Structure of 34662-24-3
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CAS No. : | 34662-24-3 |
Formula : | C7H3ClN2O2 |
M.W : | 182.56 |
SMILES Code : | N#CC1=CC=CC([N+]([O-])=O)=C1Cl |
MDL No. : | MFCD11044838 |
InChI Key : | AGZYMTWFJLEBIJ-UHFFFAOYSA-N |
Pubchem ID : | 21786011 |
GHS Pictogram: |
![]() |
Signal Word: | Warning |
Hazard Statements: | H302+H312+H332-H315-H319-H335 |
Precautionary Statements: | P261-P280-P305+P351+P338 |
Num. heavy atoms | 12 |
Num. arom. heavy atoms | 6 |
Fraction Csp3 | 0.0 |
Num. rotatable bonds | 1 |
Num. H-bond acceptors | 3.0 |
Num. H-bond donors | 0.0 |
Molar Refractivity | 44.99 |
TPSA ? Topological Polar Surface Area: Calculated from |
69.61 Ų |
Log Po/w (iLOGP)? iLOGP: in-house physics-based method implemented from |
1.25 |
Log Po/w (XLOGP3)? XLOGP3: Atomistic and knowledge-based method calculated by |
2.14 |
Log Po/w (WLOGP)? WLOGP: Atomistic method implemented from |
2.12 |
Log Po/w (MLOGP)? MLOGP: Topological method implemented from |
0.86 |
Log Po/w (SILICOS-IT)? SILICOS-IT: Hybrid fragmental/topological method calculated by |
0.29 |
Consensus Log Po/w? Consensus Log Po/w: Average of all five predictions |
1.33 |
Log S (ESOL):? ESOL: Topological method implemented from |
-2.62 |
Solubility | 0.434 mg/ml ; 0.00238 mol/l |
Class? Solubility class: Log S scale |
Soluble |
Log S (Ali)? Ali: Topological method implemented from |
-3.23 |
Solubility | 0.107 mg/ml ; 0.000584 mol/l |
Class? Solubility class: Log S scale |
Soluble |
Log S (SILICOS-IT)? SILICOS-IT: Fragmental method calculated by |
-2.48 |
Solubility | 0.605 mg/ml ; 0.00331 mol/l |
Class? Solubility class: Log S scale |
Soluble |
GI absorption? Gatrointestinal absorption: according to the white of the BOILED-Egg |
High |
BBB permeant? BBB permeation: according to the yolk of the BOILED-Egg |
Yes |
P-gp substrate? P-glycoprotein substrate: SVM model built on 1033 molecules (training set) |
No |
CYP1A2 inhibitor? Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set) |
Yes |
CYP2C19 inhibitor? Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set) |
No |
CYP2C9 inhibitor? Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set) |
No |
CYP2D6 inhibitor? Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set) |
No |
CYP3A4 inhibitor? Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set) |
No |
Log Kp (skin permeation)? Skin permeation: QSPR model implemented from |
-5.89 cm/s |
Lipinski? Lipinski (Pfizer) filter: implemented from |
0.0 |
Ghose? Ghose filter: implemented from |
None |
Veber? Veber (GSK) filter: implemented from |
0.0 |
Egan? Egan (Pharmacia) filter: implemented from |
0.0 |
Muegge? Muegge (Bayer) filter: implemented from |
1.0 |
Bioavailability Score? Abbott Bioavailability Score: Probability of F > 10% in rat |
0.55 |
PAINS? Pan Assay Interference Structures: implemented from |
0.0 alert |
Brenk? Structural Alert: implemented from |
2.0 alert: heavy_metal |
Leadlikeness? Leadlikeness: implemented from |
No; 1 violation:MW<1.0 |
Synthetic accessibility? Synthetic accessibility score: from 1 (very easy) to 10 (very difficult) |
1.88 |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
99% | With trimethylsilylphosphate; at 20℃; for 20.0h; | Step b) intermediate 10Synthesis of 2-chloro-3-nitrobenzonitrile2-chloro-3-nitrobenzamide (83 g, 0.413 mol, well dried) is added to the refluxing solution of dehydrating agent* and this mixture is then left at this temperature for 4 hours and at room temperature for 16 hours. The mixture is quenched with ice, 400 ml of water is added to facilitate the phase separation and the aqueous phase is discarded. The organic phase is washed with water and brine and then dried over anhydrous Na2SO4. The solution is filtered and concentrated to give the desired product (74.4g, 99 %) .IH NMR (300MHz, DMSO-d6) delta ppm 7.76 (t, /=7.93 Hz, IH) 8.27 (dd, /=7.93 1.47 Hz, IH) 8.36 (dd, /=8.22 1.47 Hz, IH) <n="32"/>* Preparation of trimethylsilyl polyphosphate (dehydrating agent):P2O5 (254g ; 1.79 mol) in 1 litre of anhydrous dichloromethane is stirring under reflux and 330 ml of hexamethyldisiloxane (1.54 mol) is added over 1 hour by a dropping funnel (the reaction is exothermic). The reaction mixture is then left stirring at this temperature for 1 hour. |
