Structure of 885520-70-7
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CAS No. : | 885520-70-7 |
Formula : | C8H5BrFN |
M.W : | 214.03 |
SMILES Code : | FC1=CC2=C(C(Br)=C1)C=CN2 |
MDL No. : | MFCD08272203 |
InChI Key : | DMOWKZSCECYXSE-UHFFFAOYSA-N |
Pubchem ID : | 24728173 |
GHS Pictogram: |
![]() |
Signal Word: | Warning |
Hazard Statements: | H302-H315-H319-H332-H335 |
Precautionary Statements: | P261-P280-P305+P351+P338 |
Num. heavy atoms | 11 |
Num. arom. heavy atoms | 9 |
Fraction Csp3 | 0.0 |
Num. rotatable bonds | 0 |
Num. H-bond acceptors | 1.0 |
Num. H-bond donors | 1.0 |
Molar Refractivity | 45.96 |
TPSA ? Topological Polar Surface Area: Calculated from |
15.79 Ų |
Log Po/w (iLOGP)? iLOGP: in-house physics-based method implemented from |
1.91 |
Log Po/w (XLOGP3)? XLOGP3: Atomistic and knowledge-based method calculated by |
2.84 |
Log Po/w (WLOGP)? WLOGP: Atomistic method implemented from |
3.49 |
Log Po/w (MLOGP)? MLOGP: Topological method implemented from |
2.73 |
Log Po/w (SILICOS-IT)? SILICOS-IT: Hybrid fragmental/topological method calculated by |
3.62 |
Consensus Log Po/w? Consensus Log Po/w: Average of all five predictions |
2.92 |
Log S (ESOL):? ESOL: Topological method implemented from |
-3.56 |
Solubility | 0.0587 mg/ml ; 0.000274 mol/l |
Class? Solubility class: Log S scale |
Soluble |
Log S (Ali)? Ali: Topological method implemented from |
-2.83 |
Solubility | 0.317 mg/ml ; 0.00148 mol/l |
Class? Solubility class: Log S scale |
Soluble |
Log S (SILICOS-IT)? SILICOS-IT: Fragmental method calculated by |
-4.42 |
Solubility | 0.00812 mg/ml ; 0.0000379 mol/l |
Class? Solubility class: Log S scale |
Moderately soluble |
GI absorption? Gatrointestinal absorption: according to the white of the BOILED-Egg |
High |
BBB permeant? BBB permeation: according to the yolk of the BOILED-Egg |
Yes |
P-gp substrate? P-glycoprotein substrate: SVM model built on 1033 molecules (training set) |
No |
CYP1A2 inhibitor? Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set) |
Yes |
CYP2C19 inhibitor? Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set) |
No |
CYP2C9 inhibitor? Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set) |
No |
CYP2D6 inhibitor? Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set) |
No |
CYP3A4 inhibitor? Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set) |
No |
Log Kp (skin permeation)? Skin permeation: QSPR model implemented from |
-5.59 cm/s |
Lipinski? Lipinski (Pfizer) filter: implemented from |
0.0 |
Ghose? Ghose filter: implemented from |
None |
Veber? Veber (GSK) filter: implemented from |
0.0 |
Egan? Egan (Pharmacia) filter: implemented from |
0.0 |
Muegge? Muegge (Bayer) filter: implemented from |
1.0 |
Bioavailability Score? Abbott Bioavailability Score: Probability of F > 10% in rat |
0.55 |
PAINS? Pan Assay Interference Structures: implemented from |
0.0 alert |
Brenk? Structural Alert: implemented from |
0.0 alert: heavy_metal |
Leadlikeness? Leadlikeness: implemented from |
No; 1 violation:MW<1.0 |
Synthetic accessibility? Synthetic accessibility score: from 1 (very easy) to 10 (very difficult) |
1.85 |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
37% | With hydrazine In tetrahydrofuran; methanol; water at 20℃; for 5 h; | To a suspension of the pyrrolidine (10.0 g, 31.7 mmol) and Raney.(R).-Nickel (suspension in H20, 15 mL) in MeOH:THF (1:1, 150 mL) was added hydrazine monohydrate (2.3 mL, 47.4 mmol) at 0 0C and the mixture stirred at RT for 5 hours. The reaction mixture was then filtered through Celite and the filter cake washed with EtOAc. The filtrate was evaporated to dryness and the resulting residue to give the title compound as pale oil (2.57 g, 37 percent). NMR δH (300 MHz, CDCl3) 6.57 (apparent t, J = 2.7, IH), 7.04 (dd, J = 2.1, 9.1, IH), 7.12 (dd, J = 2.1, 9.1, IH), 7.20-7.25 (m, IH) and 8.25 (s, IH). |
37% | With hydrazine In tetrahydrofuran; methanol; water at 0 - 20℃; for 5 h; | Reference Example 44-Bromo-6-fluoro-lH-indoleTo a solution of l-bromo-5-fluoro-2-methyl-3-nitro-benzene (7.49 g, 31.8 mmol) in dioxane (40 mL) was added DMF-DMA (21.0 mL, 158 mmol) and pyrrolidine (2.6 mL, 31.1 mmol). The reaction mixture was heated at 100 °C. The mixture was cooled to RT and evaporated to dryness to give l-[2-(2-bromo-4-fluoro-6-nitro-phenyl)-l -methyl vinyl]- pyrrolidine as a dark red residue (10.0 g, theoretical yield). To a suspension of the pyrrolidine (10.0 g, 31.7 mmol) and Raney.(R).-Nickel (suspension in H2O, 15 mL) in MeOH:THF (1:1, 150 mL) was added hydrazine monohydrate (2.3 mL, 47.4 mmol) at 0 0C and the mixture stirred at RT for 5 hours. The reaction mixture was then filtered through Celite and the filter cake washed with EtOAc. The filtrate was evaporated to dryness and the resulting residue to give the title compound as pale oil (2.57 g, 37 percent).NMR δH (300 MHz, CDCl3) 6.57 (apparent t, J = 2.7, IH), 7.04 (dd, J = 2.1, 9.1, IH), 7.12 (dd, J = 2.1, 9.1, IH), 7.20-7.25 (m, IH) and 8.25 (s, IH). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
