Structure of 113512-71-3
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CAS No. : | 113512-71-3 |
Formula : | C6H5F2NO |
M.W : | 145.11 |
SMILES Code : | OC1=CC(N)=C(F)C=C1F |
MDL No. : | MFCD04973718 |
InChI Key : | CXADAFQCFSVRGN-UHFFFAOYSA-N |
Pubchem ID : | 2782999 |
GHS Pictogram: |
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Signal Word: | Warning |
Hazard Statements: | H302-H315-H319-H335 |
Precautionary Statements: | P261-P305+P351+P338 |
Num. heavy atoms | 10 |
Num. arom. heavy atoms | 6 |
Fraction Csp3 | 0.0 |
Num. rotatable bonds | 0 |
Num. H-bond acceptors | 3.0 |
Num. H-bond donors | 2.0 |
Molar Refractivity | 32.79 |
TPSA ? Topological Polar Surface Area: Calculated from |
46.25 Ų |
Log Po/w (iLOGP)? iLOGP: in-house physics-based method implemented from |
1.22 |
Log Po/w (XLOGP3)? XLOGP3: Atomistic and knowledge-based method calculated by |
1.09 |
Log Po/w (WLOGP)? WLOGP: Atomistic method implemented from |
2.1 |
Log Po/w (MLOGP)? MLOGP: Topological method implemented from |
1.68 |
Log Po/w (SILICOS-IT)? SILICOS-IT: Hybrid fragmental/topological method calculated by |
1.5 |
Consensus Log Po/w? Consensus Log Po/w: Average of all five predictions |
1.52 |
Log S (ESOL):? ESOL: Topological method implemented from |
-1.87 |
Solubility | 1.96 mg/ml ; 0.0135 mol/l |
Class? Solubility class: Log S scale |
Very soluble |
Log S (Ali)? Ali: Topological method implemented from |
-1.65 |
Solubility | 3.22 mg/ml ; 0.0222 mol/l |
Class? Solubility class: Log S scale |
Very soluble |
Log S (SILICOS-IT)? SILICOS-IT: Fragmental method calculated by |
-2.0 |
Solubility | 1.45 mg/ml ; 0.01 mol/l |
Class? Solubility class: Log S scale |
Soluble |
GI absorption? Gatrointestinal absorption: according to the white of the BOILED-Egg |
High |
BBB permeant? BBB permeation: according to the yolk of the BOILED-Egg |
Yes |
P-gp substrate? P-glycoprotein substrate: SVM model built on 1033 molecules (training set) |
No |
CYP1A2 inhibitor? Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set) |
No |
CYP2C19 inhibitor? Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set) |
No |
CYP2C9 inhibitor? Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set) |
No |
CYP2D6 inhibitor? Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set) |
No |
CYP3A4 inhibitor? Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set) |
No |
Log Kp (skin permeation)? Skin permeation: QSPR model implemented from |
-6.41 cm/s |
Lipinski? Lipinski (Pfizer) filter: implemented from |
0.0 |
Ghose? Ghose filter: implemented from |
None |
Veber? Veber (GSK) filter: implemented from |
0.0 |
Egan? Egan (Pharmacia) filter: implemented from |
0.0 |
Muegge? Muegge (Bayer) filter: implemented from |
1.0 |
Bioavailability Score? Abbott Bioavailability Score: Probability of F > 10% in rat |
0.55 |
PAINS? Pan Assay Interference Structures: implemented from |
0.0 alert |
Brenk? Structural Alert: implemented from |
1.0 alert: heavy_metal |
Leadlikeness? Leadlikeness: implemented from |
No; 1 violation:MW<1.0 |
Synthetic accessibility? Synthetic accessibility score: from 1 (very easy) to 10 (very difficult) |
1.26 |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
