Structure of 2612-28-4
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The BI-3802 was designed by Boehringer Ingelheim and could be obtained free of charge through the Boehringer Ingelheim open innovation portal opnMe.com, associated with its negative control.
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CAS No. : | 2612-28-4 |
Formula : | C6H14O2 |
M.W : | 118.17 |
SMILES Code : | OCC(CCC)CO |
MDL No. : | MFCD00799394 |
InChI Key : | FZHZPYGRGQZBCV-UHFFFAOYSA-N |
Pubchem ID : | 7021156 |
GHS Pictogram: |
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Signal Word: | Warning |
Hazard Statements: | H315-H319-H335 |
Precautionary Statements: | P261-P305+P351+P338 |
Num. heavy atoms | 8 |
Num. arom. heavy atoms | 0 |
Fraction Csp3 | 1.0 |
Num. rotatable bonds | 4 |
Num. H-bond acceptors | 2.0 |
Num. H-bond donors | 2.0 |
Molar Refractivity | 33.28 |
TPSA ? Topological Polar Surface Area: Calculated from |
40.46 Ų |
Log Po/w (iLOGP)? iLOGP: in-house physics-based method implemented from |
1.73 |
Log Po/w (XLOGP3)? XLOGP3: Atomistic and knowledge-based method calculated by |
0.55 |
Log Po/w (WLOGP)? WLOGP: Atomistic method implemented from |
0.39 |
Log Po/w (MLOGP)? MLOGP: Topological method implemented from |
0.61 |
Log Po/w (SILICOS-IT)? SILICOS-IT: Hybrid fragmental/topological method calculated by |
0.61 |
Consensus Log Po/w? Consensus Log Po/w: Average of all five predictions |
0.78 |
Log S (ESOL):? ESOL: Topological method implemented from |
-0.66 |
Solubility | 26.1 mg/ml ; 0.221 mol/l |
Class? Solubility class: Log S scale |
Very soluble |
Log S (Ali)? Ali: Topological method implemented from |
-0.97 |
Solubility | 12.6 mg/ml ; 0.107 mol/l |
Class? Solubility class: Log S scale |
Very soluble |
Log S (SILICOS-IT)? SILICOS-IT: Fragmental method calculated by |
-0.73 |
Solubility | 21.9 mg/ml ; 0.185 mol/l |
Class? Solubility class: Log S scale |
Soluble |
GI absorption? Gatrointestinal absorption: according to the white of the BOILED-Egg |
High |
BBB permeant? BBB permeation: according to the yolk of the BOILED-Egg |
No |
P-gp substrate? P-glycoprotein substrate: SVM model built on 1033 molecules (training set) |
No |
CYP1A2 inhibitor? Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set) |
No |
CYP2C19 inhibitor? Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set) |
No |
CYP2C9 inhibitor? Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set) |
No |
CYP2D6 inhibitor? Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set) |
No |
CYP3A4 inhibitor? Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set) |
No |
Log Kp (skin permeation)? Skin permeation: QSPR model implemented from |
-6.63 cm/s |
Lipinski? Lipinski (Pfizer) filter: implemented from |
0.0 |
Ghose? Ghose filter: implemented from |
None |
Veber? Veber (GSK) filter: implemented from |
0.0 |
Egan? Egan (Pharmacia) filter: implemented from |
0.0 |
Muegge? Muegge (Bayer) filter: implemented from |
1.0 |
Bioavailability Score? Abbott Bioavailability Score: Probability of F > 10% in rat |
0.55 |
PAINS? Pan Assay Interference Structures: implemented from |
0.0 alert |
Brenk? Structural Alert: implemented from |
0.0 alert: heavy_metal |
Leadlikeness? Leadlikeness: implemented from |
No; 1 violation:MW<1.0 |
Synthetic accessibility? Synthetic accessibility score: from 1 (very easy) to 10 (very difficult) |
1.16 |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
