Structure of 6397-33-7
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The BI-3802 was designed by Boehringer Ingelheim and could be obtained free of charge through the Boehringer Ingelheim open innovation portal opnMe.com, associated with its negative control.
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CAS No. : | 6397-33-7 |
Formula : | C9H13NS |
M.W : | 167.27 |
SMILES Code : | NC1=CC=CC=C1SC(C)C |
MDL No. : | MFCD08691961 |
InChI Key : | BZPPEJDGWPFYAL-UHFFFAOYSA-N |
Pubchem ID : | 13852720 |
GHS Pictogram: |
![]() |
Signal Word: | Warning |
Hazard Statements: | H302 |
Precautionary Statements: | P280-P305+P351+P338 |
Num. heavy atoms | 11 |
Num. arom. heavy atoms | 6 |
Fraction Csp3 | 0.33 |
Num. rotatable bonds | 2 |
Num. H-bond acceptors | 0.0 |
Num. H-bond donors | 1.0 |
Molar Refractivity | 52.18 |
TPSA ? Topological Polar Surface Area: Calculated from |
51.32 Ų |
Log Po/w (iLOGP)? iLOGP: in-house physics-based method implemented from |
2.17 |
Log Po/w (XLOGP3)? XLOGP3: Atomistic and knowledge-based method calculated by |
2.0 |
Log Po/w (WLOGP)? WLOGP: Atomistic method implemented from |
2.78 |
Log Po/w (MLOGP)? MLOGP: Topological method implemented from |
2.72 |
Log Po/w (SILICOS-IT)? SILICOS-IT: Hybrid fragmental/topological method calculated by |
2.15 |
Consensus Log Po/w? Consensus Log Po/w: Average of all five predictions |
2.37 |
Log S (ESOL):? ESOL: Topological method implemented from |
-2.41 |
Solubility | 0.653 mg/ml ; 0.0039 mol/l |
Class? Solubility class: Log S scale |
Soluble |
Log S (Ali)? Ali: Topological method implemented from |
-2.7 |
Solubility | 0.33 mg/ml ; 0.00198 mol/l |
Class? Solubility class: Log S scale |
Soluble |
Log S (SILICOS-IT)? SILICOS-IT: Fragmental method calculated by |
-2.96 |
Solubility | 0.182 mg/ml ; 0.00109 mol/l |
Class? Solubility class: Log S scale |
Soluble |
GI absorption? Gatrointestinal absorption: according to the white of the BOILED-Egg |
High |
BBB permeant? BBB permeation: according to the yolk of the BOILED-Egg |
Yes |
P-gp substrate? P-glycoprotein substrate: SVM model built on 1033 molecules (training set) |
No |
CYP1A2 inhibitor? Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set) |
Yes |
CYP2C19 inhibitor? Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set) |
No |
CYP2C9 inhibitor? Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set) |
No |
CYP2D6 inhibitor? Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set) |
No |
CYP3A4 inhibitor? Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set) |
No |
Log Kp (skin permeation)? Skin permeation: QSPR model implemented from |
-5.9 cm/s |
Lipinski? Lipinski (Pfizer) filter: implemented from |
0.0 |
Ghose? Ghose filter: implemented from |
None |
Veber? Veber (GSK) filter: implemented from |
0.0 |
Egan? Egan (Pharmacia) filter: implemented from |
0.0 |
Muegge? Muegge (Bayer) filter: implemented from |
1.0 |
Bioavailability Score? Abbott Bioavailability Score: Probability of F > 10% in rat |
0.55 |
PAINS? Pan Assay Interference Structures: implemented from |
0.0 alert |
Brenk? Structural Alert: implemented from |
1.0 alert: heavy_metal |
Leadlikeness? Leadlikeness: implemented from |
No; 1 violation:MW<1.0 |
Synthetic accessibility? Synthetic accessibility score: from 1 (very easy) to 10 (very difficult) |
