Structure of 144851-82-1
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CAS No. : | 144851-82-1 |
Formula : | C8H8FNO2 |
M.W : | 169.15 |
SMILES Code : | NC1=C(C(=O)OC)C=CC=C1F |
MDL No. : | MFCD11870179 |
InChI Key : | ISLOQGNBENYQQF-UHFFFAOYSA-N |
Pubchem ID : | 19432023 |
GHS Pictogram: |
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Signal Word: | Warning |
Hazard Statements: | H302-H315-H319-H332-H335 |
Precautionary Statements: | P261-P280-P305+P351+P338 |
Num. heavy atoms | 12 |
Num. arom. heavy atoms | 6 |
Fraction Csp3 | 0.12 |
Num. rotatable bonds | 2 |
Num. H-bond acceptors | 3.0 |
Num. H-bond donors | 1.0 |
Molar Refractivity | 42.08 |
TPSA ? Topological Polar Surface Area: Calculated from |
52.32 Ų |
Log Po/w (iLOGP)? iLOGP: in-house physics-based method implemented from |
1.89 |
Log Po/w (XLOGP3)? XLOGP3: Atomistic and knowledge-based method calculated by |
1.98 |
Log Po/w (WLOGP)? WLOGP: Atomistic method implemented from |
1.62 |
Log Po/w (MLOGP)? MLOGP: Topological method implemented from |
1.75 |
Log Po/w (SILICOS-IT)? SILICOS-IT: Hybrid fragmental/topological method calculated by |
1.4 |
Consensus Log Po/w? Consensus Log Po/w: Average of all five predictions |
1.73 |
Log S (ESOL):? ESOL: Topological method implemented from |
-2.37 |
Solubility | 0.715 mg/ml ; 0.00423 mol/l |
Class? Solubility class: Log S scale |
Soluble |
Log S (Ali)? Ali: Topological method implemented from |
-2.7 |
Solubility | 0.334 mg/ml ; 0.00197 mol/l |
Class? Solubility class: Log S scale |
Soluble |
Log S (SILICOS-IT)? SILICOS-IT: Fragmental method calculated by |
-2.39 |
Solubility | 0.692 mg/ml ; 0.00409 mol/l |
Class? Solubility class: Log S scale |
Soluble |
GI absorption? Gatrointestinal absorption: according to the white of the BOILED-Egg |
High |
BBB permeant? BBB permeation: according to the yolk of the BOILED-Egg |
Yes |
P-gp substrate? P-glycoprotein substrate: SVM model built on 1033 molecules (training set) |
No |
CYP1A2 inhibitor? Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set) |
No |
CYP2C19 inhibitor? Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set) |
No |
CYP2C9 inhibitor? Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set) |
No |
CYP2D6 inhibitor? Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set) |
No |
CYP3A4 inhibitor? Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set) |
No |
Log Kp (skin permeation)? Skin permeation: QSPR model implemented from |
-5.93 cm/s |
Lipinski? Lipinski (Pfizer) filter: implemented from |
0.0 |
Ghose? Ghose filter: implemented from |
None |
Veber? Veber (GSK) filter: implemented from |
0.0 |
Egan? Egan (Pharmacia) filter: implemented from |
0.0 |
Muegge? Muegge (Bayer) filter: implemented from |
1.0 |
Bioavailability Score? Abbott Bioavailability Score: Probability of F > 10% in rat |
0.55 |
PAINS? Pan Assay Interference Structures: implemented from |
0.0 alert |
Brenk? Structural Alert: implemented from |
1.0 alert: heavy_metal |
Leadlikeness? Leadlikeness: implemented from |
No; 1 violation:MW<1.0 |
Synthetic accessibility? Synthetic accessibility score: from 1 (very easy) to 10 (very difficult) |
1.36 |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
