Structure of 150969-56-5
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The BI-3802 was designed by Boehringer Ingelheim and could be obtained free of charge through the Boehringer Ingelheim open innovation portal opnMe.com, associated with its negative control.
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CAS No. : | 150969-56-5 |
Formula : | C10H7F3O |
M.W : | 200.16 |
SMILES Code : | O=C1CCC2=C1C=CC(C(F)(F)F)=C2 |
MDL No. : | MFCD07772122 |
Boiling Point : | No data available |
InChI Key : | AHSXMYSALCGWSP-UHFFFAOYSA-N |
Pubchem ID : | 12174987 |
GHS Pictogram: |
![]() |
Signal Word: | Warning |
Hazard Statements: | H302-H315-H319-H335 |
Precautionary Statements: | P261-P305+P351+P338 |
Num. heavy atoms | 14 |
Num. arom. heavy atoms | 6 |
Fraction Csp3 | 0.3 |
Num. rotatable bonds | 1 |
Num. H-bond acceptors | 4.0 |
Num. H-bond donors | 0.0 |
Molar Refractivity | 44.49 |
TPSA ? Topological Polar Surface Area: Calculated from |
17.07 Ų |
Log Po/w (iLOGP)? iLOGP: in-house physics-based method implemented from |
1.89 |
Log Po/w (XLOGP3)? XLOGP3: Atomistic and knowledge-based method calculated by |
2.55 |
Log Po/w (WLOGP)? WLOGP: Atomistic method implemented from |
3.99 |
Log Po/w (MLOGP)? MLOGP: Topological method implemented from |
2.71 |
Log Po/w (SILICOS-IT)? SILICOS-IT: Hybrid fragmental/topological method calculated by |
3.71 |
Consensus Log Po/w? Consensus Log Po/w: Average of all five predictions |
2.97 |
Log S (ESOL):? ESOL: Topological method implemented from |
-2.94 |
Solubility | 0.231 mg/ml ; 0.00115 mol/l |
Class? Solubility class: Log S scale |
Soluble |
Log S (Ali)? Ali: Topological method implemented from |
-2.56 |
Solubility | 0.557 mg/ml ; 0.00278 mol/l |
Class? Solubility class: Log S scale |
Soluble |
Log S (SILICOS-IT)? SILICOS-IT: Fragmental method calculated by |
-4.01 |
Solubility | 0.0197 mg/ml ; 0.0000984 mol/l |
Class? Solubility class: Log S scale |
Moderately soluble |
GI absorption? Gatrointestinal absorption: according to the white of the BOILED-Egg |
High |
BBB permeant? BBB permeation: according to the yolk of the BOILED-Egg |
Yes |
P-gp substrate? P-glycoprotein substrate: SVM model built on 1033 molecules (training set) |
No |
CYP1A2 inhibitor? Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set) |
Yes |
CYP2C19 inhibitor? Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set) |
No |
CYP2C9 inhibitor? Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set) |
No |
CYP2D6 inhibitor? Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set) |
No |
CYP3A4 inhibitor? Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set) |
No |
Log Kp (skin permeation)? Skin permeation: QSPR model implemented from |
-5.71 cm/s |
Lipinski? Lipinski (Pfizer) filter: implemented from |
0.0 |
Ghose? Ghose filter: implemented from |
None |
Veber? Veber (GSK) filter: implemented from |
0.0 |
Egan? Egan (Pharmacia) filter: implemented from |
0.0 |
Muegge? Muegge (Bayer) filter: implemented from |
1.0 |
Bioavailability Score? Abbott Bioavailability Score: Probability of F > 10% in rat |
0.55 |
PAINS? Pan Assay Interference Structures: implemented from |
0.0 alert |
Brenk? Structural Alert: implemented from |
0.0 alert: heavy_metal |
Leadlikeness? Leadlikeness: implemented from |
No; 1 violation:MW<1.0 |
Synthetic accessibility? Synthetic accessibility score: from 1 (very easy) to 10 (very difficult) |
1.67 |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
37% | With n-butyllithium; In tetrahydrofuran; hexane; at -78℃; | Step E 5-(Trifluoromethyl)indan-1-one To a solution of 3-[2-bromo-5-(trifluoromethyl)phenyl]propanoic acid (2.8 g, 9.4 mmol) in THF (100 mL) and hexane (20 mL) at -78 C. was dropwise added a 2.5 M solution of n-butyllithium in hexane (8.3 mL). After the addition had been completed, the reaction was quenched with saturated NH4Cl. The resulting solution was extracted with ethyl acetate twice. The extracts were washed with saturated NaHCO3, brine, dried over MgSO4 and concentrated. The crude material was purified by flash chromatography on silica eluding with 10-20% EtOAc/hexane to afford the desired product as a white solid (0.7 g, 37%). LC/MS calculated for C10H7F3O: (M+H)+ 201; found, 201.1. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
