Structure of 174603-37-3
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CAS No. : | 174603-37-3 |
Formula : | C9H6ClFO2 |
M.W : | 200.59 |
SMILES Code : | O=C(O)/C=C/C1=CC=C(F)C=C1Cl |
MDL No. : | MFCD00236027 |
InChI Key : | RJCWBTRMWGOREZ-DUXPYHPUSA-N |
Pubchem ID : | 6257297 |
GHS Pictogram: |
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Signal Word: | Warning |
Hazard Statements: | H315-H319-H335 |
Precautionary Statements: | P261-P280-P305+P351+P338-P304+P340-P405-P501 |
Num. heavy atoms | 13 |
Num. arom. heavy atoms | 6 |
Fraction Csp3 | 0.0 |
Num. rotatable bonds | 2 |
Num. H-bond acceptors | 3.0 |
Num. H-bond donors | 1.0 |
Molar Refractivity | 48.08 |
TPSA ? Topological Polar Surface Area: Calculated from |
37.3 Ų |
Log Po/w (iLOGP)? iLOGP: in-house physics-based method implemented from |
1.63 |
Log Po/w (XLOGP3)? XLOGP3: Atomistic and knowledge-based method calculated by |
2.43 |
Log Po/w (WLOGP)? WLOGP: Atomistic method implemented from |
2.89 |
Log Po/w (MLOGP)? MLOGP: Topological method implemented from |
2.88 |
Log Po/w (SILICOS-IT)? SILICOS-IT: Hybrid fragmental/topological method calculated by |
2.77 |
Consensus Log Po/w? Consensus Log Po/w: Average of all five predictions |
2.52 |
Log S (ESOL):? ESOL: Topological method implemented from |
-2.82 |
Solubility | 0.301 mg/ml ; 0.0015 mol/l |
Class? Solubility class: Log S scale |
Soluble |
Log S (Ali)? Ali: Topological method implemented from |
-2.86 |
Solubility | 0.279 mg/ml ; 0.00139 mol/l |
Class? Solubility class: Log S scale |
Soluble |
Log S (SILICOS-IT)? SILICOS-IT: Fragmental method calculated by |
-2.76 |
Solubility | 0.348 mg/ml ; 0.00173 mol/l |
Class? Solubility class: Log S scale |
Soluble |
GI absorption? Gatrointestinal absorption: according to the white of the BOILED-Egg |
High |
BBB permeant? BBB permeation: according to the yolk of the BOILED-Egg |
Yes |
P-gp substrate? P-glycoprotein substrate: SVM model built on 1033 molecules (training set) |
No |
CYP1A2 inhibitor? Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set) |
No |
CYP2C19 inhibitor? Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set) |
No |
CYP2C9 inhibitor? Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set) |
No |
CYP2D6 inhibitor? Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set) |
No |
CYP3A4 inhibitor? Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set) |
No |
Log Kp (skin permeation)? Skin permeation: QSPR model implemented from |
-5.8 cm/s |
Lipinski? Lipinski (Pfizer) filter: implemented from |
0.0 |
Ghose? Ghose filter: implemented from |
None |
Veber? Veber (GSK) filter: implemented from |
0.0 |
Egan? Egan (Pharmacia) filter: implemented from |
0.0 |
Muegge? Muegge (Bayer) filter: implemented from |
0.0 |
Bioavailability Score? Abbott Bioavailability Score: Probability of F > 10% in rat |
0.56 |
PAINS? Pan Assay Interference Structures: implemented from |
0.0 alert |
Brenk? Structural Alert: implemented from |
1.0 alert: heavy_metal |
Leadlikeness? Leadlikeness: implemented from |
No; 1 violation:MW<1.0 |
Synthetic accessibility? Synthetic accessibility score: from 1 (very easy) to 10 (very difficult) |
2.18 |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
