Structure of 63485-50-7
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The BI-3802 was designed by Boehringer Ingelheim and could be obtained free of charge through the Boehringer Ingelheim open innovation portal opnMe.com, associated with its negative control.
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CAS No. : | 63485-50-7 |
Formula : | C6H10O3 |
M.W : | 130.14 |
SMILES Code : | O=C([C@H]1C[C@@H](O)C1)OC |
MDL No. : | MFCD18483124 |
InChI Key : | BYKHAEUVLSBWSU-UHFFFAOYSA-N |
Pubchem ID : | 12815112 |
GHS Pictogram: |
![]() |
Signal Word: | Warning |
Hazard Statements: | H302 |
Precautionary Statements: | P280-P305+P351+P338 |
Num. heavy atoms | 9 |
Num. arom. heavy atoms | 0 |
Fraction Csp3 | 0.83 |
Num. rotatable bonds | 2 |
Num. H-bond acceptors | 3.0 |
Num. H-bond donors | 1.0 |
Molar Refractivity | 31.29 |
TPSA ? Topological Polar Surface Area: Calculated from |
46.53 Ų |
Log Po/w (iLOGP)? iLOGP: in-house physics-based method implemented from |
1.71 |
Log Po/w (XLOGP3)? XLOGP3: Atomistic and knowledge-based method calculated by |
-0.05 |
Log Po/w (WLOGP)? WLOGP: Atomistic method implemented from |
-0.07 |
Log Po/w (MLOGP)? MLOGP: Topological method implemented from |
0.0 |
Log Po/w (SILICOS-IT)? SILICOS-IT: Hybrid fragmental/topological method calculated by |
0.33 |
Consensus Log Po/w? Consensus Log Po/w: Average of all five predictions |
0.38 |
Log S (ESOL):? ESOL: Topological method implemented from |
-0.48 |
Solubility | 42.8 mg/ml ; 0.329 mol/l |
Class? Solubility class: Log S scale |
Very soluble |
Log S (Ali)? Ali: Topological method implemented from |
-0.48 |
Solubility | 43.4 mg/ml ; 0.334 mol/l |
Class? Solubility class: Log S scale |
Very soluble |
Log S (SILICOS-IT)? SILICOS-IT: Fragmental method calculated by |
0.01 |
Solubility | 133.0 mg/ml ; 1.02 mol/l |
Class? Solubility class: Log S scale |
Soluble |
GI absorption? Gatrointestinal absorption: according to the white of the BOILED-Egg |
High |
BBB permeant? BBB permeation: according to the yolk of the BOILED-Egg |
No |
P-gp substrate? P-glycoprotein substrate: SVM model built on 1033 molecules (training set) |
No |
CYP1A2 inhibitor? Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set) |
No |
CYP2C19 inhibitor? Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set) |
No |
CYP2C9 inhibitor? Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set) |
No |
CYP2D6 inhibitor? Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set) |
No |
CYP3A4 inhibitor? Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set) |
No |
Log Kp (skin permeation)? Skin permeation: QSPR model implemented from |
-7.13 cm/s |
Lipinski? Lipinski (Pfizer) filter: implemented from |
0.0 |
Ghose? Ghose filter: implemented from |
None |
Veber? Veber (GSK) filter: implemented from |
0.0 |
Egan? Egan (Pharmacia) filter: implemented from |
0.0 |
Muegge? Muegge (Bayer) filter: implemented from |
1.0 |
Bioavailability Score? Abbott Bioavailability Score: Probability of F > 10% in rat |
0.55 |
PAINS? Pan Assay Interference Structures: implemented from |
0.0 alert |
Brenk? Structural Alert: implemented from |
0.0 alert: heavy_metal |
Leadlikeness? Leadlikeness: implemented from |
No; 1 violation:MW<1.0 |
Synthetic accessibility? Synthetic accessibility score: from 1 (very easy) to 10 (very difficult) |
2.51 |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