91% | With hydrogenchloride; sodium chloride; In pyridine; | (4) 18.9 g (130 mmol) of the above <strong>[113512-71-3]5-amino-2,4-difluorophenol</strong> was dissolved in 45 mL of pyridine, 16.0 mL of pivaloyl chloride was added dropwise under ice-cooling and the mixture was stirred at the same temperature for 30 minutes. 1N hydrochloric acid was added to the reaction solution and the mixture was extracted with ether. The organic layer was washed once with 1N hydrochloric acid, once with water and once with an aqueous saturated solution of sodium chloride and dried over anhydrous magnesium sulfate. The solvent was distilled off under reduced pressure and the residue was triturated with n-hexane to give 27.0 g of 2,4-difluoro-5-pivaloylaminophenol (yield: 91%). NMR (90MHz, CDCl3) delta (ppm) 1.35 (s, 9H), 6.90 (t, 1H, J=10.4Hz), 7.65 (brs, 1H), 7.94 (brs, 1H), 8.24 (dd, 1H, J=9.1, 8.0Hz) MS (M/Z) 229 (M+) Molecular formula C11H13F2NO2=229 |
With hydrogenchloride; In pyridine; | 5-Amino-2,4-difluorophenol (18.9 g, 130 mmol) obtained above was dissolved in pyridine (45mL) and pivaloyl chloride (16.0 mL) was added dropwise to the mixture for 8 minutes under ice-cooling. The reaction mixture was stirred for additional 30 minutes at the same temperature. Hydrochloric acid (1 N) was added to the reaction mixture and the mixture was extracted with ether. The organic layer was washed with 1 N hydrochloric acid, water, and brine once respectively, and dried over anhydrous magnesium sulfate. The solvent was distilled off under reduced pressure and the residue was triturated to give 2,4-difluoro-5-pivaloylaminophenol (27.0 g, yield: 91%). 1H NMR (90 MHz, CDCl3) delta (ppm) 1.35 (s, 9H), 6.90 (t, J = 10.4Hz, 1H), 7.65 (brs, 1H), 7.94 (brs, 1H), 8.24 (dd, J = 9.1, 8.0Hz, 1H) EI-MS (m/e) 229 M+molecular formula C11H13F2NO2= 229 |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
96% | carbon palladium; In nitrogen; ethyl acetate; | (3) 24.9 g (142 mmol) of the above 2,4-difluoro-5-nitrophenol was dissolved in 150 mL of ethyl acetate, 5.0 g of 10% palladium/carbon was added and the mixture was stirred at 50 to 60 C for 27 hours under a stream of hydrogen. The gaseous phase in the reaction vessel was substituted with nitrogen, the reaction solution was filtered by suction and the solvent was distilled off under reduced pressure. The residue was triturated with n-hexane to give 19.8 g of 5-amino-2,4-difluorophenol (yield: 96%). NMR (90MHz, CDCl3) delta (ppm) 4.75 (brs, 2H), 6.37 (t, 1H, J=9.1Hz), 6.87 (t, 1H, J=11.1Hz), 9.21 (s, 1H) MS (M/Z) 145 (M+) Molecular formula C6H5F2NO=145 |
96% | With hydrogen;palladium dihydroxide; In ethyl acetate; for 6h; | To a suspension of 2,4-difluoro-5-nitrophenol (1.01 g, 5.77 mmol) in EtOAc was added palladium hydroxide (0.08 g, 0.57 mmol) and the resulting slurry was stirred under a hydrogen atmosphere for 6 h. The mixture was filtered through a Celite pad, washing with EtOAc (2*10 mL) and the filtrate was concentrated to afford 5-amino-2,4-difluorophenol (0.8 g, 96% yield) as a solid. 1H NMR (400 MHz, DMSO-d6) delta 9.28 (s, 1H), 6.91 (t, J=7.2 Hz, 1H), 6.35 (t, J=8.8 Hz, 1H), 4.84 (brs, 2H); MS (ESI) m/z: 146.0 (M+H+). |
96% | With hydrogen; palladium(II) hydroxide; In ethyl acetate; for 6h; | To a suspension of 2,4-difluoro-5-nitrophenol (1.01 g, 5.77 mmol) in EtOAc was added palladium hydroxide (0.08 g, 0.57 mmol) and the resulting slurry was stirred under a hydrogen atmosphere for 6h. The mixture was filtered through a Celite pad, washing with EtOAc (2x10 mL) and the filtrate was concentrated to afford 5-amino-2,4- difluorophenol (0.8 g, 96% yield) as a solid. FontWeight="Bold" FontSize="10" H NMR (400 MHz, DMSO-i/6) delta 9.28 (s, 1H), 6.91 (t, J = 7.2 Hz, 1H), 6.35 (t, J = 8.8 Hz, 1H), 4.84 (brs, 2H); MS (ESI) m/z: 146.0 (M+H+). |