39% | Stage #1: at 20℃; Heating / reflux Stage #2: With iron; acetic acid In N,N-dimethyl-formamide for 0.666667 h; Heating / reflux Stage #3: With water; sodium carbonate In dichloromethane |
Intermediate 35; 4-Bromo-6-fluoro-lH-indole; l-Bromo-5-fluoro-2-methyl-3-nitrobenzene (2.00 g, 8.55 mmol) and(dimethoxymethyl)dimethylamine (5.66 mL, 42.7 mmol) in dry DMF (20 mL) was refiuxed under N2 for 8 h, then rt. over night. The mixture was diluted with DCM and extracted 5 times with water. The organic layer was dried, filtered and concentrated under reduced pressure. The residue was dissolved in AcOH (10 mL) and added drop wise to a boiling mixture of Fe(s, fine powder) in AcOH (10 mL). The mixture was refiuxed for 40 min., partitioned between DCM and saturated aq. Na2CO3/brine (the mixture was filtered through celite before phase separation). The water layer was extracted once more with DCM. The organic layers were combined, dried and concentrated. Purification was performed by flash column chromatography (DCM/hexane 1:3) and afforded the title compound (660 mg, 39percent) as a yellow oil. MS (ESI+) for C8H5BrFN m/z 214 (M+H)+. |
27% | Stage #1: With pyrrolidine In 1,4-dioxane at 20 - 100℃; for 18 h; Stage #2: With iron; acetic acid In 1,4-dioxane for 1 h; Reflux |
Example 41 N4-(5-Cyclobutyl- 1 H-pyrazol-3-yl)-N2-((6-fluoro- 1 H-indol-4-yl)methyl)pyrimidine-2,4-diamine Formate (1-88) step 1 : To a solution of l-bromo-5-fluoro-2-methyl-3-nitrobenzene (4.69 g, 20 mmol) in 1,4-dioxane (25 mL) at RT was slowly added DMF dimethylacetal (13.3 mL) and pyrrolidine (1.7 mL). The solution was heated at 100 °C for 18 h, then concentrated in vacuo to give a dark residue. To the residue was added HOAc (30 mL) and iron powder (11 g, 200 mmol) then the mixture was heated to reflux for 1 h, cooled to RT, neutralized by addition of 50percent aq. NaOH and extracted with EtOAc (2 x 200 mL). The combined organic extracts were dried (MgSO i), filtered and concentrated in vacuo. The residue was purified by Si02 chromatography eluting with an EtO Ac/petroleum ether gradient (5 to 30percent EtOAc) to afford 1.16 g (27percent) of 4-bromo-6-fluoro-lH-indole (224) -as brown solid: MS (ESI) m/z = 213.9 [M+l] +. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
800 mg | at 110℃; for 1.5 h; | An acetic acid (20 ml) solution containing the deep brown oily matter obtained in the 2nd step was added to amixture of iron powder (3.61 g) and acetic acid (20 ml) at 110°C for 30 minutes. The resulting mixture was stirred for 1hour and then diluted with ethyl acetate. Insoluble matter was removed by filtration with Celite, the filtrate was washedwith water and 1M hydrochloric acid (x3). The obtained organic layer was poured into a saturated aqueous sodiumhydrogen carbonate solution to separate the organic layer, and the organic layer was washed with water and saturated saline and dried over anhydrous sodium sulfate. Thereafter, activated carbon was added and insoluble matter wasremoved by filtration with Celite. The solvent was distilled away under reduced pressure, and light brown oily matter of4-bromo-6-fluoro-1H-indole (880 mg) was thus obtained.MS (ESI m/z): 214, 216 (M+H)RT (min): 1.561H-NMR (DMSO-d6, 300MHz) δ:11.53 (br, 1H), 7.46 (t, 1H, J = 3.0Hz), 7.24 (dd, 1H, J = 5.6, 3.0 Hz), 7.19 (dd, 1H, J =9.2, 2.0Hz), 6.39 (d, 1H, J = 2.0Hz) |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With hydrazine;Raney- Nickel; In tetrahydrofuran; methanol; water; for 24h;Product distribution / selectivity; | To a solution of crude l-[2-(2-bromo-4-fluoro-6-nitro-phenyl)-vinyl]- pyrrolidine (2.74 g) in tetrahydrofuran (25 ml) and methanol (25 ml) was added Raney nickel, 50% slurry in water, active catalyst (5.0 ml) followed by careful addition of hydrazine monohydrate (0.63 ml). After stirring for 24 hours the reaction mixture was filtered through celite and the filtrate reduced in vacuo. The residue was purified by flash chromatography to give 4-bromo-6-fluoro-l H-indole (0.80 g). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
800 mg | With iron; acetic acid; at 110℃; for 1.5h; | An acetic acid (20 ml) solution containing the deep brown oily matter obtained in the 2nd step was added to amixture of iron powder (3.61 g) and acetic acid (20 ml) at 110°C for 30 minutes. The resulting mixture was stirred for 1hour and then diluted with ethyl acetate. Insoluble matter was removed by filtration with Celite, the filtrate was washedwith water and 1M hydrochloric acid (x3). The obtained organic layer was poured into a saturated aqueous sodiumhydrogen carbonate solution to separate the organic layer, and the organic layer was washed with water and saturated saline and dried over anhydrous sodium sulfate. Thereafter, activated carbon was added and insoluble matter wasremoved by filtration with Celite. The solvent was distilled away under reduced pressure, and light brown oily matter of4-bromo-6-fluoro-1H-indole (880 mg) was thus obtained.MS (ESI m/z): 214, 216 (M+H)RT (min): 1.561H-NMR (DMSO-d6, 300MHz) delta:11.53 (br, 1H), 7.46 (t, 1H, J = 3.0Hz), 7.24 (dd, 1H, J = 5.6, 3.0 Hz), 7.19 (dd, 1H, J =9.2, 2.0Hz), 6.39 (d, 1H, J = 2.0Hz) |