91% | With di-isopropyl azodicarboxylate; triphenylphosphine; In tetrahydrofuran; at 0 - 20℃; for 72h; | Triphenylphosphine (6.14 g, 23.4 mmol) was added to a solution of 2-methoxy-5- fluorophenol (2.25 g, 15.6 mmol) in tetrahydrofuran (40 mL). The reaction mixture was cooled to 0 C, and (c/s)-methyl 3-hydroxycyclobutanecarboxylate (2.44 g, 18.7 mmol) was added, followed by DIAD (4.6 mL, 23 mmol). The reaction mixture was then warmed to room temperature, stirred for 3 days, and diluted with water and EtOAc. The mixture was partitioned, and the aqueous layer was extracted with EtOAc. The organics were washed with water, dried over sodium sulfate, filtered, and concentrated. The residue was purified on silica gel eluting with a 30%-70% EtOAc-hexanes gradient to give the title compound as a colorless, thick oil (3.6 g, 91 %). 1H NMR (400 MHz, CD3SOCD3) delta 2.52-2.64 (m, 2 H), 2.74-2.83 (m, 2 H), 3.15- 3.27 (m, 1 H), 3.76 (s, 3 H), 3.86 (s, 3 H), 4.90 (t, J = 7 Hz, 1 H), 6.48 (dd, J = 10, 3 Hz, 1 H), 6.62 (td, J = 8, 3 Hz, 1 H), 6.81 (dd, J = 9, 5 Hz, 1 H); LC-MS (LC-ES) peak at T = 0.78 min. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
49% | With di-isopropyl azodicarboxylate; triphenylphosphine; In tetrahydrofuran; at 0 - 20℃; for 72h; | Triphenylphosphine (1 .21 g, 4.60 mmol) was added to a solution of 5-fluoroquinolin-8- ol (500 mg, 3.06 mmol) in tetrahydrofuran (10 mL). The reaction mixture was cooled to 0 C, and methyl 3-hydroxycyclobutanecarboxylate (0.49 mL, 4.6 mmol) was added, followed by DIAD (0.89 mL, 4.6 mmol). After 10 min, the reaction mixture was warmed to room temperature, stirred for 3 days and diluted with water and EtOAc. The mixture was partitioned, and the aqueous layer was extracted with EtOAc (2X). The organic layer was washed with water, dried over sodium sulfate, filtered, and concentrated. The residue was purified on silica gel eluting with a 0%-100% EtOAc-hexanes gradient to give a mixture of cis and trans isomers which were separated on a Whelk O RR 20 X 250 mm column eluting with 40% EtOH in hexanes to give the title compound (415 mg, 49%). 1H NMR (400 MHz, CD3SOCD3) delta 2.48-2.55 (m, 2 H), 2.77 (ddd, J = 13, 7, 4 Hz, 2 H), 3.21 -3.29 (m, 1 H), 3.66 (s, 3 H), 5.04 (t, J = 7 Hz, 1 H), 6.96 (dd, J = 9, 5 Hz, 1 H), 7.32 (dd, J = 10, 9 Hz, 1 H), 7.68 (dd, J = 8, 4 Hz, 1 H), 8.44 (dd, J = 8, 2 Hz, 1 H), 8.97 (dd, J = 4, 2 Hz, 1 H); LC-MS (LC-ES) M+H = 276. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
21% | With di-isopropyl azodicarboxylate; triphenylphosphine; In tetrahydrofuran; at 0 - 20℃; for 72.0h; | 8-0I (Intermediate 126A) (380 mg, 2.23 mmol) in tetrahydrofuran (10 mL). The reaction mixture was cooled to 0 C, and methyl 3-hydroxycyclobutanecarboxylate (0.37 mL, 3.5 mmol) was added, followed by DIAD (0.68 mL, 3.5 mmol). After 10 min, the reaction mixture was warmed to room temperature, stirred for 3 days and diluted with water and EtOAc. The mixture was partitioned, and the aqueous layer was extracted with EtOAc (2X). The organic layer was washed with water, dried over sodium sulfate, filtered, and concentrated. The residue was purified on silica gel eluting with a 0%-1 00% EtOAc-hexanes gradient to give a mixture of cis and trans isomers which were separated on an IC 30 X 250 mm column eluting with 50% EtOH in hexanes to give the title compound (137 mg, 21 %). 1H NMR (400 MHz, CD3SOCD3) delta 2.48- 2.59 (m, 2 H), 2.82 (ddd, J = 14, 7, 5 Hz, 2 H), 3.22-3.32 (m, 1 H), 3.31 (s, 3 H), 5.07 (t, J = 7 Hz, 1 H), 6.91 (dd, J = 1 1 , 3 Hz, 1 H), 7.31 (dd, J = 9, 3 Hz, 1 H), 7.59 (dd, J = 8, 4 Hz, 1 H), 8.30 (dd, J = 8, 2 Hz, 1 H), 8.83 (dd, J = 4, 2 Hz, 1 H); LC-MS (LC-ES) M+H = 276. |
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