)-5-formyl-2,3-dihydro-1H-inden-1-yl]carbamate as a yellow solid.
  • 15
  • [ 903555-98-6 ]
  • [ 124-38-9 ]
  • (1R)-1-[[(tert-butoxy)carbonyl]amino]-2,3-dihydro-1H-indene-5-carboxylic acid [ No CAS ]
YieldReaction ConditionsOperation in experiment
70% To a solution of <strong>[903555-98-6]tert-butyl N-[(1R)-5-bromo-2,3-dihydro-1H-inden-1-yl]carbamate</strong> (10 g, 32.2 mmol, 1.0 equiv) in THF (300 mL) cooled to -78 oC was added MeLi (30.1 mL, 1.6 M, 1.5 equiv) dropwise. The mixture was stirred at -78 oC for 10 min and n-BuLi (25.7 mL, 2.5 M, 2.0 equiv) was added dropwise at -78 oC. The mixture was stirred for an additional hour at -78 oC and dry ice (30 g) was added. The mixture was then stirred for 30 min at -78 oC and quenched by adding saturated NH4Cl solution (30 mL) at -78 oC slowly. The resulting solution was warmed to r.t. and extracted with EA (400 mL) twice. The combined organic layers were concentrated under reduced pressure and triturated with a mixture of EA, PE, and ethyl ether (1/20/10) to afford 6.2 g (70%) of (1R)-1-[[(tert- butoxy)carbonyl]amino]-2,3-dihydro-1H-indene-5-carboxylic acid as a white solid.
  • 16
  • [ 903555-98-6 ]
  • tert-butyl N-[(1R)-5-(N-hydroxycarbamimidoyl)-2,3-dihydro-1H-inden-1-yl]carbamate [ No CAS ]
  • 17
  • [ 903555-98-6 ]
  • tert-butyl N-[(1R)-5-[5-(difluoromethyl)-1,2,4-oxadiazol-3-yl]-2,3-dihydro-1H-inden-1-yl]carbamate [ No CAS ]
  • 18
  • [ 903555-98-6 ]
  • (R)-N-(5-(5-cyclopropyl-1,2,4-oxadiazol-3-yl)-2,3-dihydro-1H-inden-1-yl)-2-methyl-2H-tetrazole-5-carboxamide [ No CAS ]
  • 19
  • [ 903555-98-6 ]
  • (R)-N-(5-(5-ethyl-1,2,4-oxadiazol-3-yl)-2,3-dihydro-1H-inden-1-yl)-2-methyl-2H-tetrazole-5-carboxamide [ No CAS ]
  • 20
  • [ 903555-98-6 ]
  • tert-butyl N-[(1R)-5-(5-cyclopropyl-1,2,4-oxadiazol-3-yl)-2,3-dihydro-1H-inden-1-yl]carbamate [ No CAS ]
  • 21
  • [ 903555-98-6 ]
  • (1R)-5-(5-cyclopropyl-1,2,4-oxadiazol-3-yl)-2,3-dihydro-1H-inden-1-amine dihydrochloride [ No CAS ]
  • 22
  • [ 903555-98-6 ]
  • tert-butyl N-[(1R)-5-[5-(propan-2-yl)-1,2,4-oxadiazol-3-yl]-2,3-dihydro-1H-inden-1-yl]carbamate [ No CAS ]
  • 23
  • [ 903555-98-6 ]
  • tert-butyl N-[(1R)-5-(5-cyclobutyl-1,2,4-oxadiazol-3-yl)-2,3-dihydro-1H-inden-1-yl]carbamate [ No CAS ]
  • 24
  • [ 903555-98-6 ]
  • (R)-N-(5-(5-ethyl-1,2,4-oxadiazol-3-yl)-2,3-dihydro-1H-inden-1-yl)-1-methyl-1H-pyrazole-4-carboxamide [ No CAS ]
  • 25
  • [ 903555-98-6 ]
  • tert-butyl N-[(1R)-5-(5-ethyl-1,2,4-oxadiazol-3-yl)-2,3-dihydro-1H-inden-1-yl]carbamate [ No CAS ]
  • 26
  • [ 903555-98-6 ]
  • (1R)-5-(5-ethyl-1,2,4-oxadiazol-3-yl)-2,3-dihydro-1H-inden-1-amine [ No CAS ]
  • 27
  • [ 903555-98-6 ]
  • tert-butyl N-[(1R)-5-(5-methyl-1,2,4-oxadiazol-3-yl)-2,3-dihydro-1H-inden-1-yl]carbamate [ No CAS ]
  • 28
  • [ 903555-98-6 ]
  • (1R)-5-(5-methyl-1,2,4-oxadiazol-3-yl)-2,3-dihydro-1H-inden-1-amine [ No CAS ]
  • 29
  • [ 1270284-15-5 ]
  • [ 903555-98-6 ]
  • 30
  • [ 1334784-73-4 ]
  • [ 903555-98-6 ]
  • 31
  • [ 24424-99-5 ]
  • [ 1228561-27-0 ]
  • [ 903555-98-6 ]
  • 32
  • [ 34598-49-7 ]
  • [ 903555-98-6 ]
 

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