A suspension of methyl triphenylphosphonium bromide (2.4 eq) and sodium amide (3.2 eq) in toluene (0.1 M) was stirred at RT for 3 h. After cooling down to 00C, a solution of Dl in toluene (0.1 M) was added to the suspension and the reaction mixture was heated to 500C for 3 h. 30 min. Then, The precipitate was filtered off and the solvent was evaporated under reduced pressure giving a crude that was purified by flash chromatography on silicagel, using AcOEt/PE (7:3) as solvent, affording the title compound as a yellow powder.1U NMR (500 MHz, CDCl3) delta: 7.78-7.68 (m, 6H), 7.62-7.54 (m, 3H), 7.52-7.45 (m, 7H), 6.97-6.89 (m, IH), 6.56-6.48 (m, IH), 5.76 (bs, 2H), 4.32-4.20 (m, IH). MS (ES) C26H2iFNOP requires: 413, found: 414 (M+H)+. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
80% | With sulfuric acid; for 66h;Heating; | Intermediate 10. A solution of 2-amino-3-fluorobenzoic acid (559 mg, 3.62 mmol) and 1.7 mL of concentrated H2S04 in 11 mL of anhydrous methanol was heated for 66 hours. After cooling to room temperature, methanol was concentrated under reduced pressure. Residue was taken up in 30 mL of water and added to a separatory funnel. Solid sodium carbonate was added slowly until gas evolution ceased (pH 9-10). Aqueous layer was extracted with ethyl acetate (3x40 mL). The combined organic layers were washed with 100 mL sat. NaHC03(aq) and 100 mL of Brine, separated, dried (MgS04), filtered, and concentrated under reduced pressure. Column chromatography (5% Ethyl Acetate in Hexanes) yielded intermediate 10 (491 mg, 80%) as a white solid.1H-NMR (CDC13, 300 MHz): delta 7.66-7.63(m, 1H), 7.15-7.08 (m, 1H), 6.60-6.55 (m, 1H), 5.40 (br s, 2H), 3.89 (s, 3H),LCMS m/z [M+H]+ C8H8FN02 requires: 170.05. Found 170.10 |
80% | With sulfuric acid; for 66h;Heating; | Example 104 Preparation of Intermediate 106 [0808] [0809] A solution of 2-amino-3-fluorobenzoic acid (559 mg, 3.62 mmol) and 1.7 mL of concentrated H2SO4 in 11 mL of anhydrous methanol was heated for 66 hours. After cooling to room temperature, methanol was concentrated under reduced pressure. The residue was taken up in 30 mL of water and added to a separatory funnel. Solid sodium carbonate was added slowly until gas evolution ceased (pH 9-10). The aqueous layer was extracted with ethyl acetate (3×40 mL). The combined organic layers were washed with 100 mL sat. NaHCO300 and 100 mL of brine, separated, dried (MgSO4), filtered, and concentrated under reduced pressure. Column chromatography (5% ethyl acetate in hexanes) yielded intermediate 106 (491 mg, 80%) as a white solid. [0810] 1H-NMR (CDCl3, 300 MHz): delta 7.66-7.63 (m, 1H), 7.15-7.08 (m, 1H), 6.60-6.55 (m, 1H), 5.40 (br s, 2H), 3.89 (s, 3H), [0811] LCMS m/z [M+H]+ C8H8FNO2 requires: 170.05. Found 170.10 |
With hydrogenchloride; for 2h;Heating / reflux; | 2-amino-3-fluoro benzoic acid was dissolved in HCl (3 M solution in MeOH). The reaction mixture was heated to reflux for 2 h. Then, solvent was evaporated and the residue was partitioned between DCM and sat. sol. NaHCO3. The aqueous phase was separated and extracted several times withn DCM. The combined organic layers were dried (Na2SO4) and solvent was evaporated under reduced pressure to afford the title compound as a yellow oil.1H NMR (300 MHz, CDCl3) delta: 7.72-7.58 (m, IH), 7.18-7.02 (m, IH), 6.65-6.48 (m, IH), 3.88 (s, 3H). MS (ES) C8H8FNO2 requires: 169, found: 170 (M+H)+. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
