Structure of 17231-50-4
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The BI-3802 was designed by Boehringer Ingelheim and could be obtained free of charge through the Boehringer Ingelheim open innovation portal opnMe.com, associated with its negative control.
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CAS No. : | 17231-50-4 |
Formula : | C5H3ClN4 |
M.W : | 154.56 |
SMILES Code : | NC1=NC=C(N=C1C#N)Cl |
MDL No. : | MFCD10697784 |
InChI Key : | OKSPUZDERJZNPO-UHFFFAOYSA-N |
Pubchem ID : | 15618941 |
GHS Pictogram: |
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Signal Word: | Warning |
Hazard Statements: | H302-H315-H319-H335 |
Precautionary Statements: | P261-P305+P351+P338 |
Num. heavy atoms | 10 |
Num. arom. heavy atoms | 6 |
Fraction Csp3 | 0.0 |
Num. rotatable bonds | 0 |
Num. H-bond acceptors | 3.0 |
Num. H-bond donors | 1.0 |
Molar Refractivity | 36.16 |
TPSA ? Topological Polar Surface Area: Calculated from |
75.59 Ų |
Log Po/w (iLOGP)? iLOGP: in-house physics-based method implemented from |
0.91 |
Log Po/w (XLOGP3)? XLOGP3: Atomistic and knowledge-based method calculated by |
1.1 |
Log Po/w (WLOGP)? WLOGP: Atomistic method implemented from |
0.59 |
Log Po/w (MLOGP)? MLOGP: Topological method implemented from |
-1.01 |
Log Po/w (SILICOS-IT)? SILICOS-IT: Hybrid fragmental/topological method calculated by |
0.83 |
Consensus Log Po/w? Consensus Log Po/w: Average of all five predictions |
0.48 |
Log S (ESOL):? ESOL: Topological method implemented from |
-1.94 |
Solubility | 1.79 mg/ml ; 0.0116 mol/l |
Class? Solubility class: Log S scale |
Very soluble |
Log S (Ali)? Ali: Topological method implemented from |
-2.28 |
Solubility | 0.811 mg/ml ; 0.00525 mol/l |
Class? Solubility class: Log S scale |
Soluble |
Log S (SILICOS-IT)? SILICOS-IT: Fragmental method calculated by |
-1.98 |
Solubility | 1.62 mg/ml ; 0.0105 mol/l |
Class? Solubility class: Log S scale |
Soluble |
GI absorption? Gatrointestinal absorption: according to the white of the BOILED-Egg |
High |
BBB permeant? BBB permeation: according to the yolk of the BOILED-Egg |
No |
P-gp substrate? P-glycoprotein substrate: SVM model built on 1033 molecules (training set) |
No |
CYP1A2 inhibitor? Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set) |
No |
CYP2C19 inhibitor? Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set) |
No |
CYP2C9 inhibitor? Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set) |
No |
CYP2D6 inhibitor? Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set) |
No |
CYP3A4 inhibitor? Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set) |
No |
Log Kp (skin permeation)? Skin permeation: QSPR model implemented from |
-6.46 cm/s |
Lipinski? Lipinski (Pfizer) filter: implemented from |
0.0 |
Ghose? Ghose filter: implemented from |
None |
Veber? Veber (GSK) filter: implemented from |
0.0 |
Egan? Egan (Pharmacia) filter: implemented from |
0.0 |
Muegge? Muegge (Bayer) filter: implemented from |
1.0 |
Bioavailability Score? Abbott Bioavailability Score: Probability of F > 10% in rat |
0.55 |
PAINS? Pan Assay Interference Structures: implemented from |
0.0 alert |
Brenk? Structural Alert: implemented from |
0.0 alert: heavy_metal |
Leadlikeness? Leadlikeness: implemented from |
No; 1 violation:MW<1.0 |
Synthetic accessibility? Synthetic accessibility score: from 1 (very easy) to 10 (very difficult) |
2.18 |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
85% | With copper(l) iodide; tetrakis(triphenylphosphine) palladium(0); In N,N-dimethyl-formamide; at 120℃; for 10h;Inert atmosphere; | The suspension of 18a (3 g, 14.5 mmol), NaCN (0.85 g, 17.4 mmol), CuI (1.3 g, 7.3 mmol) and Pd(PPh3)4 (0.17 g, 0.15 mmol) were stirred in DMF (40 mL) at 120 C for 10 h under nitrogen protection. After cooling to room temperature, 10% aqueous solution of Na2S2O3(10 mL), water (60 mL) and ethyl acetate (200 mL) were added. The resulting mixture was stirred for 10 min, then filtered, and the filter cake was washed with ethyl acetate (150 mL). The organic layer was separated, washed with water (3 × 50 mL),dried over anhydrous Na2SO4and concentrated. The residue was purified by chromatography on silica gel eluting with PE/EA (10:1-2:1) to give a light-yellow solid (1.9 g, yield 85%). 6-Chloro-3-aminopyrazine-2-carbonitrile (19a) Yield: 85%, light-yellow solid, M.p.: 156-158 C. 1H NMR(400 MHz, CDCl3):delta 8.23 (s, 1H), 5.34 (s, 2H). 13C NMR(100 MHz, CDCl3):delta 154.98, 146.84, 137.41, 114.07,111.16. EI-MS m/z: 154 (M+, Cl35,100), 156 (M+, Cl37,35),127 (M+, Cl35,-H, -CN, 48), 129 (M+, Cl37,-H, -CN, 15). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
81% | With tert.-butylnitrite; titanium tetrachloride; In dichloromethane; at 0 - 20℃; for 3h; | To a solution of 19a (3 g, 20 mmol) in DCM (50 mL) at 0 C was successively added TiCl4(2.2 mL, 20 mmol) and tert-butyl nitrite (7.4 mL, 62 mmol). The reaction mixture was stirred at room temperature for 3 h. When the reaction was completed monitored by TLC, the solvent was evaporated and the residue was treated with water (50 mL) and then extracted with ethyl acetate (2 × 50 mL). The extract was dried over Na2SO4,and concentrated to give 8 as a white solid (2.8 g, yield 81%). 3,6-Dichloropyrazine-2-carbonitrile (8) Yield: 81%, white solid, M.p.: 93-94 C (Lit. 90-91 C,Li 2017). 1H NMR (400 MHz, CDCl3): delta 8.60 (s, 1H). 13CNMR (125 MHz, CDCl3):delta 149.82, 147.65, 147.03, 128.90,112.60. EI-MS m/z: 173 (M+, Cl35,Cl35,100), 175 (M+, Cl35,Cl37,65), 177 (M+, Cl37,Cl37,10). |
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