Structure of 313490-25-4
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The BI-3802 was designed by Boehringer Ingelheim and could be obtained free of charge through the Boehringer Ingelheim open innovation portal opnMe.com, associated with its negative control.
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CAS No. : | 313490-25-4 |
Formula : | C13H16ClNO4 |
M.W : | 285.72 |
SMILES Code : | CC(C)(C)OC(=O)NC(C(O)=O)C1=CC=CC=C1Cl |
MDL No. : | MFCD03426362 |
InChI Key : | XPFJZGJBRMTXCE-UHFFFAOYSA-N |
Pubchem ID : | 2756779 |
GHS Pictogram: |
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Signal Word: | Warning |
Hazard Statements: | H302-H315-H319-H335 |
Precautionary Statements: | P261-P305+P351+P338 |
Num. heavy atoms | 19 |
Num. arom. heavy atoms | 6 |
Fraction Csp3 | 0.38 |
Num. rotatable bonds | 6 |
Num. H-bond acceptors | 4.0 |
Num. H-bond donors | 2.0 |
Molar Refractivity | 71.55 |
TPSA ? Topological Polar Surface Area: Calculated from |
75.63 Ų |
Log Po/w (iLOGP)? iLOGP: in-house physics-based method implemented from |
2.43 |
Log Po/w (XLOGP3)? XLOGP3: Atomistic and knowledge-based method calculated by |
2.85 |
Log Po/w (WLOGP)? WLOGP: Atomistic method implemented from |
2.67 |
Log Po/w (MLOGP)? MLOGP: Topological method implemented from |
2.23 |
Log Po/w (SILICOS-IT)? SILICOS-IT: Hybrid fragmental/topological method calculated by |
1.9 |
Consensus Log Po/w? Consensus Log Po/w: Average of all five predictions |
2.42 |
Log S (ESOL):? ESOL: Topological method implemented from |
-3.24 |
Solubility | 0.163 mg/ml ; 0.000569 mol/l |
Class? Solubility class: Log S scale |
Soluble |
Log S (Ali)? Ali: Topological method implemented from |
-4.1 |
Solubility | 0.0229 mg/ml ; 0.00008 mol/l |
Class? Solubility class: Log S scale |
Moderately soluble |
Log S (SILICOS-IT)? SILICOS-IT: Fragmental method calculated by |
-3.38 |
Solubility | 0.119 mg/ml ; 0.000415 mol/l |
Class? Solubility class: Log S scale |
Soluble |
GI absorption? Gatrointestinal absorption: according to the white of the BOILED-Egg |
High |
BBB permeant? BBB permeation: according to the yolk of the BOILED-Egg |
Yes |
P-gp substrate? P-glycoprotein substrate: SVM model built on 1033 molecules (training set) |
No |
CYP1A2 inhibitor? Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set) |
No |
CYP2C19 inhibitor? Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set) |
No |
CYP2C9 inhibitor? Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set) |
No |
CYP2D6 inhibitor? Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set) |
No |
CYP3A4 inhibitor? Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set) |
No |
Log Kp (skin permeation)? Skin permeation: QSPR model implemented from |
-6.02 cm/s |
Lipinski? Lipinski (Pfizer) filter: implemented from |
0.0 |
Ghose? Ghose filter: implemented from |
None |
Veber? Veber (GSK) filter: implemented from |
0.0 |
Egan? Egan (Pharmacia) filter: implemented from |
0.0 |
Muegge? Muegge (Bayer) filter: implemented from |
0.0 |
Bioavailability Score? Abbott Bioavailability Score: Probability of F > 10% in rat |
0.56 |
PAINS? Pan Assay Interference Structures: implemented from |
0.0 alert |
Brenk? Structural Alert: implemented from |
0.0 alert: heavy_metal |
Leadlikeness? Leadlikeness: implemented from |
No; 1 violation:MW<0.0 |
Synthetic accessibility? Synthetic accessibility score: from 1 (very easy) to 10 (very difficult) |
2.78 |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With O-(1H-benzotriazol-1-yl)-N,N,N',N'-tetramethyluronium hexafluorophosphate; N-ethyl-N,N-diisopropylamine; In N,N-dimethyl-formamide; at 20.0℃;Molecular sieve; | HBTU (6.37 g, 16.80 mmol) is added to a solution of intermediate 38 (prepared according to A4.d-1), 2-chloro-α-[[(l,l-dimethylethoxy)carbonyl]amino]- benzeneacetic acid (4.00 g; 14. mmol), DIPEA (9.3 ml; 56 mmol) in DMF dried on molecular sieves (100 ml). The reaction mixture was stirred at room temperature overnight. The reaction was evaporated to yield 22.53g. The product was purified by reversed-phase high-performance liquid chromatography (Shandon Hyperprep Cl 8 BDS (Base Deactivated Silica) 8 μm, 250 g, LD. 5 cm). A gradient with 2 phases was applied. Phase A: a 0.25 % NH4HCO3 solution in water; phase B: CH3CN). The desired fractions were collected and worked-up. After partial evaporation at 30-35 0C, extraction with CH2Cl2 (2 x 400 ml) followed by EtOAc extraction (300 ml), drying (MgSO4) and work up of the organic phases, 4512 mg residue was obtained from CH2Cl2 and 45 mg from EtOAc. Yield: 4512 mg (54.3 %) (mixture of R and S- enantiomers). This fraction was separated on SFC (column OJ-H, 30 % CH3OH containing 0.2 % isopropylamine) into its enantiomers. Fraction A yielded 1780 mg (R* enantiomer) and fraction B yielded 1770 mg of intermediate 79 (S* enantiomer). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
90% | With benzotriazol-1-ol; 1-ethyl-(3-(3-dimethylamino)propyl)-carbodiimide hydrochloride; In N,N-dimethyl-formamide; at 20.0℃; for 2.0h; | Example 32A tert-Butyl {1-(2-chlorophenyl)-2-[(2-methoxyethyl)-amino]-2-oxoethyl}carbamate A mixture of 250 mg (0.88 mmol) of <strong>[313490-25-4][(tert-butoxycarbonyl)amino](2-chlorophenyl)acetic acid</strong>, 177 mg (1.31 mmol) of HOBt, 252 mg (1.31 mmol) of EDC and 72 mg (0.96 mmol) of 2-methoxyethanamine in 6.3 ml of DMF was stirred at RT for 2 h. For purification, 1 ml of 1N hydrochloric acid was added and the entire reaction mixture was separated by preparative HPLC [Method 6]. The appropriate fraction was concentrated on a rotary evaporator and the residue was dried under high vacuum. This gave 269 mg (90% of theory) of the title compound. LC-MS [Method 5]: Rt=0.88 min; MS [ESIpos]: m/z=343 (M+H)+ 1H-NMR (400 MHz, DMSO-d6): δ [ppm]=1.38 (s, 9H), 3.18-3.29 (m, 2H), 3.22 (s, 3H), 3.29-3.37 (m, 2H), 5.45 (d, 1H), 7.28-7.34 (m, 2H), 7.35-7.46 (m, 2H), 7.49 (d, 1H), 8.06 (br. t, 1H). |