Structure of 31872-64-7
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The BI-3802 was designed by Boehringer Ingelheim and could be obtained free of charge through the Boehringer Ingelheim open innovation portal opnMe.com, associated with its negative control.
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CAS No. : | 31872-64-7 |
Formula : | C5H3ClN2O3 |
M.W : | 174.54 |
SMILES Code : | OC1=C(Cl)C=NC=C1[N+]([O-])=O |
MDL No. : | MFCD11044290 |
InChI Key : | VEOKYVSPRSTYHS-UHFFFAOYSA-N |
Pubchem ID : | 11850826 |
GHS Pictogram: |
![]() |
Signal Word: | Warning |
Hazard Statements: | H302 |
Precautionary Statements: | P280-P305+P351+P338 |
Num. heavy atoms | 11 |
Num. arom. heavy atoms | 6 |
Fraction Csp3 | 0.0 |
Num. rotatable bonds | 1 |
Num. H-bond acceptors | 4.0 |
Num. H-bond donors | 1.0 |
Molar Refractivity | 40.09 |
TPSA ? Topological Polar Surface Area: Calculated from |
78.94 Ų |
Log Po/w (iLOGP)? iLOGP: in-house physics-based method implemented from |
0.95 |
Log Po/w (XLOGP3)? XLOGP3: Atomistic and knowledge-based method calculated by |
1.5 |
Log Po/w (WLOGP)? WLOGP: Atomistic method implemented from |
1.35 |
Log Po/w (MLOGP)? MLOGP: Topological method implemented from |
-0.7 |
Log Po/w (SILICOS-IT)? SILICOS-IT: Hybrid fragmental/topological method calculated by |
-0.53 |
Consensus Log Po/w? Consensus Log Po/w: Average of all five predictions |
0.51 |
Log S (ESOL):? ESOL: Topological method implemented from |
-2.2 |
Solubility | 1.09 mg/ml ; 0.00624 mol/l |
Class? Solubility class: Log S scale |
Soluble |
Log S (Ali)? Ali: Topological method implemented from |
-2.77 |
Solubility | 0.3 mg/ml ; 0.00172 mol/l |
Class? Solubility class: Log S scale |
Soluble |
Log S (SILICOS-IT)? SILICOS-IT: Fragmental method calculated by |
-1.44 |
Solubility | 6.29 mg/ml ; 0.0361 mol/l |
Class? Solubility class: Log S scale |
Soluble |
GI absorption? Gatrointestinal absorption: according to the white of the BOILED-Egg |
High |
BBB permeant? BBB permeation: according to the yolk of the BOILED-Egg |
No |
P-gp substrate? P-glycoprotein substrate: SVM model built on 1033 molecules (training set) |
No |
CYP1A2 inhibitor? Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set) |
No |
CYP2C19 inhibitor? Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set) |
No |
CYP2C9 inhibitor? Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set) |
No |
CYP2D6 inhibitor? Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set) |
No |
CYP3A4 inhibitor? Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set) |
No |
Log Kp (skin permeation)? Skin permeation: QSPR model implemented from |
-6.3 cm/s |
Lipinski? Lipinski (Pfizer) filter: implemented from |
0.0 |
Ghose? Ghose filter: implemented from |
None |
Veber? Veber (GSK) filter: implemented from |
0.0 |
Egan? Egan (Pharmacia) filter: implemented from |
0.0 |
Muegge? Muegge (Bayer) filter: implemented from |
1.0 |
Bioavailability Score? Abbott Bioavailability Score: Probability of F > 10% in rat |
0.55 |
PAINS? Pan Assay Interference Structures: implemented from |
0.0 alert |
Brenk? Structural Alert: implemented from |
2.0 alert: heavy_metal |
Leadlikeness? Leadlikeness: implemented from |
No; 1 violation:MW<1.0 |
Synthetic accessibility? Synthetic accessibility score: from 1 (very easy) to 10 (very difficult) |
1.99 |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
90% | With trichlorophosphate; In toluene; at 20 - 100℃; | To a suspension of 9-b (35 g, 147.52 mol) in toluene (50 mL) was added POCI3 (50 mL) at room temperature. The mixture was slowly heated to 100C and stirred overnight at that temperature. The mixture was cooled to room temperature and concentrated. To the resulting residue ice-water was carefully added then the resulting mixture was extracted with ethyl acetate. The organic layers were separated, washed with water and brine, dried over anhydrous Na2S04 and evaporated. The intermediate 9-c was obtained (25 g, 90%). |
