Structure of 158962-92-6
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The BI-3802 was designed by Boehringer Ingelheim and could be obtained free of charge through the Boehringer Ingelheim open innovation portal opnMe.com, associated with its negative control.
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CAS No. : | 158962-92-6 |
Formula : | C6H6S3 |
M.W : | 174.31 |
SMILES Code : | C1CSC2=CSC=C2S1 |
MDL No. : | MFCD23098725 |
InChI Key : | HPGNGICCHXRMIP-UHFFFAOYSA-N |
Pubchem ID : | 11095132 |
GHS Pictogram: |
![]() |
Signal Word: | Warning |
Hazard Statements: | H302 |
Precautionary Statements: | P280-P305+P351+P338 |
Num. heavy atoms | 9 |
Num. arom. heavy atoms | 5 |
Fraction Csp3 | 0.33 |
Num. rotatable bonds | 0 |
Num. H-bond acceptors | 0.0 |
Num. H-bond donors | 0.0 |
Molar Refractivity | 45.65 |
TPSA ? Topological Polar Surface Area: Calculated from |
78.84 Ų |
Log Po/w (iLOGP)? iLOGP: in-house physics-based method implemented from |
2.16 |
Log Po/w (XLOGP3)? XLOGP3: Atomistic and knowledge-based method calculated by |
2.4 |
Log Po/w (WLOGP)? WLOGP: Atomistic method implemented from |
2.95 |
Log Po/w (MLOGP)? MLOGP: Topological method implemented from |
2.45 |
Log Po/w (SILICOS-IT)? SILICOS-IT: Hybrid fragmental/topological method calculated by |
4.1 |
Consensus Log Po/w? Consensus Log Po/w: Average of all five predictions |
2.81 |
Log S (ESOL):? ESOL: Topological method implemented from |
-2.84 |
Solubility | 0.25 mg/ml ; 0.00143 mol/l |
Class? Solubility class: Log S scale |
Soluble |
Log S (Ali)? Ali: Topological method implemented from |
-3.7 |
Solubility | 0.035 mg/ml ; 0.000201 mol/l |
Class? Solubility class: Log S scale |
Soluble |
Log S (SILICOS-IT)? SILICOS-IT: Fragmental method calculated by |
-2.44 |
Solubility | 0.64 mg/ml ; 0.00367 mol/l |
Class? Solubility class: Log S scale |
Soluble |
GI absorption? Gatrointestinal absorption: according to the white of the BOILED-Egg |
High |
BBB permeant? BBB permeation: according to the yolk of the BOILED-Egg |
Yes |
P-gp substrate? P-glycoprotein substrate: SVM model built on 1033 molecules (training set) |
No |
CYP1A2 inhibitor? Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set) |
Yes |
CYP2C19 inhibitor? Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set) |
No |
CYP2C9 inhibitor? Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set) |
No |
CYP2D6 inhibitor? Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set) |
No |
CYP3A4 inhibitor? Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set) |
No |
Log Kp (skin permeation)? Skin permeation: QSPR model implemented from |
-5.66 cm/s |
Lipinski? Lipinski (Pfizer) filter: implemented from |
0.0 |
Ghose? Ghose filter: implemented from |
None |
Veber? Veber (GSK) filter: implemented from |
0.0 |
Egan? Egan (Pharmacia) filter: implemented from |
0.0 |
Muegge? Muegge (Bayer) filter: implemented from |
1.0 |
Bioavailability Score? Abbott Bioavailability Score: Probability of F > 10% in rat |
0.55 |
PAINS? Pan Assay Interference Structures: implemented from |
0.0 alert |
Brenk? Structural Alert: implemented from |
0.0 alert: heavy_metal |
Leadlikeness? Leadlikeness: implemented from |
No; 1 violation:MW<1.0 |
Synthetic accessibility? Synthetic accessibility score: from 1 (very easy) to 10 (very difficult) |
3.26 |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
