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Chemical Structure| 3906-87-4 Chemical Structure| 3906-87-4

Structure of 3906-87-4

Chemical Structure| 3906-87-4

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Miller, Lars ;

Abstract: This work explores the synthesis and characterization of redox active rare-earth (RE) metal–organic frameworks (MOFs). MOFs are of interest due to their unique properties including permanent porosity, high surface area, and stability. Redox active MOFs have shown promise in a variety of applications including catalysis and molecular electronics. The second chapter will explore materials composed of Ce(IV) clusters bridged by ditopic carboxylate-based linkers. The synthesis of a series of UiO-66 analogues using the redox active metal Ce(IV) is completed with the original linker benzene-1,4-dicarboxylic acid as well as with various functionalized linkers including: 2-aminobenzene-1,4-dicarboxylic acid, 2-fluorobenzene1,4-dicarboxylic acid, 2-bromobenzene-1,4-dicarboxylic acid, 2,5-dihydroxybenzene-1,4- dicarboxylic acid, and 2,3,5,6-tetrafluorobenzene-1,4-dicarboxylic acid. The electrochemical differences between the analogues is explored via cyclic voltammetry. The third chapter delves into the synthesis of a series of redox active MOFs using the tetratopic tetrathiaflvalene-3,4,5,6-tetrakis(4-benzoic acid) (TTFTBA) redox active linker. Synthesis of a 3D cluster based MOF is attempted using Ce(III/IV), Yb(III), and Lu(III). Two new MOFs with shp topology are synthesized using TTFTBA and Yb(III) or Lu(III). The materials are characterized, and their redox properties are explored.

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Alternative Products

Product Details of [ 3906-87-4 ]

CAS No. :3906-87-4
Formula : C8H5FO4
M.W : 184.12
SMILES Code : O=C(O)C1=CC=C(C(O)=O)C=C1F
MDL No. :MFCD03407274
InChI Key :YUWKPDBHJFNMAD-UHFFFAOYSA-N
Pubchem ID :77511

Safety of [ 3906-87-4 ]

GHS Pictogram:
Signal Word:Warning
Hazard Statements:H315-H319-H335
Precautionary Statements:P261-P305+P351+P338

Computational Chemistry of [ 3906-87-4 ] Show Less

Physicochemical Properties

Num. heavy atoms 13
Num. arom. heavy atoms 6
Fraction Csp3 0.0
Num. rotatable bonds 2
Num. H-bond acceptors 5.0
Num. H-bond donors 2.0
Molar Refractivity 40.32
TPSA ?

Topological Polar Surface Area: Calculated from
Ertl P. et al. 2000 J. Med. Chem.

74.6 Ų

Lipophilicity

Log Po/w (iLOGP)?

iLOGP: in-house physics-based method implemented from
Daina A et al. 2014 J. Chem. Inf. Model.

0.75
Log Po/w (XLOGP3)?

XLOGP3: Atomistic and knowledge-based method calculated by
XLOGP program, version 3.2.2, courtesy of CCBG, Shanghai Institute of Organic Chemistry

1.5
Log Po/w (WLOGP)?

WLOGP: Atomistic method implemented from
Wildman SA and Crippen GM. 1999 J. Chem. Inf. Model.

1.64
Log Po/w (MLOGP)?

MLOGP: Topological method implemented from
Moriguchi I. et al. 1992 Chem. Pharm. Bull.
Moriguchi I. et al. 1994 Chem. Pharm. Bull.
Lipinski PA. et al. 2001 Adv. Drug. Deliv. Rev.

1.62
Log Po/w (SILICOS-IT)?

SILICOS-IT: Hybrid fragmental/topological method calculated by
FILTER-IT program, version 1.0.2, courtesy of SILICOS-IT, http://www.silicos-it.com

1.05
Consensus Log Po/w?

Consensus Log Po/w: Average of all five predictions

1.31

Water Solubility

Log S (ESOL):?

ESOL: Topological method implemented from
Delaney JS. 2004 J. Chem. Inf. Model.