With hydrazine;Raney.(R).- Nickel; In tetrahydrofuran; methanol; water; at 0 - 20℃; for 0.666667h;Product distribution / selectivity; | Reference Example 14; 4-Bromo-6-fluoro-ll?~indoIe; Prepared according to the method used in the preparation of 4-bromo-lT- indole-6-sulfonic acid dimethylamide using l-bromo-5-fluoro-2-methyl-3-nitro- benzene in place of 3-bromo-4-iV,N-trimethyl-5-nitro-benzenesulfonamide. The title compound was obtained as a white solid (6.06 g, 33 percent).NMR deltaH (300 MHz, CDCl3) 6.57 (apparent t, J = 2.7, IH), 7.04 (dd, J = 2.1, 9.I5 IH), 7.12 (dd, J = 2.1, 9.1, IH)5 7.20-7.25 (m, IH) and 8.25 (s, IH). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
39% | Intermediate 35; 4-Bromo-6-fluoro-lH-indole; l-Bromo-5-fluoro-2-methyl-3-nitrobenzene (2.00 g, 8.55 mmol) and(dimethoxymethyl)dimethylamine (5.66 mL, 42.7 mmol) in dry DMF (20 mL) was refiuxed under N2 for 8 h, then rt. over night. The mixture was diluted with DCM and extracted 5 times with water. The organic layer was dried, filtered and concentrated under reduced pressure. The residue was dissolved in AcOH (10 mL) and added drop wise to a boiling mixture of Fe(s, fine powder) in AcOH (10 mL). The mixture was refiuxed for 40 min., partitioned between DCM and saturated aq. Na2CO3/brine (the mixture was filtered through celite before phase separation). The water layer was extracted once more with DCM. The organic layers were combined, dried and concentrated. Purification was performed by flash column chromatography (DCM/hexane 1:3) and afforded the title compound (660 mg, 39percent) as a yellow oil. MS (ESI+) for C8H5BrFN m/z 214 (M+H)+. | |
27% | Example 41 N4-(5-Cyclobutyl- 1 H-pyrazol-3-yl)-N2-((6-fluoro- 1 H-indol-4-yl)methyl)pyrimidine-2,4-diamine Formate (1-88) step 1 : To a solution of l-bromo-5-fluoro-2-methyl-3-nitrobenzene (4.69 g, 20 mmol) in 1,4-dioxane (25 mL) at RT was slowly added DMF dimethylacetal (13.3 mL) and pyrrolidine (1.7 mL). The solution was heated at 100 °C for 18 h, then concentrated in vacuo to give a dark residue. To the residue was added HOAc (30 mL) and iron powder (11 g, 200 mmol) then the mixture was heated to reflux for 1 h, cooled to RT, neutralized by addition of 50percent aq. NaOH and extracted with EtOAc (2 x 200 mL). The combined organic extracts were dried (MgSO i), filtered and concentrated in vacuo. The residue was purified by Si02 chromatography eluting with an EtO Ac/petroleum ether gradient (5 to 30percent EtOAc) to afford 1.16 g (27percent) of 4-bromo-6-fluoro-lH-indole (224) -as brown solid: MS (ESI) m/z = 213.9 [M+l] +. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
100% | With sodium hydroxide; tetra(n-butyl)ammonium hydrogensulfate; In dichloromethane; water; for 1h; | Intermediate 36; 4-Bromo-6-fluoro-l-(phenylsulfonyl)-lH-indole; Aq. 4 M NaOH (5 mL) was added to a stirring mixture of 4-bromo-6-fluoro-lH-indole (500 mg, 2.34 mmol; Intermediate 35), benzenesulfonyl chloride (329 muL g, 2.57 mmol) and tetrabutylammonium hydrogen sulfate (78 mg, 0.23 mmol) in DCM (30 mL). The reaction mixture was stirred Ih, combined with an earlier batch of this intermediate (followed this experimental and starting with 4-bromo-6-fluoro-lH-indole, 152 mg, 0.71 mmol; Intermediate 35), washed twice with water, dried and concentrated. The product <n="93"/>(1.08 g, 100percent) was obtained as a beige solid. MS (ESI+) for Ci4H9BrFNO2S m/z 354 (M+H)+. |
79% | With sodium hydride; In tetrahydrofuran; mineral oil; at 20℃; for 4h;Inert atmosphere; | To a solution of 4-bromo-6-fluoro-indole (2 g, 9.38 mmol) in anhydrous tetrahydrofuran (30 mL) cooled in an ice bath was added sodium hydride (0.452 g, 11.3 mmol, 60percent in mineral oil). The reaction mixture was stirred under nitrogen for 10 min before benzenesulfonyl chloride (1.44 mL, 11.3 mmol) was added. The black solution was allowed to warm to room temperature over 4 h. TLC and LCMS indicated completion of the reaction. Saturated aqueous ammonium chloride solution was added slowly, and the resulting solution was extracted with ethyl acetate (2*). The combined organic phases were washed with brine, dried over anhydrous sodium sulfate, filtered, and concentrated in vacuo. The crude solid was triturated with ethanol. The resulting beige solid was collected by filtration to give 4-bromo-6-fluoro-1-(phenylsulfonyl)-1H-indole (2.6 g, 79percent yield). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