92% | Step F 5-(Trifluoromethyl)indan-1-ol To a solution of <strong>[150969-56-5]5-(trifluoromethyl)indan-1-one</strong> (0.7 g, 3 mmol) in THF (5 mL) cooled in an ice bath was added sodium borohydride (0.1 g, 3 mmol) followed by MeOH (1 mL). After being stirred for 30 min, the reaction was quenched with aqueous NaHCO3. The resulting solution was extracted with EtOAc twice. The extracts were washed with brine, dried (MgSO4), filtered and, concentrated. The crude material was purified by flash chromatography on silica eluding with 20% EtOAc/hexane to afford the desired product (0.65 g, 92%) as an oil. LC/MS calculated for C10H9F3O: (M+H)+ 203; found 185.1 (M+H-H2O)+. | |
With sodium tetrahydroborate; ethanol; at 0 - 20℃; for 2.0h; | General procedure: To a solution of Compound IB (5.4 g, 1 mmol) in EtOH (40 mL) was added NaBH4 (0.95 g, 25 mmol) at 0 C. The mixture was stirred room temperature for 2 hours, quenched with 1 N HC1 solution (40 mL), and extracted with dichloromethane (30 mL x 3). The combined organic extracts were dried over anhydrous sodium sulfate, filtered, and concentrated to give Compound 1C: LC-MS (ESI) m/z: 201 [M-OH]+. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
19.5% | With 5-ethyl-2-methylpyridine borane complex; acetic acid; In methanol; at 65℃; for 24.0h; | In a 50 mL round-bottom flask, to a solution of 1 equivalent of amine 6 in anhydrous methanol was added 1 equivalent of <strong>[150969-56-5]5-(trifluoromethyl)-2,3-dihydro-1H-inden-1-one</strong> which was subsequently treated with 2 equivalents of acetic acid, followed by 4 equivalents of 5-ethyl-2-methyl-pyridine borane (PEMB). The reaction mixture was heated at 65 C for 24 h. Reaction mixture was monitored by reverse phase UPLC (tR: 0.53) and was carefully quenched with concentrated HCl, then water was added to the reaction mixture and extracted with dichloromethane. The combined organic layer was washed with brine, dried over Na2SO4, and concentrated in vacuo. Reraction mixture was purified by flash chromatography (0-20 % CH2Cl2/MeOH) to afford product 17 (mixture of diastereomers). Further purification by reverse-phase HPLC using a gradient from 1 to 99% mobile phase B (mobile phase A 0.1% HCl in water, mobile phase B 0.1% HCl in CH3CN) resulted in the separation of the two diastereomers 17 a and 17 b as HCl salt. Yield: 17a 19.5%, 96% purity, UPLC-MS: 539; tR: 1.45 min and 17b 8.0%, 83% purity, UPLC-MS: 539; tR: 1.48 min 17a: 1HNMR (400 MHz, CDCl3) delta: 10.09 (s, 1H), 9.24 (s, 1H), 7.85 (d,J 8.0 Hz, 1H), 7.57 (s, 1H), 7.50 (d, J 7.7 Hz, 1H), 7.46-7.38 (m,1H), 7.35 (s, 1H), 7.29-7.20 (m, 1H), 4.90-4.62 (m, 3H), 3.84 (s, 1H),3.68 (t, J 8.7 Hz, 1H), 3.48 (q, J 7.8, 7.0 Hz, 1H), 2.93 (ddt, J 19.3,11.4, 5.0 Hz, 3H), 2.68 (d, J 14.1 Hz, 1H), 2.64-2.37 (m, 3H),2.18-1.97 (m, 3H), 1.92 (dd, J 14.2, 7.4 Hz, 1H), 1.80 (s, 1H), 1.68 (d,J 12.1 Hz, 1H), 0.84 (dd, J 20.0, 6.6 Hz, 6H) ppm. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With N,N,N,N,N,N-hexamethylphosphoric triamide; copper(l) iodide; In N,N-dimethyl-formamide; at 85℃; for 16.0h;Inert atmosphere; | To a mixture of Compound 31B (3.84 g, 14.9 mmol), copper(I) iodide (7.08 g, 37.2 mmol), and hexamethylphosphoramide (5.33 g, 29.8 mmol) in DMF (60 mL) was added methyl 2,2-difluoro-2-(fluorosulfonyl)acetate (11.4 g, 59.6 mmol). The mixture was stirred at 85 C under nitrogen for 16 hours. The mixture was cooled down to room temperature and filtered through Celite. The filtrate was diluted with ethyl acetate (200 mL), washed with brine (100 mL x 3), dried over anhydrous sodium sulfate, filtered, and evaporated to give a crude product, which was purified with flash column chromatography on silica gel (ethyl acetate in petroleum ether, from 0% to 10% v/v) to afford Compound 31C: LC-MS (ESI) m/z: 201 [M+H]+; 1H-NMR (CDCb, 400 MHz): d (ppm) 2.77-2.80 (m, 2H), 3.22 (t, J= 6.0 Hz, 2H), 7.63 (d, J= 8.0 Hz, 1H), 7.77 (s, 1H), 7.86 (d, J= 8.0 Hz, 1H). |
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