-2.14
Solubility 1.35 mg/ml ; 0.00731 mol/l
Class?

Solubility class: Log S scale
Insoluble < -10 < Poorly < -6 < Moderately < -4 < Soluble < -2 Very < 0 < Highly

Soluble
Log S (Ali)?

Ali: Topological method implemented from
Ali J. et al. 2012 J. Chem. Inf. Model.

-2.67
Solubility 0.39 mg/ml ; 0.00212 mol/l
Class?

Solubility class: Log S scale
Insoluble < -10 < Poorly < -6 < Moderately < -4 < Soluble < -2 Very < 0 < Highly

Soluble
Log S (SILICOS-IT)?

SILICOS-IT: Fragmental method calculated by
FILTER-IT program, version 1.0.2, courtesy of SILICOS-IT, http://www.silicos-it.com

-1.43
Solubility 6.92 mg/ml ; 0.0376 mol/l
Class?

Solubility class: Log S scale
Insoluble < -10 < Poorly < -6 < Moderately < -4 < Soluble < -2 Very < 0 < Highly

Soluble

Pharmacokinetics

GI absorption?

Gatrointestinal absorption: according to the white of the BOILED-Egg

High
BBB permeant?

BBB permeation: according to the yolk of the BOILED-Egg

No
P-gp substrate?

P-glycoprotein substrate: SVM model built on 1033 molecules (training set)
and tested on 415 molecules (test set)
10-fold CV: ACC=0.72 / AUC=0.77
External: ACC=0.88 / AUC=0.94

No
CYP1A2 inhibitor?

Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set)
and tested on 3000 molecules (test set)
10-fold CV: ACC=0.83 / AUC=0.90
External: ACC=0.84 / AUC=0.91

No
CYP2C19 inhibitor?

Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set)
and tested on 3000 molecules (test set)
10-fold CV: ACC=0.80 / AUC=0.86
External: ACC=0.80 / AUC=0.87

No
CYP2C9 inhibitor?

Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set)
and tested on 2075 molecules (test set)
10-fold CV: ACC=0.78 / AUC=0.85
External: ACC=0.71 / AUC=0.81

No
CYP2D6 inhibitor?

Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set)
and tested on 1068 molecules (test set)
10-fold CV: ACC=0.79 / AUC=0.85
External: ACC=0.81 / AUC=0.87

No
CYP3A4 inhibitor?

Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set)
and tested on 2579 molecules (test set)
10-fold CV: ACC=0.77 / AUC=0.85
External: ACC=0.78 / AUC=0.86

No
Log Kp (skin permeation)?

Skin permeation: QSPR model implemented from
Potts RO and Guy RH. 1992 Pharm. Res.

-6.36 cm/s

Druglikeness

Lipinski?

Lipinski (Pfizer) filter: implemented from
Lipinski CA. et al. 2001 Adv. Drug Deliv. Rev.
MW ≤ 500
MLOGP ≤ 4.15
N or O ≤ 10
NH or OH ≤ 5

0.0
Ghose?

Ghose filter: implemented from
Ghose AK. et al. 1999 J. Comb. Chem.
160 ≤ MW ≤ 480
-0.4 ≤ WLOGP ≤ 5.6
40 ≤ MR ≤ 130
20 ≤ atoms ≤ 70

None
Veber?

Veber (GSK) filter: implemented from
Veber DF. et al. 2002 J. Med. Chem.
Rotatable bonds ≤ 10
TPSA ≤ 140

0.0
Egan?

Egan (Pharmacia) filter: implemented from
Egan WJ. et al. 2000 J. Med. Chem.
WLOGP ≤ 5.88
TPSA ≤ 131.6

0.0
Muegge?

Muegge (Bayer) filter: implemented from
Muegge I. et al. 2001 J. Med. Chem.
200 ≤ MW ≤ 600
-2 ≤ XLOGP ≤ 5
TPSA ≤ 150
Num. rings ≤ 7
Num. carbon > 4
Num. heteroatoms > 1
Num. rotatable bonds ≤ 15
H-bond acc. ≤ 10
H-bond don. ≤ 5

1.0
Bioavailability Score?

Abbott Bioavailability Score: Probability of F > 10% in rat
implemented from
Martin YC. 2005 J. Med. Chem.