74% | With Hexamethyldisiloxane; phosphorus pentoxide; In 1,2-dichloro-ethane; at 85℃; for 18.0h;Heating / reflux; | A solution of 2-chloro-3-nitrobenzamide (1.02 g, 4.9 mmol) in P2O5/(TMS)2O/1,2-dichloroethane (30 mL) was heated at 85 C. for 18 hours. After it was cooled to 25 C., the solution was filtered through a plug of silica gel (60 mL), eluding with 5% methanol/CHCl3 (400 mL). The combined washes were concentrated under reduced pressure to give 2-chloro-3-nitrobenzonitrile as an off-white solid (0.66 g, 74%). 1H NMR [(CD3)2SO]: delta 8.42 (dd, J=8.1, 1.5 Hz, 1H, H4), 8.33 (dd, J=8.1, 1.7 Hz, 1H, H6), 7.81 (t, J=8.3 Hz, 1H, H5). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
92% | With triethylamine; In dimethyl sulfoxide; at 25℃; for 0.5h; | NEt3 (0.16 mL, 1.15 mmol) was added dropwise to a solution of <strong>[34662-24-3]2-chloro-3-nitrobenzonitrile</strong> (191 mg, 1.05 mmol), and methyl thioacetate (0.1 mL, 1.1 mmol) in DMSO (3 mL) at 25 C. stirring under N2. The color of the solution turned dark orange. Thirty minutes later the reaction was quenched with ice water. The formed solid was collected by Buchner filtration and air dried to give methyl 3-amino-7-nitrobenzothiophene-2-carboxylate as a red-orange solid (244 mg, 92%). 1H NMR [(CD3)2SO]: delta 8.67 (dd, J=8.1, 1.0 Hz, 1H, H6), 8.58 (dd, J=7.8, 0.8 Hz, 1H, H4), 7.72 (t, J=7.8 Hz, 1H, H5), 7.37 (brs, 2H, NH2). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With potassium carbonate; In dimethyl sulfoxide; | 2-Amino-4-cyano-1-N-[1-(3,3-diphenylpropyl)-piperidin-4-yl]aniline A mixture of 4-amino-1-(3,3-diphenylpropyl)piperidine di-trifluoroacetate (Method I) (500 mg, 0.96 mmol), <strong>[34662-24-3]2-chloro,3-nitrobenzonitrile</strong> (373 mg, 2.04 mmol) and potassium carbonate (700 mg, 5.05 mmol) in DMSO (4 ml) was heated at 90 C. After 15 h the mixture was poured onto water and extracted with EtOAc (2*30ml). The organics were combined, washed with brine, dried (MgSO4), concentrated and purified by Bond Elut chromatography to give 4-cyano-2-nitro-1-N-[1-(3,3-diphenylpropyl)-piperidin-4-yl]aniline as an oil (300 mg, 0.68 mmol), MS: 442. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
95% | In ethanol; at 135℃; for 3.0h;Irradiation; | A. 2-[(2-Hydroxyethyl)amino]-3-nitrobenzonitrileA solution of <strong>[34662-24-3]2-chloro-3-nitrobenzonitrile</strong> [prepared as described in WO 97/38983] (0.26 0 g, 1.4 mmol) and ethanolamine (0.22 mL, 3.5 mmol) in dry ethanol (3.8 ml) was irradiated in a microwave oven at 135 0C for 180 min. The reaction mixture was concentrated under reduced pressure. The residue was dissolved in ethyl acetate, the organic phase was EPO <DP n="25"/>washed with potassium bisulfate (0.1 M), water and brine, dried over Na2SO4 and concen¬ trated. Purification was performed using flash chromatography on a silica column and 25% ethyl acetate in heptane as an eluent to yield 2-[(2-hydroxyethyl)amino]-3-nitrobenzoni- trile, 0.28 g (95%). 1H NMR (400 MHz, CD3CN) delta ppm: 3.00 (t, J=4.8 Hz, 1 H), 3.68 (q, s J=4.7 Hz, 2 H), 3.81 (m, 2 H)3 6.70 (dd, J=8.6, 7.6 Hz, 1 H), 7.75 (dd, J=7.6, 1.5 Hz, 1 H), 8.28 (dd, J=8.6, 2.0 Hz, 1 H), 8.41 (bs, 1 H). |