61% | With potassium acetate;(1,1'-bis(diphenylphosphino)ferrocene)palladium(II) dichloride; In dimethyl sulfoxide; at 80℃; for 18h; | To a solution of 4-bromo-6-fluoro-lH-indole (6.0 g, 25.53 mmol) and bis(pinacolato)diboron (9.7 g, 38.19 mmol) in anhydrous DMSO (120 mL) were added KOAc (7.5 g, 76.41 mmol) and [l,r-bis(diphenylphosphine)ferrocene]-dichloropalladium (1.0 g, 1.22 mmol). The mixture was heated at 80 °C for 18 h. The reaction mixture was cooled to RT and partioned between EtOAc and H2O. The organic layer was isolated, washed successively with H2O and brine, dried (Na2SO4) and concentrated in vacuo. The resulting residue was purified by column chromatography (silica gel, pentane:EtOAc 75:25) to provide the title compound as a white solid (4.6 g, 61 percent). <n="41"/>^NMR deltaH (300 MHz, CDCl3) 1.39 (s, 12H), 7.02 (m, IH), 7.14-7.19 (m, IH), 7.20-7.26 (m, IH), 7.38 (dd, J = 2.4, 9.9, IH) and 8.16 (s, IH). |
61% | With potassium acetate;(1,1'-bis(diphenylphosphino)ferrocene)palladium(II) dichloride; In dimethyl sulfoxide; at 80℃; for 18h; | To a solution of 4-bromo-6-fluoro-lH-indole (6.0 g, 25.53 mmol) and bis(pinacolato)diboron (9.7 g, 38.19 mmol) in anhydrous DMSO (120 mL) were added KOAc (7.5 g, 76.41 mmol) and [l,r-bis(diphenylphosphine)ferrocene]-dichloropalladium (1.0 g, 1.22 mmol). The mixture was heated at 80 °C for 18 h. The reaction mixture was cooled to RT and partioned between EtOAc and H2O. The organic layer was washed successively with H2O and brine, dried (Na2SO4) and concentrated in vacuo. The resulting residue was purified by column chromatography (silica gel, pentane:EtOAc 75:25) to provide the title compound as a white solid (4.6 g, 61 percent).NMR deltaH (300 MHz, CDCl3) 1.39 (s, 12H), 7.02 (m, IH), 7.14-7.19 (m, IH), 7.20-7.26 (m, IH), 7.38 (dd, J = 2.4, 9.9, IH) and 8.16 (s, IH). |
With potassium acetate;(1,1'-bis(diphenylphosphino)ferrocene)palladium(II) dichloride; In dimethyl sulfoxide; at 100℃; for 16h; | To a stirring mixture of 4-bromo-6-fluoro-lH-indole (6.76 g, 31.5 mmol), bis(pinacolato)diboron (12.8 g, 94.7 mmol) and potassium acetate (9.3 g, 94.7 mmol) in methyl sulfoxide (100 mL) was added l,r-bis(diphenylphosphine)ferrocene- dichloropalladium (1.29 g, 5 mol percent). The reaction mixture was flushed out with nitrogen and heated to 100 0C for 16 hours. The mixture was partitioned between ethyl acetate and water and the organic layer washed with brine, dried over MgSO4 and evaporated down. The crude product was purified by column chromatography followed by triturating to yield the title compound (7.87 g). deltaH(400MHz, CDCl3) 1.41 (s, 12H)5 7.04 (m, IH), 7.16 (dd, IH), 7.26 (t, IH)5 7.40 (dd, IH)5 8.14 (br S5 IH). |
With potassium acetate;(1,1'-bis(diphenylphosphino)ferrocene)palladium(II) dichloride; In dimethyl sulfoxide; at 100℃; for 16h; | Reference Example 56-FIuoro-4-(4,4,5,5-tetramethyl-[l,3,2]dioxaborolan-2-yl)-lH-indoleTo a stirring mixture of 4-bromo-6-fluoro-lH-indole (6.76 g, 31.5 mmol), bis(pinacolato)diboron (12.8 g, 94.7 mmol) and potassium acetate (9.3 g, 94.7 mmol) in methyl sulfoxide (100 mL) was added l,l'-bis(diphenylphosphine)ferrocene- dichloropalladium (1.29 g, 5 mol percent). The reaction mixture was flushed out with nitrogen and heated to 100 0C for 16 hours. The mixture was partitioned between ethyl acetate and water and the organic layer washed with brine, dried over MgSO4 and evaporated down. The crude <n="58"/>product was purified by column chromatography followed by triturating to yield the title compound (7.87 g). deltaH(400MHz, CDCl3) 1.41 (s, 12H), 7.04 (m, IH), 7.16 (dd, IH), 7.26 (t, IH), 7.40 (dd, IH), 8.14 (br s, IH). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
37% | With hydrazine;nickel; In tetrahydrofuran; methanol; water; at 20℃; for 5h; | To a suspension of the pyrrolidine (10.0 g, 31.7 mmol) and Raney.(R).-Nickel (suspension in H20, 15 mL) in MeOH:THF (1:1, 150 mL) was added hydrazine monohydrate (2.3 mL, 47.4 mmol) at 0 0C and the mixture stirred at RT for 5 hours. The reaction mixture was then filtered through Celite and the filter cake washed with EtOAc. The filtrate was evaporated to dryness and the resulting residue to give the title compound as pale oil (2.57 g, 37 percent). NMR deltaH (300 MHz, CDCl3) 6.57 (apparent t, J = 2.7, IH), 7.04 (dd, J = 2.1, 9.1, IH), 7.12 (dd, J = 2.1, 9.1, IH), 7.20-7.25 (m, IH) and 8.25 (s, IH). |
37% | With hydrazine;Raney.(R).-Nickel; In tetrahydrofuran; methanol; water; at 0 - 20℃; for 5h; | Reference Example 44-Bromo-6-fluoro-lH-indoleTo a solution of l-bromo-5-fluoro-2-methyl-3-nitro-benzene (7.49 g, 31.8 mmol) in dioxane (40 mL) was added DMF-DMA (21.0 mL, 158 mmol) and pyrrolidine (2.6 mL, 31.1 mmol). The reaction mixture was heated at 100 °C. The mixture was cooled to RT and evaporated to dryness to give l-[2-(2-bromo-4-fluoro-6-nitro-phenyl)-l -methyl vinyl]- pyrrolidine as a dark red residue (10.0 g, theoretical yield). To a suspension of the pyrrolidine (10.0 g, 31.7 mmol) and Raney.(R).-Nickel (suspension in H2O, 15 mL) in MeOH:THF (1:1, 150 mL) was added hydrazine monohydrate (2.3 mL, 47.4 mmol) at 0 0C and the mixture stirred at RT for 5 hours. The reaction mixture was then filtered through Celite and the filter cake washed with EtOAc. The filtrate was evaporated to dryness and the resulting residue to give the title compound as pale oil (2.57 g, 37 percent).NMR deltaH (300 MHz, CDCl3) 6.57 (apparent t, J = 2.7, IH), 7.04 (dd, J = 2.1, 9.1, IH), 7.12 (dd, J = 2.1, 9.1, IH), 7.20-7.25 (m, IH) and 8.25 (s, IH). |