1.68 |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With potassium tert-butylate; In ethanol; at 0 - 20℃; for 4h;Inert atmosphere; | 6. Preparation of 2- (isopropylthio) aniline (Compound 9) Under the protection of nitrogen, compound 2-amino-thiophenol (12.52 g, 0.1 mol), 2-iodopropane (18.71 g, 0.11 mol) and ethanol (130 mL) was successively added to a flask. Under stirring, potassium tert-butoxide (14.61 g, 0.13 mol) was slowly added under 0 C. The reaction was warmed to room temperature and conducted for 4 hours, and the reaction was monitored as being substantially completed by HPLC. The reaction mixture was filtered through Celite, the filter cake was washed with ethanol and the combined filtrate was concentrated in vacuo by rotary evaporator. The residue was dissolved in ethyl acetate (200mL), washed with water and brine successively. It was dried over anhydrous sodium sulfate, filtered and concentrated by a rotary evaporator under vacuo to give a crude product. The crude product was purified by silica gel column chromatography to give the desired product as yellowish oil. MS Calcd.: 167; MS Found: 168(M+H) +. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
99% | Only 0.2% of 2-aminophenylisopropylsulfane (formed by dehalogenation) was found as an impurity. Pure, colorless 2-amino-6-chlorophenyl-isopropylsulfane with a content of more than 99% was obtained by distillation at a boiling point of 144 C. at 11 mbar. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With hydrogenchloride; sulfur dioxide; ammonia; In tetrahydrofuran; water; acetic acid; | EXAMPLE 2 2-(1-Methylethylthio)benzenesulfonamide To a solution of 2-(1-methylethylthio)benzenamine (200 g, 1.20 mol) in a mixture of concentrated hydrochloric acid (420 ml) and glacial acetic acid (120 ml) was added a solution of sodium nitrile (91.2 g, 1.32 mol) in water (180 ml) at -5 to 0. The solution was stirred at 0 for 1/2 hour and then poured, in several portions, into a mixture of cupric chloride dihydrate (24 g) and liquid sulfur dioxide (370 ml, 8.28 mol), in glacial acetic acid (1200 ml) at 0. The resulting solution was stirred at 0 for one hour and then allowed to warm to room temperature. After several hours, ether (1000 ml) was added, and the reaction mixture was stirred overnight and then poured into ice-water. The resulting oil was extracted into dichloromethane. The organic extracts were washed with water and 5% aqueous sodium bicarbonate (until neutral), dried (MgSO4) and concentrated in vacuo to give an oil. The crude sulfonyl chloride was dissolved in dry THF (2000 ml) and treated with anhydrous liquid ammonia (50 ml, 2.3 mol) at 0. The solution was stirred at 0 for one hour, allowed to warm to room temperature, and stirred an additional 2.5 hours. The reaction mixture was concentrated in vacuo, and the residue was diluted with water (1000 ml) and extracted with dichloromethane. The extracts were washed with water, dried (MgSO4) and concentrated to yield the crude product. The oil was dissolved in hot (60) hexane/n-butyl chloride (5/2). Upon cooling, 2-(1-methylethylthio)benzenesulfonamide settled out as a dark oil. NMR (CDCl3)delta: 1.30 (d, --CH3); 3.60 (hept. --CH--); 5.75 (broad s, --NH2); 7.0-8.2 (m, Ar--H). IR (Nujol): 3200-3300 doublet); 1300 and 1150 cm-1. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With sodium hydroxide; In ethanol; | EXAMPLE 1 2-(1-Methylethylthio)benzenamine To a solution of 2-aminothiophenol (90%, 100 g, 0.72 mol) and sodium hydroxide (31.7 g, 0.792 mol) in 90% aqueous ethanol (500 ml) was added dropwise 2-bromopropane (89 g, 0.72 mol) at room temperature. When the addition was complete, the reaction mixture was refluxed for 3 hours, cooled to room temperature, and then concentrated in vacuo. The residue was diluted with water (300 ml) and extracted with ether (3*500 ml). The ether extracts were washed with water and brine, dried with MgSO4 and concentrated in vacuo to yield the crude product. Distillation through a Vigreaux column gave 2-(1-methylethylthio)benzenamine: bp 94 (2.2-2.4 mm). NMR (CDCl3)delta: 1.25 (d, 6H, --CH3), 3.15 (hept., 1H, --CH--); 4.25 (broad s, 2H, --NH2); 6.40-7.40 (m, 4H, Ar--H). | |