0.56

Medicinal Chemistry

PAINS?

Pan Assay Interference Structures: implemented from
Baell JB. & Holloway GA. 2010 J. Med. Chem.

0.0 alert
Brenk?

Structural Alert: implemented from
Brenk R. et al. 2008 ChemMedChem

0.0 alert: heavy_metal
Leadlikeness?

Leadlikeness: implemented from
Teague SJ. 1999 Angew. Chem. Int. Ed.
250 ≤ MW ≤ 350
XLOGP ≤ 3.5
Num. rotatable bonds ≤ 7

No; 1 violation:MW<1.0
Synthetic accessibility?

Synthetic accessibility score: from 1 (very easy) to 10 (very difficult)
based on 1024 fragmental contributions (FP2) modulated by size and complexity penaties,
trained on 12'782'590 molecules and tested on 40 external molecules (r2 = 0.94)

1.29

Application In Synthesis of [ 3906-87-4 ]

* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.

  • Downstream synthetic route of [ 3906-87-4 ]

[ 3906-87-4 ] Synthesis Path-Downstream   1~26

  • 2
  • tungsten 2,2-dimethylpropionate [ No CAS ]
  • [ 3906-87-4 ]
  • [ 873784-84-0 ]
  • 3
  • [ 280-57-9 ]
  • copper(ll) sulfate pentahydrate [ No CAS ]
  • [ 3906-87-4 ]
  • [Cu2(2-fluoroterephthalate)2(triethylenediamine)]n [ No CAS ]
  • 4
  • [ 5292-47-7 ]
  • [ 3906-87-4 ]
YieldReaction ConditionsOperation in experiment
With water; sodium hydroxide; In methanol; at 20℃; To a stirred solution of dimethyl 2- fluoroterephthalate (1 .00 g, 4.71 mmol) in a mixture of CH3OH (10.0 ml.) and H20 (5.00 ml.) at r.t, was added NaOH (0.94 g, 23.5 mmol) and the reaction mixture was stirred for 3 h. The reaction mixture was concentrated under reduced pressure to remove the volatile solvents, and the aqueous phase was acidified to pH 2 using 2N aqueous HCI, whereupon, a white solid precipitated. The solid was filtered under vacuum, washed with water (10 ml_), and dried to obtain 2-fluoroterephthalic acid.
  • 5
  • [ 3906-87-4 ]
  • [ 10026-11-6 ]
  • [ZrO(2-bromo-1,4-benzendicarboxylate)] [ No CAS ]
  • 6
  • [ 7647-01-0 ]
  • [ 7722-64-7 ]
  • [ 350-28-7 ]
  • [ 3906-87-4 ]
  • 7
  • [ 16774-21-3 ]
  • [ 3906-87-4 ]
  • [ 7732-18-5 ]
  • 6C8H3FO4(2-)*4HO(1-)*6Ce(4+)*4O(2-) [ No CAS ]
  • 8
  • dimethyl 2-fluoroterephthalate [ No CAS ]
  • [ 3906-87-4 ]
  • 9
  • [ 3906-87-4 ]
  • [ 10026-11-6 ]
  • [ZrO(2-fluoro-1,4-benzendicarboxylate)] [ No CAS ]
  • 10
  • chromium(VI) oxide [ No CAS ]
  • [ 7647-01-0 ]
  • [ 3906-87-4 ]
  • 3Cr(3+)*O(2-)*Cl(1-)*2H2O*3C8H3FO4(2-) [ No CAS ]
YieldReaction ConditionsOperation in experiment