With pyrrolidine; nickel; hydrazine; In tetrahydrofuran; methanol; sulfuric acid; at 20℃; for 5h; | To a solution of l-bromo-5-fluoro-2-methyl-3-nitro-benzene (7.49 g, 31.8 mmol) in dioxane (40 mL) were added DMF-DMA (21.0 mL, 158 mmol) and pyrrolidine (2.6 mL, 31.1 mmol). The reaction mixture was heated at 100 0C for 3 h. The mixture was cooled to RT and concetrated in vacuo to give l-[2-(2-bromo-4-fluoro-6-nitro-phenyl)-l -methyl vinyl]- pyrrolidine as a dark red residue. To a suspension of the pyrrolidine (10.0 g, 31.7 mmol) and Raney.(R).-Nickel (suspension in H2O, 15 mL) in MeOHrTHF (1:1, 150 mL) was added hydrazine monohydrate (2.3 mL, 47.4 mmol) at 0 0C and the mixture stirred at RT for 5 hours. The reaction mixture was then filtered through Celite and the filter cake washed with EtOAc. The filtrate was concentrated in vacuo and the resulting residue was purified by column chromatography (silica gel, pentane:EtOAc 75:25) to provide the title compound as a pale oil (2.57 g, 37 percent). NMR deltaH (300 MHz, CDCl3) 6.57 (apparent t, J = 2.7, IH), 7.04 (dd, J = 2.1, 9.1, IH), 7.12 (dd, J = 2.1, 9.1, IH), 7.20-7.25 (m, IH) and 8.25 (s, IH). |
With pyrrolidine; nickel; hydrazine; In water; at 20℃; for 5h; | To a solution of l-bromo-5-fluoro-2-methyl-3-nitro-benzene (7.49 g, 31.8 mmol) in dioxane (40 mL) were added DMF-DMA (21.0 mL, 158 mmol) and pyrrolidine (2.6 mL, 31.1 mmol). The reaction mixture was heated at 100 °C for 3 h. The mixture was cooled to RT and concetrated in vacuo to give l-[2-(2-bromo-4-fluoro-6-nitro-phenyl)-l -methyl vinyl]- pyrrolidine as a dark red residue. To a suspension of the pyrrolidine (10.0 g, 31.7 mmol) and Raney.(R).-Nickel (suspension in H20, 15 mL) in MeOH:THF (1:1, 150 mL) was added hydrazine monohydrate (2.3 mL, 47.4 mmol) at 0 °C and the mixture stirred at RT for 5 hours. The reaction mixture was then filtered through Celite and the filter cake washed with EtOAc. The filtrate was concentrated in vacuo and the resulting residue was purified by <n="56"/>column chromatography (silica gel, pentane:EtOAc 75:25) to provide the title compound as a pale oil (2.57 g, 37 percent).NMR deltaH (300 MHz, CDCl3) 6.57 (apparent t, J = 2.7, IH), 7.04 (dd, J = 2.1, 9.1, IH), 7.12 (dd, J = 2.1, 9.1, IH), 7.20-7.25 (m, IH) and 8.25 (s, IH). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With oxygen; triethylamine;copper diacetate; In dichloromethane; at 20℃; for 16h; | Description 19. 4-bromo-6-fluoro-1-{4-[(phenylmethyl)oxy]phenyl}-1H-indole A mixture of 4-bromo-6-fluoro-1 H-indole (D16),(200 mg, 0.935 mmol), 4- benzyloxyphenylboronic acid (426 mg, 1.87 mmol), copper (II) acetate (332 mg, 1.87 mmol) and triethylamine (0.26 ml_, 188 mg, 1.87 mmol) in dichloromethane (5 ml.) was stirred in air at room temperature for 16 hours. The mixture was filtered through celite, concentrated and purified by chromatography on silica gel (elution with 0-20percent ethyl acetate in hexanes) to give the tite compound as a pink solid (D19), (205 mg). LC-MS: MH+ = 396/398 (C21H15BrFNO = 395/397) |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With oxygen; triethylamine;copper diacetate; In dichloromethane; at 20℃; for 72h;Molecular sieve; | Description 17. 4-Bromo-6-fluoro-1-{3-fluoro-4-[(phenylmethyl)oxy]phenyl}-1H- indole (D17) <n="24"/> To a solution of 4-bromo-6-fluoro-1 /-/-indole (D16) (580 mg, 2.71 mmol) in dichloromethane (20 mL) was added {3-fluoro-4-[(phenylmethyl)oxy]phenyl}boronic acid (1.33 g, 5.42 mmol), copper (II) acetate (984 mg, 5.42 mmol), triethylamine (0.755 mL, 5.42 mmol) and powdered 4A molecular sieves (2 g, 2.71 mmol). The mixture was stirred at room temperature in the presence of air for 3 days. The reaction was filtered through a pad of celite and washed with dichloromethane. The organic solution was washed with water and then the aqueous phase re-extracted with dichloromethane. The combined organic phases were dried over magnesium sulphate, filtered and concentrated. The product was partially purified by silica gel chromatography eluting with 5-20percent ethyl acetate in hexane to yield the title compound (D17), (980 mg). LC-MS: MH+ = 414, 415 (C2iH14BrF2NO = 413, 415) |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Description 16. 