84% | With sulfuric acid; hydrogen bromide; sodium carbonate; | REFERENCE EXAMPLE 1 2-n-Propyl-1,3-dibromopropane To a solution of <strong>[2612-28-4]2-n-propylpropane-1,3-diol</strong> (60.0 g., 0.508 mol) in a mixture of 47% hydrobromic acid (211 g., 1.22 mol) and sulphuric acid (63.5 g., 0.65 mol) was added sulphuric acid (103 g., 1.04 mol). The reaction mixture was refluxed for 16 hours and then subjected to steam distillation. The water-insoluble layer of distillates was separated, washed with water (15 ml.) and an aqueous solution of sodium carbonate (15 ml.), dried over calcium chloride and then distilled (20 mm.Hg., 105 C.-110 C.) to give 104 g. of the title compound (84% yield) having the following physical characteristics: b.p.: 105 C.-110 C. (20 mm.Hg); NMR (CCl4): delta; 3.67-3.30 (4H, multiplet), 2.10-1.80 (1H, multiplet), 1.60-1.18 (4H, multiplet), 1.10-0.84 ppm (3H, multiplet); IR (liquid film): nu; 1460, 1255, 1240, 1210 cm-1; Mass spectrum: m/e=246 (M+ +4), 244 (M+ +2), 242 (M+), 163, 83. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
60% | With diisobutylaluminium hydride; In dichloromethane; at -78 - 0℃; for 0.5h; | Example E; Compound 5 ; {2-Methyl-4-[2-(4-trifluoromethyl-phenoxymethyl)-pentylsulfanyl]-phenoxy}-acetic acid; To a solution of 1.0 M diisobutylaluminum hydride (50 mL, 50 mmol) in CH2CI2 at-78C was added diethyl propylmalonate E1 (2.02 g, 10.0 mmol). The reaction mixture was allowed to gradually warm to 0C, stirred at 0C for 30 min, and quenched with MeOH. The precipitated solid was filtered through Celite and washed with MeOH/CH2CI2. The filtrate was concentrated and purified by column chromatography (EtOAc) to give 709 mg (60%) of E2; 1 H NMR (300 MHz, CDC . s) 8 3. 80 (dd, J = 10.7, 3.8 Hz, 2 H), 3.63 (dd, J = 10.7, 7.7 Hz, 2 H), 2.82 (s, 2 H), 1.84-1. 71 (m, 1 H), 1.42- 1.28 (m, 2 H), 1.24-1. 17 (m, 2 H), 0.91 (t, J = 7. 2 Hz, 3 H) ; MS (ES) m/z : 141 (M+Na+). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
94% | With triethylamine; In dichloromethane; at 0℃; for 2h; | To a solution of E2 (300 mg, 2. 54 mmol) in CH2CI2 (5 mL) at 0C were added Et3N (1.06 mL, 7.62 mmol) and methanesulfonyl chloride (729 mg, 6.36 mmol). The mixture was stirred at 0C for 2 h and diluted with saturated NaHCO3. The organic layer was separated and the aqueous layer was extracted with CH2CI2 (x 3). The combined organic phases were dried, concentrated, and column chromatographed (EtOAc/hexane : 1/1) to provide 655 mg (94%) of E3; 1 H NMR (300 MHz, CDCl3) 8 4.29 (dd, J = 10. 0,4. 3 Hz, 2 H), 4.20 (dd, J = 10. 0,6. 4 Hz, 2 H), 3.05 (s, 6 H), 2.22- 2.15 (m, 1 H), 1.42 (m, 4 H), 0.97-0. 93 (m, 3 H); MS (ES) m/z: 297 (M+Na+). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With p-toluenesulfonic acid monohydrate; In benzene; | EXAMPLE 2 A solution of 2 g of 4-(trans-4-formylcyclohexyl)-3-fluorobenzyl methyl ether (produced analogously to Example 1 (a)-k)) and 1.05 g of <strong>[2612-28-4]2-propyl-1,3-propanediol</strong> in 30 ml of benzene is heated to slight boiling with 35 mg of p-toluenesulfonic acid monohydrate. After neutralization of the solution with a few drops of triethylamine the mixture is washed with water, dried over sodium sulphate, filtered and the filtrate is evaporated. Chromatography of the residue on silica gel with methylene chloride and subsequent crystallization from hexane gives 4-[trans-4-(trans-5-propyl-1,3-dioxan-2-yl)cyclohexyl]-2-fluorobenzyl methyl ether. |