280 mg In water; at 180℃; for 144h;Autoclave; High pressure; General procedure: A mixture of CrO3 (125 mg, 1.25 mmol), H2BDC-X linker (1.25 mmol), water (5 mL)and conc. HCl (0.15 mL, 4.89 mmol) was placed in a 50 mL Teflon-lined stainless steel autoclave and heated at 180 °C for 144 h in a conventional oven. After cooling to room temperature, the green materials were collected by filtration using membrane filters, washed with acetone (35 mL) and dried in air. The yields of the Cr-MIL-101-X compounds were: ?F, 280 mg; ?Cl, 285 mg; ?Br, 350 mg; ?CH3, 295 mg; ?F2, 300 mg; ?(CH3)2, 305 mg.
  • 11
  • europium(III) nitrate hexahydrate [ No CAS ]
  • [ 3906-87-4 ]
  • [ 7732-18-5 ]
  • [ 7697-37-2 ]
  • [ 68-12-2 ]
  • 6C8H3FO4(2-)*2C2H7N*6H2O*8HO(1-)*6Eu(3+)*2H(1+) [ No CAS ]
  • 12
  • [ 3906-87-4 ]
  • [ 21696-09-3 ]
  • 13
  • [ 3906-87-4 ]
  • (x)C2HF3O2*C26H23FN6O2 [ No CAS ]
  • 14
  • [ 3906-87-4 ]
  • 2-fluoroterephthalic acid chloride [ No CAS ]
  • 15
  • [ 67-56-1 ]
  • [ 3906-87-4 ]
  • [ 5292-47-7 ]
  • 16
  • [ 350-28-7 ]
  • [ 3906-87-4 ]
  • 17
  • [ 3906-87-4 ]
  • [ 6638-79-5 ]
  • 2-fluoro-N1,N4-dimethoxy-N1,N4-dimethylterephthalamide [ No CAS ]
YieldReaction ConditionsOperation in experiment
With 2,4,6-tripropyl-1,3,5,2,4,6-trioxatriphosphinane-2,4,6-trioxide; triethylamine; In ethyl acetate; N,N-dimethyl-formamide; at 0 - 20℃; for 4h;Inert atmosphere; To a stirred solution of <strong>[3906-87-4]2-fluoroterephthalic acid</strong> (0.80 g, 4.34 mmol) in anhydrous DMF (10.0 ml_), at 0 C under N2atmosphere, was added Et3N (1.21 ml_, 8.69 mmol), T3P (50% soluiton in EtOAc,6.92 ml_, 10.86 mmol) followed with N, O-dimethylhydroxylamine hydrochloride (0.84 g, 8.69 mmol), and the reaction mixture was stirred at r.t for 4 h. The product was purified by silica gel chromatography using EtOAc: Hexanes (1 :1 ). The fractions containing the product were combined for concentration to obtain 2-fluoro-N1 ,N4-dimethoxy-N1 ,N4- dimethylterephthalamide.
  • 18
  • [ 3906-87-4 ]
  • bis(2-(dimethylamino)ethyl) 2,2'-(2-fluoro-1,4-phenylene)bis(1H-benzo[d]imidazole-6-carboxylate) [ No CAS ]
  • 19
  • [ 3906-87-4 ]
  • 2-fluoroterephthalaldehyde [ No CAS ]
  • 20
  • [ 3906-87-4 ]
  • 2,2'-(2-fluoro-1,4-phenylene)bis(1H-benzo[d]imidazole-6-carboxylic acid) [ No CAS ]
  • 21
  • [ 915143-25-8 ]
  • [ 3906-87-4 ]
  • (3-[[2-(4-[6-[3-(dimethylamino)propoxy]-5-fluoro-1H-1,3-benzodiazol-2-yl]-3-fluorophenyl)-5-fluoro-1H-1,3-benzodiazol-6-yl]oxy]propyl)dimethylamine [ No CAS ]
  • 22
  • [ 915143-25-8 ]
  • [ 3906-87-4 ]
  • N1,N4-bis([2-amino-4-[3-(dimethylamino)propoxy]-5-fluorophenyl])-2-fluorobenzene-1,4-dicarboxamide [ No CAS ]
YieldReaction ConditionsOperation in experiment