With triethylamine; In acetonitrile; at 25℃; for 6h;Reflux; | A solution of 2-aminothiophenol (125 g), acetonitrile (4 L), triethylamine (242.4 g) at 25 C was added bromoisopropane (123 g), and the mixture was refluxed at reflux for 6 hours. Cooling to room temperature, Dropping 2,4,5-trichloropyrimidine (180g), heated to reflux for 12h, The reaction is complete, cool down to 25 C, Add sodium phosphotungstic acid (4g), add 30% hydrogen peroxide (700ml), the temperature to 60 C, the reaction 2 hours, the reaction is completed, Add 10L of water, precipitation of solid, filtration, water and ethanol mixture (1/1) leaching, drying product 302g, purity 98.9%, yield: 87.2%. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Example 12 4-Chloro-3-trifluoromethyl-2--isopropylthiobenzensulfonanilide (Compound No. 66) The procedure of Example 10 was repeated using 16.7 g of <strong>[6397-33-7]2-isopropylthioaniline</strong> and 27.9 g of 4-chloro-3-trifluoromethylbenzenesulfonyl chloride to yield 37.7 g of the title compound as a brown oil. Purification by silicagel-colum chromatography gave a colorless oil, n [23/D ] =1.5518. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
1.30 g | N-(2-(isopropylthio)phenyl)-3-methyl-6-(methylthio)-1H-pyrazolo[3,4-d]pyrimidin-4-amine (A-5) A mixture of 4-chloro-3-methyl-6-methylmercaptopyrazolo[3,4-d]pyrimidine (A-3) (1.21 g, 5.63 mmol) and <strong>[6397-33-7]2-(isopropylthio)aniline</strong> (A-4) (1.42 g, 8.50 mmol) in isopropanol (56 mL) was stirred at reflux for 3 h. After cooling down to ambient temperature, TEA (0.78 mL, 5.66 mmol) was added to the mixture, and the solution was again heated to reflux for 0.5 h. After cooling down to ambient temperature, the mixture was filtered to give the title compound (A-5) as white solid (1.30 g, 3.77 mmol). MS-ESI (m/z): 346 (M+H)+. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With dmap; In acetonitrile; at 20℃; for 12h; | 2,5-dichloro-N-(2-(isopropylsulfonyl)phenyl)pyrimidin-4-amine (B) To a mixture of <strong>[6397-33-7]2-(isopropylthio)aniline</strong> (23 g, 0.14 mol) in acetonitrile (250 mL) at RT was added DMAP (8.5 g, 70 mmol) and (Boc)2O (150 g, 688 mmol). After stirred at ambient temperature for 12 h, the solution was concentrated. The residue was purified by column chromatography on silica gel eluting with hexanes/EtOAc (10:1) to give the title compound (B-1). To a mixture of (B-1) (54 g, 0.14 mol) in DCM (500 mL) at 0 C. was added m-CPBA (101 g. 0.44 mol). After stirred at ambient temperature for 12 h, the solution was washed with saturated NaHSO3, brine, dried with Na2SO4 and concentrated to give the compound (B-2) as a solid. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
86% | With N-ethyl-N,N-diisopropylamine; In isopropyl alcohol; for 30h;Reflux; | The aniline VII (30.11 g, 0.18 mol) was dissolved in propan-2-ol (300 ml), trichloropyrimidine of formula III (36.32 g, 1.1 eq.) and diisopropylethylamine (40.7 ml; 1.3 eq) were added and the mixture was heated up to reflux for 30 h. The course of the reaction was monitored by means of RPLC. Subsequently, 150 ml of the solvent was removed from the reaction by distillation, the mixture was cooled down to 10C and was left tocrystallize for 8 h under stirring. The separated crystals were aspirated, washed with 2 x 100ml of propan-2-ol and dried until constant weight was achieved. The amount of 48.76 g(86 %) of the sulphide of formula VIII with the HPLC purity of> 99 % was obtained.1H NMR (500 MHz, CDC13), a (ppm): 9.29 (bs, 1H), 8.66 (d, J=7.8 Hz, 1H), 8.23 (s, 1H),7.59 (dd, J=7.7, 1.4 Hz), 7.46 (m, 1H), 7.1 (m, 1H), 3.15 (sp, J=6.7), 1.27 (d, 1H). 13CNMR(500MHz, CDC13): 158.0, 155.9, 154.5, 139.7, 137.1, 130.4, 124.0, 122.9, 119.7, 114.8,40.7, 23.2 |