94.6% | With palladium 10% on activated carbon; hydrogen; In ethyl acetate; at 20℃; for 16h; | To a stirred solution of 2,4- difluoro-5-nitrophenol (1, 25 g, 0.143 mol) in EtOAc (200 mL), 10% Pd/C (4.55 g, 0.043 mol) was added. The reaction mixture was stirred at RT under H2 for 16 h. After the reaction completion (TLC), the reaction mixture was filtered by using celite bed, washed with EtOAc (1000 mL) and concentrated under reduced pressure to afford 5-amino-2,4- difluorophenol (2) as off brown solid (20.10 g, 94.6%); LCMS (ESI positive ion) m/z: calculated: 145.03; observed: 146.2 (M+l). |
palladium on activated carbon; In nitrogen; ethyl acetate; | 2,4-Difluoro-5-nitrophenol (24.9 g, 142 mmol) obtained above was dissolved in ethyl acetate (150 mL) and 10% palladium on activated carbon (5.0 g) was added to the mixture. The reaction mixture was stirred under hydrogen stream at 50 to 60 C for 27 hours. After the atmosphere in reactor was replaced with nitrogen, the reaction mixture was filtrated with suction. The solvent in filtrate was distilled off under reduced pressure, the residue was triturated with hexane to give 5-amino-2,4-difluorophenol (19.8 g, yield: 96%). 1H NMR (90 MHz, CDCl3) delta (ppm) 4.75 (brs, 2H), 6.37 (t, J = 9.1 Hz, 1H), 6.87 (t, J = 11.1 Hz, 1H), 9.21 (s, 1H) EI-MS (m/e) 145 M+molecular formula C6H5F2NO = 145 |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
66% | To a solution of <strong>[113512-71-3]5-amino-2,4-difluorophenol</strong> (0.3 g, 2.07 mmol) in DMSO (2 mL) was added potassium t-butoxide (0.23 g, 2.07 mmol) at RT. After stirring for 1 h, 3,5-dichloropyridine (0.37 g, 2.5 mmol) and potassium carbonate (0.14 g, 1 mmol) were added and the mixture was heated to 190 C. for 1 h in microwave reactor. Water (30 mL) was added, and the product was extracted with EtOAc (2*35 mL) and the combined organic layers were washed with brine solution, dried (Na2SO4), concentrated in vacuo and purified by chromatography (EtOAc/hexane) to afford 5-(5-chloropyridin-3-yloxy)-2,4-difluorobenzenamine (0.35 g, 66% yield) as a solid. 1H NMR (400 MHz, Acetone-d6) delta 8.33-8.30 (m, 2H), 7.44 (t, J=2.4 Hz, 1H), 7.13 (t, J=10.8 Hz, 1H), 6.78 (t, J=8.4 Hz, 1H), 4.85 (brs, 2H); MS (ESI) m/z: 257.0 (M+H+). | |
66% | To a suspension of 2,4-difluoro-5-nitrophenol (1.01 g, 5.77 mmol) in EtOAc was added palladium hydroxide (0.08 g, 0.57 mmol) and the resulting slurry was stirred under a hydrogen atmosphere for 6h. The mixture was filtered through a Celite pad, washing with EtOAc (2x10 mL) and the filtrate was concentrated to afford 5-amino-2,4- difluorophenol (0.8 g, 96% yield) as a solid. FontWeight="Bold" FontSize="10" H NMR (400 MHz, DMSO-i/6) delta 9.28 (s, 1H), 6.91 (t, J = 7.2 Hz, 1H), 6.35 (t, J = 8.8 Hz, 1H), 4.84 (brs, 2H); MS (ESI) m/z: 146.0 (M+H+). [00226] To a solution of <strong>[113512-71-3]5-amino-2,4-difluorophenol</strong> (0.3 g, 2.07 mmol) in DMSO (2 mL) was added potassium t-butoxide (0.23 g, 2.07 mmol) at RT. After stirring for lh, 3,5-dichloropyridine (0.37 g, 2.5 mmol) and potassium carbonate (0.14 g, 1 mmol) were added and the mixture was heated to 190 C for lh in microwave reactor. Water (30 mL) was added, and the product was extracted with EtOAc (2x35 mL) and the combined organic layers were washed with brine solution, dried (Na2SC>4), concentrated in vacuo and purified by chromatography (EtOAc/hexane) to afford 5-(5-chloropyridin-3-yloxy)- 2,4-difluorobenzenamine (0.35 g, 66% yield) as a solid. FontWeight="Bold" FontSize="10" H NMR (400 MHz, Acetone-i 6) delta 8.33 - 8.30 (m, 2H), 7.44 (t, J = 2.4 Hz, 1H), 7.13 (t, J = 10.8 Hz, 1H), 6.78 (t, J = 8.4 Hz, 1H), 4.85 (brs, 2H); MS (ESI) m z: 257.0 (M+H+). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