89% | In ethanol; at 20℃; for 18.0h;Heating / reflux; | Step c) intermediate 11Synthesis of 2-[(2-hydroxyethyl)amino]-3-nitrobenzonitrile<strong>[34662-24-3]2-chloro-3-nitrobenzonitrile</strong> (74g, 0.408 mol) is mixed with ethanol (370 ml) and ethanolamine (57 ml). The mixture is stirred for 16 hrs at room temperature. To complete the reaction, the mixture is refluxed for 2 hours. After cooling, the mixture is concentrated under vacuum; the product precipitates as a red solid. To eliminate the ethanolamine hydrochloride salt, the suspension is triturated with 500 ml of water and filtrated under vacuum. The solid is washed with ethanol and ether then dried to give the desired product (75g, 89%).IH NMR (300MHz, DMSO-d6) delta ppm 3.55-3.60 (m,2H) 3.69-3.74 (m,2H) 6.75 (dd, 7=7.63, 8.52 Hz, 2H) 7.90 (dd, /=7.63, 1.76 Hz, 2H) 8.27 (dd, /=8.52, 1.76 Hz, IH) 3.35 m, IH) |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With ammonia; In ethanol; at 18 - 110℃; for 12.0h;Sealed tube; | A solution of anhydrous EtOH (20 mL) was bubbled through NH3 at 0C to obtain 7M NH3/EtOH. It was transfered intoa sealed tube containing <strong>[34662-24-3]2-chloro-3-nitrobenzonitrile</strong> (0.5 g, 2.7 mmol, 1.0 eq). The mixture was allowed to warm to 18C gradually and then stirred at 110C for 12 hours. The mixture was evaporated under reduced pressure to remove the most solvent to give 0.5 g of crude 2- amino-3-nitrobenzonitrile as a yellow solid which was used in the next step without further purification. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
93% | With N-ethyl-N,N-diisopropylamine; In 1,4-dioxane; at 150℃; for 1.0h; | Example 1732- [4-(l-Benzofuran-5-yl)phenyl]-l-[(3S)-l-(cyclopropylcarbonyl)-3- pyrrolidinyl] methyl}- lH-benzimidazole-7-carbonitrile(a) 2-([(3S)-l-(Cyclopropylcarbonyl)-3-pyrrolidinyl]methyl}amino)-3- nitrobenzonitrileA mixture of [(3S)-l-(cyclopropylcarbonyl)-3-pyrrolidinyl]methyl}amine (553 mg, 3.29 mmol), 2-chloro-3 -nitrobenzonitrile (500 mg, 2.74 mmol), and DIEA (1.431 mL, 8.22 mmol) were dissolved in 1,4-dioxane (10 mL) in a microwave Vial. The mixture was heated at 150 C for 1 hour. The mixture was evaporated, taken up in DCM and washed with water. The aqueous layer was extracted with DCM and the combined organics evaporated and purified by silica gel column chromatography using a gradient of 0-5% MeOH/DCM to afford the titled compound (800 mg, 2.55 mmol, 93 % yield) as an orange solid. 1H NMR (400 MHz, chloroform-d) delta ppm 0.71-0.88 (m, 2 H) 0.94-1.12 (m, 2 H) 1.59-1.69 (m, 1 H) 1.69-2.00 (m, 1 H) 2.11-2.41 (m, 1 H) 2.55-2.92 (m, 0 H) 3.16-4.11 (m, 6 H) 6.80 (ddd, J=10.04, 8.40, 7.58 Hz, 1 H) 7.79 (ddd, J=9.35, 7.71, 1.39 Hz, 1 H) 8.27- 8.49 (m, 1 H) 8.53-8.80 (m, 1 H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With dimethylsulfide borane complex; In tetrahydrofuran; for 2.0h;Reflux; Inert atmosphere; | To a solution of <strong>[34662-24-3]2-chloro-3-nitrobenzonitrile</strong> (200 mg, 1 .3 mmol) in absolute THF (20 mL) was added dropwise BH3SMe2 (0.2 mL, 2.6 mmol) under nitrogen atmosphere protection. The mixture was stirred at reflux for 2 hrs. Then 2 N HCI (1 .5 mL) was added to the mixture and the mixture was stirred at reflux for 1 hour. The mixture was condensed to crude compound CI-1 -5B (248 mg) as yellow solid. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
67% | With potassium carbonate; In N,N-dimethyl acetamide; at 80℃; for 4.0h;Inert atmosphere; | A solution of the aforementioned intermediate 3 (1 g, 5.4 mmol), 2- chloro-3- nitrobenzonitrile 4 (1.6 g, 8.8 mmol) and potassium carbonate (2.2 g, 15.9 mmol) in N,N-dimethylacetamide (30 mL) was heated at 80 C for 4 hours under nitrogen atmosphere, the reaction solution was cooled down and concentrated in vacuo, and the residue was purified by flash chromatography (petroleum ether / ethyl acetate =4 : 1) to give tert-butyl 2-(2-cyano-6- nitrophenyl)-3-cyclopropyl-3-oxopropanoate 5 (1.2 g, 67%) as a brown solid. 1H-NMR (300 MHz, CDC13): delta 13.53 (s,lH), 8.10 (dd, J= 1.2 Hz, J= 8.4 Hz, 1H), 7.91 (dd, J= 1.2 Hz, J = 8.4 Hz, 1H), 7.57 (3.42 J= 7.8 Hz, lH),1.48 (m, 1H), 1.34 (s, 9H), 1.30 (d, J = 7.2 Hz, 4H). |
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