35% | n-BuLi (1.6 M in hexane, 9.65 mmol, 6.03 mL) is added dropwise at -78C to a solution of <strong>[158962-92-6]EDTT</strong> (1.6 g, 9.19 mmol) in dry THF under Ar atmosphere. The mixture is stirred for 1 h at -78 C and 1-bromohexane (12 mmol, 1.72 mL) is added dropwise. After 30 min stirring the mixture is allowed to warm slowly to room temperature and stirred for 12 h. After dilution with diethyl ether, the organic phase is washed successively with a saturated NH4Cl and water. After drying over MgSO4 and evaporation of the solvent, the residue is chromatographed on silica gel eluting with 1:2 DCM petroleum ether to afford (0.8 g, 35%) a colorless oil. 1H NMR (300 MHz, CDCl3): 6.78 (s, 1H), 3.19 (s, 4H), 2.68 (t, 2H), 1.64-1.59 (m, 2H), 1.33-1.29 (m, 6), 0.86 (t, 3H) 13C NMR (75 MHz, CDCl3): 137.1, 124.8, 120.6, 114.6, 31.5, 30.2, 28.8, 28.2, 27.8, 27.7, 22.5, 14.0. MS MALDI: 258.1. HRMS: calculated 258.0571; found 258.0574. | |
35% | In a 100 ml flask, n-butil lithium (n-l3uLi) (6.0 ml,1.6 M in hexane, 9.6 mmol) was added, dropwise, at -78 C., to a solution containing <strong>[158962-92-6]3,4-ethylenedithiothiophene</strong> (<strong>[158962-92-6]EDTT</strong>) having formula (19) (1.6 g, 9.19 mmol), dissolved in 40 ml of dry tetrahydrofuran (THF), under argon (Ar) atmosphere. The obtained reaction mixture was stirred for 1 hour, at -78 C. Subsequently, 1 -bromohexane (1.72 ml, 12 mmol) was added, dropwise, at -78C. and the obtainedreaction mixture was stirred, for 30 minutes, at -78 C., and then allowed to warm slowly to room temperature (25 C.) and stirred for additional 12 hours. After dilution with diethyl ether (30 ml), the organic phase was washed with 30 ml of a saturated solution of ammonium chloride (NH4C1), then with water (3x20 ml) and finally was dried over magnesium sulfate (Mg504), at room temperature (25 C.), for 3 hours. The solvent was subsequently evaporated at reduced pressure and the obtained residue was purified by chromatography on silica gel using a mixture of dichloromethane (CH2C12) and petroleum ether (1:2, v/v) as eluent obtaining 0.8 g (35% yield) of 2-n-hexyl-<strong>[158962-92-6]3,4-ethylenedithiothiophene</strong> having formula (20), as a colorless oil, which was characterized by ?H NMR (300 MHz, CDC13) obtaining the following spectrum:6.78 (s, 1H), 3.19 (s, 4H), 2.68 (t, 2H), 1.64-1.59 (m, 2H),1.33-1.29 (m, 6), 0.86 (t, 3H).Said compound having formula (20) was also characterized by ?3C NMR (75 MHz, CDC13) obtaining the following spectrum: 137.1, 124.8, 120.6, 114.6,31.5,30.2,28.8, 28.2, 27.8, 27.7, 22.5, 14.0. Furthermore, said compound having formula (20) was also characterized by mass spectra: MS MALDI and HRMS (ESI) obtaining: [M]: 258.1 and258.0574 (1.16 ppm), respectively; calculated for C,2H,8S3: 258.0571. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
23% | 3,4-Ethylenedithiothiophene (2.0 g, 11.1 mmol) was dissolved in dry THF (40 mL), and a solution of n-BuLi (18 mL, 28 mmol) was added dropwise at -80 C in ca. 15 min. The mixture was allowed to stir for 3 h, after which a PPh2Cl (4.5 mL, 25 mmol) was added dropwise at -80 C. The mixture was gradually brought to room temperature, and stirred for 14 h. The product was extracted with dichloromethane, washed with brine for three times and dried over anhydrous MgSO4. The solvent was concentrated and dissolved in dichloromethane (50 mL) in a flask. The solution was cooled to 0 C and then 30% H2O2 aqueous solution (16 mL) was added to it. The reaction mixture was stirred for 3 h. The product was extracted with dichloromethane and obtained powder was washed with ethyl acetate for several times to afford white powder. |
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