4-Bromo-6-fluoro-1H-indole (D16) To a solution of crude[(E)-2-(2-bromo-4-fluoro-6-nitrophenyl)ethenyl]dimethylamine (D15) (6.07 g, 21.0 mmol) in acetic acid (200 ml.) and water (50.0 ml.) at 750C was added zinc powder (15.11 g, 231 mmol) portionwise over 1 hour. The mixture was heated to 850C and stirred for 4 hours. After cooling to room temperature, the reaction mixture was neutralised by the addition of 50percent aqueous sodium hydroxide solution. The product was extracted into diethyl ether. After separation of the layers, the aqueous phase was re-extracted with diethyl ether. The combined organic layers were dried over magnesium sulphate, filtered and concentrated. The product was partially purified by silica gel chromatography eluting with 5-30percent ethyl acetate in hexane. Purer fractions were combined to give the title compound (D16), (580 mg). LC-MS: [M-H]" = 212, 214 (C8H5BrFN = 213, 215) |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
To a mixture of 4-bromo-6-fluoro-1 H-indole (2 g) in DMF (5 ml) was added sodium hydride (60 percent in mineral oil) (0.448 g). The reaction was stirred at 20 °C for 10 min. 4- Nitrobenzenesulfonyl chloride (2.278 g) was added and the reaction was stirred at 20 °C for 1 h. The mixture was poured onto water (100 ml), and extracted with DCM (50 ml) which was separated by hydrophobic frit. Purification by silica (2 x 100 g) on Flashmaster II using a gradient of DCM and cyclohexane gave the title compound as a pale yellow solid, 1.54g.LCMS (Method B); Rt = 1.39 min. | ||
With sodium hydride; In N,N-dimethyl-formamide; mineral oil; at 20℃; for 0.166667h; | To a mixture of 4-bromo-6-fluoro-1 H-indole (2 g) in DMF (5 ml) was added sodium hydride (60percent in mineral oil) (0.448 g). The reaction was stirred at RT for 10 min. 4- Nitrobenzenesulfonyl chloride (2.278 g) was added and the reaction was stirred at RT for 1 h. The mixture was poured onto water (100 ml), and extracted with DCM (50 ml) which was separated by hydrophobic frit. Purification by silica (2 x 100 g) on Flashmaster II using a gradient of DCM and cyclohexane gave the title compound as a pale yellow solid, 1 .54 g.LCMS (Method B); Rt = 1 .39 min, MH+ = 400. | |
1.54 g | 4-Bromo-6-fluoro-1-[(4-nitrophenyl)sulfonyl]-1H-indole To a mixture of <strong>[885520-70-7]4-bromo-6-fluoro-1H-indole</strong> (2 g) in DMF (5 ml) was added sodium hydride (60percent in mineral oil) (0.448 g). The reaction was stirred at 20° C. for 10 min. 4-Nitrobenzenesulfonyl chloride (2.278 g) was added and the reaction was stirred at 20° C. for 1 h. The mixture was poured onto water (100 ml), and extracted with DCM (50 ml) which was separated by hydrophobic frit. Purification by silica (2*100 g) on Flashmaster II using a gradient of DCM and cyclohexane gave the title compound as a pale yellow solid, 1.54 g. LCMS (Method E); R=1 .39 mm. |
Intermediate 111 4-Bromo-6-fluoro-1 -[(4-nitrophenyl)sulfonyl]-1 H-indole <n="142"/> Sodium hydride (299 mg, 7.48 mmol) was added to a stirred solution of 4-bromo-6-fluoro- 1H-indole (800 mg, 3.74 mmol) in DMF (20 ml) that had been cooled in an ice bath to 0 0C and placed under nitrogen. The mixture was stirred for 5 mins before 4- nitrobenzenesulfonyl chloride (911 mg, 4.1 1 mmol) was added. The mixture was stirred at 0 0C for 1 hour. The resultant orange/brown solution was poured into stirring water (40 ml). The mixture was rapidly stirred for 30 mins. The resulting brown suspension was collected by filtration, washed with water and dried in a vacuum oven at 5O0C overnight to give a pale brown solid, which was purified by Flashmaster II, on a silica cartridge (100g) using a gradient of ethylacetate and cyclohexane to afford the title compound as a white solid. LCMS (Method C): R1 = 3.61 mins, MH+ = 400. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With potassium phosphate;chloro(di-2-norbornylphosphino)(2'-dimethylamino-1,1'-biphenyl-2-yl)palladium(II); In 1,4-dioxane; water; at 120℃; for 0.166667h;Microwave irradiation; | Example 129N-[6-(6-Fluoro-1 H-indol-4-yl)-1 H-indazol-4-yl]-1 -(1 -methylethyl)-1 H-pyrazole-5- carboxamide A microwave vial was charged with Solvias catalyst (8mg), tripotassium phosphate (90mg) and 4-bromo-6-fluoro-1 H-indole (available from Sinova, 33mg). 1 -(1 -Methylethyl)- N-[2-(tetrahydro-2H-pyran-2-yl)-6-(4,4,6,6-tetramethyl-1 ,3,2-dioxaborinan-2-yl)-2H- indazol-4-yl]-1 H-pyrazole-5-carboxamide (70mg) in 1 ,4-dioxane (0.5ml) was added followed by water (0.1 ml). The mixture was heated under microwave irradiation at 1200C for 10min. The mixture was passed through a silica cartridge which had been preconditioned with methanol, washed through with methanol, then dried under a stream of nitrogen. The residue was subjected to a DCM/water wash and then dried under a stream of nitrogen. The residue was dissolved in DMSO:methanol (1 ml, 1 :1 , v/v) and purified by MDAP (method A). Appropriate fractions were evaporated under a stream of nitrogen. The residues were dissolved in a minimum amount of methanol, a few drops of 2M HCI (aq) were added and the reactions were left to stand briefly at room temperature. The reactions were combined then passed through an aminopropyl cartridge preconditioned with methanol and dried. Purification was carried out using the following system: Column: Supelco ABZ+ Plus, 5 mum, 100x21.2mm i.d. Solvent A: 0.1percent formic acid in water <n="205"/>Solvent B: 1 percent formic acid in watepiacetonitrile (5:95, v/v) Flow rate: 20 ml/min. Gradient: 35 - 70percent B over 12min.The appropriate fraction was dried under a stream of nitrogen to give title compound, 7mg.LC/MS (method B) LOOmin m/z 404 [MH+]. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With potassium phosphate;chloro(di-2-norbornylphosphino)(2'-dimethylamino-1,1'-biphenyl-2-yl)palladium(II); In 1,4-dioxane; water; at 120℃; for 0.416667h;Microwave irradiation; | Example 89N-[6-(6-Fluoro-1 H-indol-4-yl)-1 H-indazol-4-yl]-2-methyl-1 ,3-thiazole-4-carboxamide A microwave vial was charged with Solvias catalyst (15mg), tripotassium phosphate (116mg), 4-bromo-6-fluoro-1 H-indole (available from Sinova, 32mg), 1-(1-methylethyl)-N- [2-(tetrahydro-2H-pyran-2-yl)-6-(4,4,6,6-tetramethyl-1 ,3,2-dioxaborinan-2-yl)-2H-indazol-4- yl]-1 H-pyrazole-5-carboxamide (66mg), 1 ,4-dioxane (0.5ml) and water (0.1 ml). The reaction mixture was heated under microwave irradiation for a total of 25min at 1200C. The mixture was passed through a silica cartridge pre-conditioned with methanol, washing with methanol, then dried. The residue was separated between DCM and water and the organic layer was passed through a hydrophobic frit and dried. The residue was dissolved in DMSO:methanol (1 ml, 1 :1 , v/v) and purified by MDAP (Method H). Appropriate fractions were dried, redissolved in methanol and a few drops of 2M HCI (aq) were added. The reaction was left to stir for 30min. The reaction was passed through an aminopropyl cartridge, preconditioned with methanol, washing with methanol, then dried under a stream of nitrogen to give title compound, 11 mg. LC/MS (Method D) LOOmin m/z 392 [MH+]. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
68% | With 1,1'-bis-(diphenylphosphino)ferrocene; tris-(dibenzylideneacetone)dipalladium(0); zinc; In 1-methyl-pyrrolidin-2-one; at 140℃; for 18h;Inert atmosphere; | step 2: To a solution of 224 (1.16 g, 5.42 mmol) in NMP (8.5 mL) under argon atmosphere was added Zn(CN)2 (634 mg, 5.42 mmol), zinc powder (70 mg, 1.1 mmol), Pd2(dba)3 (743 mg, 0.81 mmol) and dppf (900 mg, 1.62 mmol). The reaction was stirred at 140 °C for 18 h, cooled and partitioned between EtOAc (200 mL) and H20 (50 mL). The organic layer was separated, washed with brine, dried (MgSO i), filtered and concentrated to dryness in vacuo. The residue was purified by S1O2 chromatography eluting with 15percent EtO Ac/petroleum ether to afford 588 mg (68percent) of 6-fluoro- lH-indole-4-carbonitrile (226) as yellow solid (588 mg, 68percent): MS (ESI) m/z = 161.1 [M+l] +. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
30 mg | A mixture of 4-bromo-6-fluoro-1 H-indole (32 mg, 0.149 mmol), £>/s(pinacolato)diboron (79 mg, 0.309 mmol), KOAc (36 mg, 0.371 mmol) and PdCI2(dppf) (20 mg, 0.025 mmol) in dioxane (1.3 mL) was heated in a sealed tube at 100°C for 3 h. On cooling, intermediate 2-XI (50 mg, 0.124 mmol), Pd(PPh3)4 (14 mg, 0.012 mmol) and Na2C03 2M (0.25 mL) were added. The reaction mixture was heated at 100°C for 20h. On cooling, the mixture was purified by flash column chromatography (5percent to 20percent EtOAc in DCM) and triturated with Et20 to give final compound 33 as a white solid (30 mg). LC-MS1 , tR= 4.95 min, MS: 503.2 [M+H]+ 1 H NMR (300 MHz, DMSO) delta 1 1.32 (s, 1 H), 7.74 (d, J = 1 1.4 Hz, 1 H), 7.45 (s, 1 H), 7.30 (d, J = 9.4 Hz, 1 H), 7.23 (s, 1 H), 4.26 (s, 2H), 4.05-3.71 (m, 8H), 3.52 (m, 1 H), 3.56-3.09 (m, 4H), 2.86 (s, 3H), 2.27-1.96 (m, 4H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
12 mg | A mixture of <strong>[885520-70-7]4-bromo-6-fluoro-1H-indole</strong> (36 mg, 0.168 mmol), bis(pinacolato)diboron (90 mg, 0.350 mmol), potassium acetate (41 mg, 0.420 mmol) and PdCI2(dppf) (23 mg, 0.028 mmol) in dioxane (1 mL) was heated in a sealed tube at 100°C for 3 h. On cooling, intermediate XL (40 mg, 0.140 mmol) in dioxane (1 mL), tetrakis(triphenylphosphine)palladium(0) (16 mg, 0.014 mmol) and Na2C032M (0.21 mL) were added. The reaction mixture was heated at 100°C for 19h. On cooling, the mixture was purified by flash column chromatography, first (5percent to 10percent EtOAc in DCM) and second by prep-HPLC to give the final product Example 45 as a white solid (12 mg). LC-MS1 , tR= 4.04 min. MS: 385.2 [M+H]+ 1 H NMR (300 MHz, DMSO) delta 1 1.30 (s, 1 H), 7.79 (d, J = 1 1.4 Hz, 1 H), 7.44 (s, 1 H), 7.26 (d, J = 15.4 Hz, 2H), 5.34 (s, 1 H), 4.47 (dd, J = 27.0, 10.9 Hz, 2H), 4.05 (d, J = 8.2 Hz, 1 H), 3.93 (t, J = 10.1 Hz, 2H), 3.72 (s, 1 H), 3.58 (s, 1 H), 3.20 (dd, J = 24.7, 13.8 Hz, 3H), 1.52 (s, 7H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