74% | With pyridine; In dichloromethane; at 0 - 20℃; for 40h; | Intermediate 11.To a mixture of <strong>[144851-82-1]methyl 2-amino-3-fluorobenzoate</strong> (intermediate 10) (334 mg, 1.97 mmol) and pyridine (0.41 mL, 4.95 mmol) in 5.5 mL of dichloromethane at 0 C, was added slowly methanesulfonyl chloride (0.40 mL, 4.95 mmol). Mixture was warmed to room temperature and stirred overnight. HPLC indicated -48% conversion to desired product.Pyridine (0.55 mL) and 0.50 mL of methanesulfonyl chloride (approximately 6.8 mmol each) was then added at room temperature. After a total of 40 hours, reaction mixture was quenched with 10 mL of IN HCl. After 5 minutes of stirring, mixture was poured into 20 mL of water. Aqueous layer was extracted with ethyl acetate (3x30 mL). The combined organic layers were washed with 100 mL of IN HCl (aq) and 100 mL Brine, separated, dried (MgS04), filtered, and concentrated under reduced pressure. Column chromatography (15-50% Ethyl Acetate in Hexanes) yielded intermediate 11 (360 mg, 74%) as a white solid.1H-NMR (CDC13, 300 MHz): delta 9.79 (s, 1H), 7.83 (d, J= 7.8 Hz, 1H), 7.35 (m, 1H), 7.19-7.17 (m, 1H), 3.96 (s, 3H), 7.21 3.35 (s, 3H)LCMS m/z [M+H]+ C9Hi0FNO4S requires: 248.03. Found 248.08 |
74% | With pyridine; In dichloromethane; at 0 - 20℃; | Example 105 Preparation of Intermediate 107 [0812] [0813] To a mixture intermediate 106 (334 mg, 1.97 mmol) and pyridine (0.41 mL, 4.95 mmol) in 5.5 mL of dichloromethane at 0 C., was added slowly methanesulfonyl chloride (0.40 mL, 4.95 mmol). The mixture was warmed to room temperature and stirred overnight. HPLC indicated 48% conversion to desired product. Pyridine (0.55 mL) and 0.50 mL of methanesulfonyl chloride (approximately 6.8 mmol each) was then added at room temperature. After a total of 40 hours, reaction mixture was quenched with 10 mL of 1N HCl. After 5 minutes of stirring, mixture was poured into 20 mL of water. The aqueous layer was extracted with ethyl acetate (3×30 mL). The combined organic layers were washed with 100 mL of 1N HCl(aq) and 100 mL brine, separated, dried (MgSO4), filtered, and concentrated under reduced pressure. Column chromatography (15-50% ethyl acetate in hexanes) yielded intermediate 107 (360 mg, 74%) as a white solid. [0814] 1H-NMR (CDCl3, 300 MHz): delta 9.79 (s, 1H), 7.83 (d, J=7.8 Hz, 1H), 7.35 (m, 1H), 7.19-7.17 (m, 1H), 3.96 (s, 3H), 7.21-3.35 (s, 3H) [0815] LCMS m/z [M+H]+ C9H10FNO4S requires: 248.03. Found 248.08 |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
65% | With lithium aluminium tetrahydride; In tetrahydrofuran; at 0℃; | To a suspension of lithium aluminum hydride (1.835 g, 48.3 mmot) in THF (20 mL) was added dropwise at 0 C a solution of <strong>[144851-82-1]methyl 2-amino-3-fluorobenzoate</strong> (90a) (5 g, 32.2 rnmol) in THF (20 inL). The reaction mixture was stirred at room temperature overnight. The mixture was then cooled down to 0 C, quenched with ethyl acetate (30 mL) and water(10 mL). The slurry obtained was filtered through celite and washed with ethyl acetate (50 mL). The aqueous layer was separated and organic layer was dried, filtered and concentrated in vacuum to dryness to give crude product. The crude was purified by flash column chromatography (silica gel 40 g, eluting with 0-100% ethyl acetate in hexane) to furnish (2-Amino-3-fluorophenyl)rnethanol (90b) (2.958 g, 65 % yield) as a tan solid; ?HNMR (300 MHz, DMSO-d) oe 6.98 - 6.86 (in, 2H), 6.52 (td, .1= 7.8, 5.2 Hz, I H), 5.15 0..j= 5.5 Hz, I H), 4.88 (s. 2H), 4.43 (d, J = 5.5 Hz, 2H); ?9F NMR (282 MHz, DMSO-d6) -136.17 (dd,J= 11.3,5.2 Hz); MS (ES+) 165 (M+Na); (ES-) 140.0 (M-l). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