95% | With piperidine; pyridine; at 110℃; for 4h; | The catalyst, piperidine (0.3 mmol), aldehyde (1 mmol) and malonic acid (1 mmol) were suspended in pyridine (2 mL), and the solution was stirred at 100 C. for 4 hours. Then, the reaction mixture was cooled to 0 C., and then it was acidified with HCl solution (conc., 5 mL). By filtering the solid formed finally and drying, I1 was prepared (95%). |
93% | With piperidine; for 4h;Reflux; | General procedure: The suitable aldehyde (10 mmol), malonic acid (30 mmol, 3.12 g) and piperidine (0.5 mL) were dissolved in pyridine (20 mL) and the mixture was heated under reflux for 4 h. The solution was cooled to room temperature and poured in ice-cold aqueous HCl (100 mL,3 M). The white solid precipitate was filtered, washed with water (350 mL), aqueous NaHCO3 (20 mL, 5% w/v), then again with water (250 mL) and dried in an oven (60 C). If required, the crude solid was recrystallysed from EtOH/H2O. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
24.4 g (96%) | With hydrogenchloride; malonic acid; In pyridine; water; | Preparation of 2-Chloro-4-Fluorocinnamic acid To a mixture of 2-chloro-4-fluorobenzaldehyde (20.0 g, 0.13 mol, Aldrich) and malonic acid (26.2 g, 0.25 mol, Aldrich) in pyridine (100 ml) at 50 C. was added dropwise piperidine (10 ml). After 18 h at 70 C., the mixture was poured into an ice cold solution of concentrated HCl (120 ml) and water (1.5 L). The resulting solid was filtered and washed repeatedly with water to give 24.4 g (96%) of 2-chloro-4-fluoro-cinnamic acid as a white solid: Recrystallization of 1.5 g from acetone:water mixtures gave 1.1 g of 2-chloro-4-fluorocinnamic acid as a white solid: mp 243-245 C. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
22.6 g (98%) | In ethanol; | b) Preparation of 3-(2-Chloro-4-fluorophenyl)propanoic Acid A mixture of <strong>[174603-37-3]2-chloro-4-fluorocinnamic acid</strong> (22.9 g, 0.11 mol) and platinum oxide hydrate (0.5 g, EM Scientific) in 95% ethanol (140 ml) was placed on a Parr hydrogenation apparatus. After the appropriate amount of hydrogen was taken up, the catalyst was filtered and the mixture was concentrated in vacuo to give 22.6 g (98%) of 3-(2-chloro-4-fluorophenyl)propanoic acid as a purple solid. This material was used without further purification. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
In trifluoroacetic acid; | Example 15 Solid-Phase Synthesis of Muramyl Dipeptide MDA-205 Solid-phase synthesis strategy was employed. Rink-Amide AM resin (loading 0.88 mmol/g) was chosen, Fmoc-Lys(Boc)-COOH, Fmoc-D-iso-Gln-COOH, Fmoc-Ala-COOH and <strong>[174603-37-3]2-chloro-4-fluorocinnamic acid</strong> were introduced to resin in sequence. After the completion of the condensation, the resin was sufficiently washed and the solvent was drained, and the resin was cleaved for 1 hour in 90% (volume percentage) TFA aqueous solution. The solvent was removed under vacuum, the residue was subjected to a large amount of ether in ice bath, white solid precipitated immediately. The mixture was filtered, and the crude product was obtained with yield of 86%. The crude product was purified by ODS column chromatography, and white solid with a purity of 98.5% was obtained through lypophilization. m.p.