35% | With cerium(III) chloride; 1-hydroxy-3H-benz[d][1,2]iodoxole-1,3-dione; In water; acetonitrile; at 85℃; for 4h; | An acetonitrile/water (9:1) suspension (500 ml) of <strong>[885520-70-7]4-bromo-6-fluoro-1H-indole</strong> (5.0 g, 23.4 mmol), cerium chloride (1.1 g, 0.23 mmol) and 2-iodoxybenzoic acid (16.4 g, 58.5 mmol) was stirred at 85° C. for 4 hours. To the reaction mixture, ethyl acetate and water were added for extraction and the organic layer was dried, then concentrated under reduced pressure. The resulting residue was purified by neutral, OH-form silica gel column chromatography (hexane/ethyl acetate). The titled compound was obtained as a brown solid in an amount of 2.0 g (yield: 35percent). (ESI neg.) m/z: 242 (M-H)- |
Tags: 885520-70-7 synthesis path| 885520-70-7 SDS| 885520-70-7 COA| 885520-70-7 purity| 885520-70-7 application| 885520-70-7 NMR| 885520-70-7 COA| 885520-70-7 structure
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P411 + P235 | Keep cool. |
Disposal | |
Code | Phrase |
P501 | Dispose of contents/container to ... |
P502 | Refer to manufacturer/supplier for information on recovery/recycling |
Physical hazards | |
Code | Phrase |
H200 | Unstable explosive |
H201 | Explosive; mass explosion hazard |
H202 | Explosive; severe projection hazard |
H203 | Explosive; fire, blast or projection hazard |
H204 | Fire or projection hazard |
H205 | May mass explode in fire |
H220 | Extremely flammable gas |
H221 | Flammable gas |
H222 | Extremely flammable aerosol |
H223 | Flammable aerosol |
H224 | Extremely flammable liquid and vapour |
H225 | Highly flammable liquid and vapour |
H226 | Flammable liquid and vapour |
H227 | Combustible liquid |
H228 | Flammable solid |
H229 | Pressurized container: may burst if heated |
H230 | May react explosively even in the absence of air |
H231 | May react explosively even in the absence of air at elevated pressure and/or temperature |
H240 | Heating may cause an explosion |
H241 | Heating may cause a fire or explosion |
H242 | Heating may cause a fire |
H250 | Catches fire spontaneously if exposed to air |
H251 | Self-heating; may catch fire |
H252 | Self-heating in large quantities; may catch fire |
H260 | In contact with water releases flammable gases which may ignite spontaneously |
H261 | In contact with water releases flammable gas |
H270 | May cause or intensify fire; oxidizer |
H271 | May cause fire or explosion; strong oxidizer |
H272 | May intensify fire; oxidizer |
H280 | Contains gas under pressure; may explode if heated |
H281 | Contains refrigerated gas; may cause cryogenic burns or injury |
H290 | May be corrosive to metals |
Health hazards | |
Code | Phrase |
H300 | Fatal if swallowed |
H301 | Toxic if swallowed |
H302 | Harmful if swallowed |
H303 | May be harmful if swallowed |
H304 | May be fatal if swallowed and enters airways |
H305 | May be harmful if swallowed and enters airways |
H310 | Fatal in contact with skin |
H311 | Toxic in contact with skin |
H312 | Harmful in contact with skin |
H313 | May be harmful in contact with skin |
H314 | Causes severe skin burns and eye damage |
H315 | Causes skin irritation |
H316 | Causes mild skin irritation |
H317 | May cause an allergic skin reaction |
H318 | Causes serious eye damage |
H319 | Causes serious eye irritation |
H320 | Causes eye irritation |
H330 | Fatal if inhaled |
H331 | Toxic if inhaled |
H332 | Harmful if inhaled |
H333 | May be harmful if inhaled |
H334 | May cause allergy or asthma symptoms or breathing difficulties if inhaled |
H335 | May cause respiratory irritation |
H336 | May cause drowsiness or dizziness |
H340 | May cause genetic defects |
H341 | Suspected of causing genetic defects |
H350 | May cause cancer |
H351 | Suspected of causing cancer |
H360 | May damage fertility or the unborn child |
H361 | Suspected of damaging fertility or the unborn child |
H361d | Suspected of damaging the unborn child |
H362 | May cause harm to breast-fed children |
H370 | Causes damage to organs |
H371 | May cause damage to organs |
H372 | Causes damage to organs through prolonged or repeated exposure |
H373 | May cause damage to organs through prolonged or repeated exposure |
Environmental hazards | |
Code | Phrase |
H400 | Very toxic to aquatic life |
H401 | Toxic to aquatic life |
H402 | Harmful to aquatic life |
H410 | Very toxic to aquatic life with long-lasting effects |
H411 | Toxic to aquatic life with long-lasting effects |
H412 | Harmful to aquatic life with long-lasting effects |
H413 | May cause long-lasting harmful effects to aquatic life |
H420 | Harms public health and the environment by destroying ozone in the upper atmosphere |
Sorry,this product has been discontinued.
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