With benzotriazol-1-ol; 1-ethyl-(3-(3-dimethylamino)propyl)-carbodiimide hydrochloride; triethylamine; In N,N-dimethyl-formamide; at 0 - 25℃; for 16h;Inert atmosphere; Synthesis of N1 ,N4-bis([2-amino-4-[3-(dimethylamino)propoxy]-5-fluorophenyl])-2- fluorobenzene-1 , 4-dicarboxamide Into a 50-mL of round-bottom flask purged and maintained with an inert atmosphere of nitrogen, was placed a solution of 4-[3-(dimethylamino)propoxy]-5- fluorobenzene-1 , 2-diamine (300 mg, 2.5 equiv), EDCI (304 mg, 3 equiv), HOBT (214 mg, 3 equiv) and 2-fluorobenzene-1 ,4-dicarboxylic acid (97 mg, 1 equiv) in DMF(10 ml). Then TEA (533 mg, 10 equiv) was added at 0C. The resulting solution was stirred at 25C for 16 hours. The crude product was purified by Prep-HPLC. This resulted in N1 ,N4-bis([2-amino-4-[3- (dimethylamino)propoxy]-5-fluorophenyl])-2-fluorobenzene-1 ,4-dicarboxamide.
  • 23
  • [ 3906-87-4 ]
  • 4-(3-(dimethylamino)propoxy)benzene-1,2-diamine [ No CAS ]
  • N1,N4-bis([2-amino-4-[3-(dimethylamino)propoxy]phenyl])-2-fluorobenzene-1,4-dicarboxamide [ No CAS ]
YieldReaction ConditionsOperation in experiment
With N-ethyl-N,N-diisopropylamine; N-[(dimethylamino)-3-oxo-1H-1,2,3-triazolo[4,5-b]pyridin-1-yl-methylene]-N-methylmethanaminium hexafluorophosphate; In N,N-dimethyl-formamide; at 20℃; for 12h;Inert atmosphere; Into a 10-mL round-bottom flask purged and maintained with an inert atmosphere of nitrogen was placed a solution of 2-fluorobenzene-1 ,4- dicarboxylic acid (200 mg, 1.086 mmol, 1 equiv), 4-[3-(dimethylamino)propoxy]benzene-1 ,2- diamine (682 mg, 3.258 mmol, 3 equiv) and HATU (1.24 mg, 3.26 mmol, 3 equiv) in anhydrous DMF (5 ml). Then DIEA (702 mg, 5.432 mmol, 5 equiv) was added at rt. The reaction mixture was stirred at room temperature for 12h. The reaction mixture was purified by pre-TLC(MeOH:TEA=100:1 ) to afford desired product N1 ,N4-bis([2-amino-4-[3- (dimethylamino)propoxy]phenyl])-2-fluorobenzene-1 , 4-dicarboxamide
  • 24
  • [ 3906-87-4 ]
  • 4-(3-(dimethylamino)propoxy)benzene-1,2-diamine [ No CAS ]
  • C30H35FN6O2 [ No CAS ]
  • 25
  • [ 110-53-2 ]
  • [ 3906-87-4 ]
  • 2-fluoroterephthalic acid diamyl ester [ No CAS ]
YieldReaction ConditionsOperation in experiment
Add 2.2g to 50mL DMF solvent<strong>[3906-87-4]2-fluoroterephthalic acid</strong> (0.012 mol) and 4.8 g potassium hydrogencarbonate (0.048 mol),Stir at room temperature to form a potassium salt.1.81 g of n-bromopentane (0.03 mol) was added to the mixed solution,The reaction was stirred at 90 C for 12 hours. Stop the reaction and allow the solution to cool to room temperature.It was poured into 300 mL of water and extracted with ethyl acetate.Dry over anhydrous sodium sulfate, filter and spin dry solvent.Petroleum ether/ethyl acetate (20/1) for crude productsColumn chromatography for the eluent.
  • 26
  • [ 3906-87-4 ]
  • [ 68-12-2 ]
  • 3Mg(2+)*3C8H3FO4(2-)*4C3H7NO [ No CAS ]
 

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