90% | With trichlorophosphate; In toluene; at 100℃; | To a suspension of 18-a (35 g, 147.52 mol) in toluene (50 mL) was added POCI3 (50 mL) at room temperature. The mixture was slowly heated to 100C and stirred overnight at that temperature. The mixture was cooled to room temperature and concentrated. To the resulting residue ice-water was carefully added then the resulting mixture was extracted with ethyl acetate. The organic layers were separated, washed with water and brine, dried over anhydrous Na2S04 and evaporated. The intermediate 18-b was obtained (25 g, 90%). |
Step 2. 3,4-Dichloro-5-nitropyridine; To a mixture of <strong>[31872-64-7]3-chloro-4-hydroxy-5-nitropyridine</strong> (3.45 g, 19.8 mmol) in 20 mL ofDMF at room temperature is added phosphorus oxychloride (1.8 mL, 19.8 mmol). The resulting solution is heated to 1200C for 30 min., and then cooled to 00C. The reaction mixture is neutralized to pH=7 with sat. aqueous NaHCO3 and extracted with EtOAc (2 x 100 mL). The combined organic extracts are dried (Na2SO4), filtered, and evaporated to give a brown oil. Purification by column chromatography (gradient from hexane to 10% EtOAc/hexane) affords the title compound as a white solid. 1H NMR (300 MHz, CDCl3) delta 8.94 (s, IH), 8.83 (s, IH). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
97% | With chlorine; acetic acid; In water; at 20℃; for 20.0h; | To a solution of 3-nitropyridin-4-ol 8-a (20 g, 142.76 mmol, 1 eq.) in 50 % aqueous acetic acid (250 mL) chlorine was bubbled for 20 h at room temperature. The resulting precipitate was filtered and washed with water. The intermediate 9-b was obtained (24 g, 97%). |
97% | With chlorine; acetic acid; In water; at 20℃; for 20.0h; | To a solution of 3-nitropyridin-4-ol 17-a (20 g, 142.76 mmol, 1 eq.) in 50 % aqueous acetic acid (250 mL) chlorine was bubbled for 20 h at room temperature. The resulting precipitate was filtered and washed with water. The intermediate 18-a was obtained (24 g, 97%). |
With N-chloro-succinimide; In acetonitrile; at 70℃;Reflux; | EXAMPLE 11; 4-Chloro-N-(| l-r(3S)-3-methylpiperazin-l-yllcyclohexyljmethyl)-l-pyrimidin-2-yl-lH- pyrrolo [2 ,3 -c 1 pyridine- 3 -carboxamide; Step 1. 3-Chloro-4-hydroxy-5-nitropyridine; A solution of N-chlorosuccinimide (4.6 g, 34.5 mmol) in 25 mL of acetonitrile is added dropwise to a mixture of 4-hydroxy-3-nitropyridine (4.4 g, 31.4 mmol) in 50 mL of acetonitrile.The reaction mixture is then heated to reflux and stirred for 2 days. After cooling to room temperature, the mixture is filtered. The solid is taken up in 100 mL of EtOH and stirred at 700C <n="67"/>for 30 min. The hot mixture is filtered, and the solid is dried in vacuo to afford the title compound as a white powder. 1H NMR (300 MHz, DMSOd6) delta 8.82 (s, IH), 8.28 (s, IH). Mass spec. (174.80, M+H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
96% | With hydrogen; In methanol; under 760.051 Torr; for 8.0h; | Asolution of <strong>[31872-64-7]3-chloro-4-hydroxy-5-nitropyridine</strong> (7.31 g, 42 mmol) in MeOH (400mL) was treated with RaneyNi (1 teaspoon) and hydrogenated for 8 hrs atatmospheric pressure. The mixture was filtered through Celite carefully withoutdrying out the celite/residue and the filtrate evaporated to dryness to afford3-amino-5-chloro-4- hydroxy-pyridine as a dark purple solid (5.8 g at 95%purity, 96% yield); H NMR (500 mHz, DMSO) delta 4.79 (bs, 2H), 7.13 (s, 1H), 7.76(s, 1H), 1 1.50 (bs, 1H). |
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