83% | With potassium carbonate; In N,N-dimethyl-formamide; at 110℃;Inert atmosphere; | Weigh 12.8 g of 2,4,5-trichloropyrimidine (70 mmol)And 5.85 g of 2-isopropyl decyl aniline (35 mmol),Put into a 250mL three-necked flask,Add 50 mL of N,N-dimethylformamide (DMF) to dissolve.Under nitrogen protection,The temperature rose to 110 C,9.6 g of anhydrous potassium carbonate (70 mmol) was added in portions.Overnight reaction at 110 C,TLC monitoring process.After the reaction, add water,Extracted with 150 mL of ethyl acetate 3 times.Combine the organic layers,Dry over anhydrous sodium sulfate,Filter and concentrate,Purified by silica gel column,The elution system is ethyl acetate:Petroleum ether (V/V = 1:10),Obtained 18.4 g of light yellow solid2,5-dichloro--N4- (2- isopropyl-mercapto-phenyl) - pyrimidin-4-amine,The yield was 83%. |
With potassium tert-butylate; In water; | 7. Preparation of 2,5-dichloro -N- (2- (isopropylthio) phenyl) pyrimidin- 4-amine (Compound 10) Under the protection of nitrogen, 2- (isopropylthio) aniline (0.50 g, 3.0 mmol), 2,4,5-trichloropyrimidine (0.37 g, 2.0 mmol) and anhydrous N,N-dimethyl formamide (12 mL) were successively added to a flask. Under stirring, potassium tert-butoxide (0.67 g, 6.0 mol) was slowly added at 0 C. The reaction was warmed to room temperature for 2 hrs. The reaction mixture was added into pure water (100mL) to quench the reaction. Then it was extracted with ethyl acetate for three times. The organic layers were combined, and washed with water and brine successively. It was dried over anhydrous sodium sulfate, filtered and concentrated by a rotary evaporator under vacuo to give a crude product. The crude product was purified by silica gel column chromatography to give the desired product as white soild. MS Calcd.: 314; MS Found: 315 (M+H)+, 337 (M+Na)+. |
2.65 kg | With N-ethyl-N,N-diisopropylamine; In isopropyl alcohol;Reflux; Large scale; | 1.9kg crude previous step, 1.9kg2,4,5- trichloropyrimidine, 2.4kg diisopropylethyl amine 20kg of isopropanol was added, the reaction warmed to reflux.End of the reaction was monitored by HPLC, to the raw material 2-isopropyl-aniline sulfide content of less than 6%.Cooling to 40 ~ 55 dry reaction mixture was concentrated under reduced pressure, ethyl acetate was added 20kg entrained again.Ethyl acetate was added 20kg, 20kg purified water twice.Ethyl acetate phase was concentrated to dryness under reduced pressure, a dark oil was added to 10kg of anhydrous ethanol, 20 ~ 25 4 hours to crystallize with stirring, 0 ~ 5 crystallize with stirring and 16 hours.Filtered, 1kg ethanol washing once.40 powder dried in vacuo to give a white solid 2.65kg. |
for 12h;Reflux; | A solution of 2-aminothiophenol (125 g), acetonitrile (4 L), triethylamine (242.4 g) at 25 C was added bromoisopropane (123 g), and the mixture was refluxed at reflux for 6 hours. Cooling to room temperature, Dropping 2,4,5-trichloropyrimidine (180g), heated to reflux for 12h, The reaction is complete, cool down to 25 C, Add sodium phosphotungstic acid (4g), add 30% hydrogen peroxide (700ml), the temperature to 60 C, the reaction 2 hours, the reaction is completed, Add 10L of water, precipitation of solid, filtration, water and ethanol mixture (1/1) leaching, drying product 302g, purity 98.9%, yield: 87.2%. |
A514494 [861343-73-9]
2-(Isopropylthio)aniline hydrochloride
Reason: Free-salt