100% | With palladium 10% on activated carbon; hydrogen; In methanol; water; at 20℃; | [0334] To a stirred solution of 3-fluoro-2-nitro-benzoic acid methyl ester (350 mg, 1.75 rnmol) in MeOH (10 mL) was amed Pd/C (35.0 mg, 10%, wet). The suspension was stirred under H2 at room temperature overnight. The reactant was filtered. The filtrate was evaporated in vacuum to afford 2-arnino3-fluoro-benzoic acid methyl ester (300 mg, yield:100%) as a yellow oil, which was used for next step without further purificaiton.[0335] ?I-I NMR (CDCI3, 300 MHz): 6 7.66 (d, 1H), 7.12 (m, 11-1), 6.58 (t, IH), 5.80 (s, 21-1), 3.90 (s, 3H,). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With potassium tert-butylate; bis[2-(diphenylphosphino)phenyl] ether; copper(l) chloride; In toluene; at 22℃; for 20h;Inert atmosphere; Sealed tube; | General procedure: CuCl (1.50 mg, 0.0150 mmol), DPEPhos (8.10 mg, 0.0150 mmol) and KOt-Bu (1.70 mg,0.0150 mmol) were added to a 8 mL vial charged with a magnetic bar. The vial was sealedwith a cap (phenolic open top cap with gray PTFE/silicone) and purged by N2 gas for 5 min.Toluene (0.8 mL) and methyl 2-aminobenzoate (1a) (46.6 L, 0.360 mmol) were added to themixture, which was allowed for 10 min. And then a solution of phenyl vinyl sulfone (2) (50.5mg, 0.300 mmol) in toluene (0.7 mL) was added to the reaction solution. After stirring atroom temperature for 5 h, THF (5 mL) was added and the reaction was allowed to cool to 0C (ice bath). After addition of KOt-Bu (101 mg, 0.900 mmol), the resulting solution wasallowed to stir for further 1 h at 0 C. After that time, the reaction was quenched with asaturated aqueous solution of NH4Cl (1 mL) and NaHCO3 (2 mL) and washed with EtOAc (7x 3 mL). The organic layers were combined, dried over MgSO4, filtered, and concentrated invacuo. The crude product was purified by silica gel column chromatography (CH2Cl2/EtOAc,8:1) to afford the desired product 4a (76.8 mg, 0.267 mmol, 89% yield) as a yellow solid. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With hydrogenchloride; In ethanol; water; at 100℃; | Into a 500mL round bottom flask equipped with a magnetic stir bar was placed methyl 2-amino-6-methoxybenzoate (25 g, 149.6 mmol), ethanol (200 mL), cyanamide (9.43 g, 224 mmol), and concentrated HCl (6 mL). The mixture was allowed to stir at reflux for 6 hours. At one hour intervals, concentrated HCl (0.5 mL) was added. The reaction mixture was allowed to cool to room temperature and the solid, 7i, was isolated via filtration and washed with ethanol. 1H NMR (400 MHz, DMSO-d6) delta ppm 3.88 (s, 3 H), 6.96 (dd, J=8.2, 3.1 Hz, 2 H), 7.69 (t, J=8.3 Hz, 1 H), 8.28 (br. s., 2 H), 12.67 (br. s., 1 H) | |
With hydrogenchloride; In ethanol; water; at 80℃; for 18h; | <strong>[144851-82-1]2-amino-3-fluoro-benzoic acid methyl ester</strong> (15g, 88.68 mmol) was dissolved in EtOH (100 ml_) in a 250ml_ pressure tube, then cyanamide (5.59 g, 133 mmol) and HCI (37% in H2O) were added and the reaction mixture stirred 18h at 80C. Upon cooling, a precipitate formed and isolated by filtration, washed with EtOH and dried in vacuo to afford the title compound as a white powder. Rt: 0.44min., m/z - 180 [M+H], method B. |
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