=137˜138 C. 1H-NMR (300 MHz, DMSO-d6): 7.55 (1H, dd, J=8.7 and 1.8 Hz, 2-H), 7.77 (1H, m, 5-H), 7.36 (1H, m, 6-H), 7.66 (1H, d, J=15.9 Hz, 7-H), 6.79 (1H, d, J=15.9 Hz, 8-H), 8.47 (1H, d, J=6.6 Hz, 10-H), 4.42 (1H, m, 11-H), 1.27 (3H, d, J=6.9 Hz, 12-H), 8.24 (1H, d, J=8.4 Hz, 14-H), 4.16 (1H, m, 15-H), 7.00 (1H, s, 17-Ha), 7.31 (1H, s, 17-Hb), 1.72 (1H, m, 18-Ha), 1.99 (1H, m, 18-Hb), 2.17 (2H, t, J=7.8 Hz, 19-H), 7.91 (1H, d, J=8.7 Hz, 21-H), 4.13 (1H, m, 22-H), 7.12 (1H, s, 24-Ha), 7.33 (1H, s, 24-HA 1.49 (1H, m, 25-Ha), 1.65 (1H, m, 25-Hb), 1.30 (2H, m, 26-H), 1.52 (2H, m, 27-H), 2.75 (2H, br.s, 28-H), 7.79 (2H, br.s, 29-H). 13C-NMR (125 MHz, DMSO-d6): 162.7 (d, J=250.0 Hz, 1-C), 115.9 (d, J=21.6 Hz, 2-C), 134.6 (d, J=10.0 Hz, 3-C), 129.9 (d, J=3.8 Hz, 4-C), 129.7 (d, J=10.0 Hz, 5-C), 117.7 (d, J=25.1 Hz, 3-C), 137.5 (7-C), 125.4 (8-C), 164.8 (9-C), 49.3 (11-C), 18.6 (12-C), 172.1 (13-C), 52.6 (15-C), 174.2 (16-C), 28.2 (18-C), 32.2 (19-C), 172.1 (20-C), 52.5 (22-C), 173.7 (23-C), 31.8 (25-C), 22.9 (26-C), 27.2 (27-C), 38.2 (28-C). IR: 3279.8 (νOH and νNH), 3066.0 (ν=CH), 2937.1 (ν-CH), 1776.1, 1656.3 (νC=O), 1537.0, 1489.0, 1452.2 (νC=C), 1238.1, 1201.1, 1181.0, 1135.6 (νC-F and δ-CH), 910.6, 835.5, 800.1, 721.3 (νC-Cl and δ=CH). ESI-MS: 527.28 [M+H]+, 1075.00 [2M+Na]+. HR-MS (TOF): 527.2201 [M+H]+, C23H32ClFN6O5. | |
In trifluoroacetic acid; | Example 15 Solid-Phase Synthesis of Muramyl Dipeptide MDA-205 Solid-phase synthesis strategy was employed. Rink-Amide AM resin (loading 0.88 mmol/g) was chosen, Fmoc-Lys(Boc)-COOH, Fmoc-D-iso-Gln-COOH, Fmoc-Ala-COOH and <strong>[174603-37-3]2-chloro-4-fluorocinnamic acid</strong> were introduced to resin in sequence. After the completion of the condensation, the resin was sufficiently washed and the solvent was drained, and the resin was cleaved for 1 hour in 90% (volume percentage) TFA aqueous solution. The solvent was removed under vacuum, the residue was subjected to a large amount of ether in ice bath, white solid precipitated immediately. The mixture was filtered, and the crude product was obtained with yield of 86%. The crude product was purified by ODS column chromatography, and white solid with a purity of 98.5% was obtained through lypophilization. m.p.=137˜138 C. 1H-NMR (300 MHz, DMSO-d6): 7.55 (1H, dd, J=8.7 and 1.8 Hz, 2-H), 7.77 (1H, m, 5-H), 7.36 (1H, m, 6-H), 7.66 (1H, d, J=15.9 Hz, 7-H), 6.79 (1H, d, J=15.9 Hz, 8-H), 8.47 (1H, d, J=6.6 Hz, 10-H), 4.42 (1H, m, 11-H), 1.27 (3H, d, J=6.9 Hz, 12-H), 8.24 (1H, d, J=8.4 Hz, 14-H), 4.16 (1H, m, 15-H), 7.00 (1H, s, 17-Ha), 7.31 (1H, s, 17-Hb), 1.72 (1H, m, 18-Ha), 1.99 (1H, m, 18-Hb), 2.17 (2H, t, J=7.8 Hz, 19-H), 7.91 (1H, d, J=8.7 Hz, 21-H), 4.13 (1H, m, 22-H), 7.12 (1H, s, 24-Ha), 7.33 (1H, s, 24-Hb), 1.49 (1H, m, 25-Ha), 1.65 (1H, m, 25-Hb), 1.30 (2H, m, 26-H), 1.52 (2H, m, 27-H), 2.75 (2H, br.s, 28-H), 7.79 (2H, br.s, 29-H). 13C-NMR (125 MHz, DMSO-d6): 162.7 (d, J=250.0 Hz, 1-C), 115.9 (d, J=21.6 Hz, 2-C), 134.6 (d, J=10.0 Hz, 3-C), 129.9 (d, J=3.8 Hz, 4-C), 129.7 (d. J=10.0 Hz, 5-C), 117.7 (d, J=25.1 Hz, 3-C), 137.5 (7-C), 125.4 (8-C), 164.8 (9-C), 49.3 (11-C), 18.6 (12-C), 172.1 (13-C), 52.6 (15-C), 174.2 (16-C), 28.2 (18-C), 32.2 (19-C), 172.1 (20-C), 52.5 (22-C), 173.7 (23-C), 31.8 (25-C), 22.9 (26-C), 27.2 (27-C), 38.2 (28-C). IR: 3279.8 (νOH and νNH), 3066.0 (ν=CH), 2937.1 (ν-CH), 1776.1, 1656.3 (νC=O), 1537.0, 1489.0, 1452.2 (νC=C), 1238.1, 1201.1, 1181.0, 1135.6 (νC-F and δ-CH), 910.6, 835.5, 800.1, 721.3 (νC-Cl and δ=CH). ESI-MS: 527.28 [M+H]+, 1075.00 [2M+Na]+. HR-MS(TOF): 527.2201 [M+H]+, C23H32ClFN6O5. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With ammonium hydroxide; carbon dioxide; In dimethyl sulfoxide; at 37℃; for 12h;pH 10.0;Enzymatic reaction; | General procedure: The suitable aldehyde 1j-l, 1n or 1o (0.5 mmol), malonic acid (1.0 mmol) and piperidine (0.01 mmol) were dissolved in DMSO (500 mL) and the mixture was heated in a microwave reactor (30 min, 60 C). After cooling, ammonia solution (9.5 mL, 13% w/v,approx. 7 M, adjusted to pH 10.0 by slow addition of dry ice chunks) was added, followed by E. coli BL21(DE3) cells overproducing the required PAL (400 mg wet cell paste). The suspension was stirred at 37 C for several hours, monitoring the conversion by HPLC. For product isolation, the reaction mixture was acidified to pH <2.0 using aqueous H2SO4 (20% w/v) and centrifuged (8000 rpm, 5 min) to remove cells and precipitated unconverted substrate. Dowex 50WX8 hydrogen form resin (5.0 g), packed in a disposable plastic column, was washed with deionised water (20 mL) and aqueous H2SO4 (20 mL, 5% w/v). The supernatant from the biotransformation was loaded onto the resin (1 mL min1). The resin bed was washed with deionised water until the flow-through tested neutral, then the product was eluted with aqueous NH4OH (20 mL, 5% w/v). Fractions containing the product were pooled and dried overnight in a centrifugal evaporator, to afford the corresponding L-phenylalanine L-3j-l, L-3n or L-3o as a white solid. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With oxalyl dichloride; N,N-dimethyl-formamide; In dichloromethane; at 20℃; for 5h;Inert atmosphere; | General procedure: To a solution of cinnamic acid (1a01e24, 1a26e27, 1a29)(1.0 mmol) in dry CH2Cl2 was added oxalyl chloride (5.0 equiv) anda catalytic amount of DMF (0.01 equiv). The reaction mixture wasstirred at room temperature for 5 h before the solvent wasremoved. The residuewas dried under high vacuum and used in thenext step without further purification. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
85% | With trichlorophosphate; at 100℃;Sealed tube; | <strong>[174603-37-3](E)-3-(2-chloro-4-fluorophenyl)acrylic acid</strong> I1 (1 mmol) and 2-(4-bromophenyl)acetohydrazide (1 mmol) were suspended in POCl3 (2 mL), and the mixture was heated by 100 C. overnight. After completion of the reaction, the solvent was evaporated and the residues were cooled down with 2N NaOH. The mixture was extracted with EtOAc and was washed with water. The organic layer was dried with MgSO4 and was concentrated. By purifying the crude residues were purified by column chromatography (n-hexane:ethyl acetate=5:1), I2 of a pale yellow solid was prepared (85%). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With dmap; 1-ethyl-(3-(3-dimethylamino)propyl)-carbodiimide hydrochloride; In dichloromethane; at 35℃;Inert atmosphere; | a: In a 250ml round-bottomed reaction flask, dissolve 2-tert-butyldimethylsilyl-lycorine INB (10.0mmol) and 4-fluoro-2-chlorocinnamic acid (12.0mmol) in 50ml of dichloromethane, at room temperature Under the protection of nitrogen, EDCI.HCl (18.0 mmol) and DMAP (1.0 mmol) were sequentially added.After the addition, the reaction is kept at 35C while stirring. After HPLC tracking detects that the remaining amount of INB is less than 8%, it can be post-processed.The reaction solution was washed with 100 ml of purified water and 100 ml of 10% sodium chloride solution successively, and then concentrated under reduced pressure for later use. |