19.8 g (96%) | The reaction vessel was filled with nitrogen, the reaction solution was filtered by means of suction, the solvent was distilled off under reduced pressure, and the residue was triturated with n-hexane to give 19.8 g (96%) of 5-amino-2,4-difluorophenol. NMR (90 MHz, CDCl3) delta (ppm) 4.75 (2H, brs), 6.37 (1H, t, J=9.1), 6.87 (1H, t, J=11.1), 9.21 (1H, s) MS (M/Z) 145 (M+) | |
Molecular formula C6 H5 F2 NO=145 18.9 g (130 mmol) of the resulting 5-amino-2,4-difluorophenol was dissolved in 45 ml of pyridine, 16.0 ml of pivaloyl chloride was added dropwise over 8 minutes under ice-cooling, and the mixture was stirred at the same temperature for 30 minutes. 1N hydrochloric acid was added to the reaction solution and the mixture was extracted with ether. The organic layer was washed once with a 1N aqueous solution of hydrochloric acid, water and an aqueous saturated solution of sodium chloride, respectively, and dried over magnesium sulfate. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
65% | In isopropyl alcohol; | EXAMPLE 11 4-Chloro-6,7-dimethoxyquinazoline hydrochloride (300 mg, 1.15 mmol), (prepared as described for the starting material in Example 1 but without the aqueous work up), and <strong>[113512-71-3]2,4-difluoro-5-hydroxyaniline</strong> (184 mg, 0.90 mmol) in isopropanol (10 ml) were heated at reflux for 2 hours. The reaction mixture was then allowed to cool, the precipitated product collected by filtration, washed with isopropanol and dried to give 4-(2,4-difluoro-5-hydroxyanilino)-6,7-dimethoxyquinazoline hydrochloride (250 mg, 65%) 1H NMR Spectrum: (DMSOd6) 3.99(s, 6H); 7.05(dd, 1H); 7.17(s, 1H); 7.40(dd, 1H); 8.10(s, 1H); 8.68(s, 1H) MS-ESI: 334 [MH]+ |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
28% | In thionyl chloride; N,N-dimethyl-formamide; | EXAMPLE 12 6-Methoxy-7-(2-methoxyethoxy)-3,4-dihydroquinazolin-4-one (200 mg, 0.8 mmol), (prepared as described for the starting material in Example 9), and DMF (0.1 ml) in thionyl chloride (20 ml) were heated at reflux for 2 hours. Excess thionyl chloride was removed by evaporation and the residue azeotroped with toluene. The residue was dissolved in isopropranol (15 ml), <strong>[113512-71-3]2,4-difluoro-5-hydroxyaniline</strong> (128 mg, 0.88 mmol), (prepared as described for the starting material in Example 11), added, and the mixture heated at reflux for 2 hours. The reaction mixture was then allowed to cool, the precipitated product collected by filtration, washed with isopropanol and dried to give 4-(2,4-difluoro-5-hydroxyanilino)-6-methoxy-7-(2-methoxyethoxy)quinazoline hydrochloride (83 mg, 28%). 1H NMR Spectrum: (DMSOd6) 3.35(s, 3H); 3.77(t, 2H); 4.00(s, 3H); 4.30(t, 2H); 7.10)(dd, 1H); 7.36(s, 1H); 7.40(t, 2H); 8.20(s, 1H); 8.78(d, 2H) MS-ESI: 378 [MH]+ |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
85% | With ammonia; In ethanol; | Concentrated aqueous ammonia (20 ml) was added to a solution of 2,4-difluoro-5-methoxycarbonyloxyaniline (2.0 g, 9.85 mmol) in ethanol (100 ml) and the mixture stirred at ambient temperature for 3 hours. The reaction mixture was diluted with water and most of the organic volatiles were removed by evaporation. The aqueous residue was neutralised to pH7 and extracted with ethyl acetate. The extracts were washed with water, dried (MgSO4) and the solvent removed by evaporation to give 2,4-difluoro-5-hydroxyaniline (1.2 g, 85%). 1H NMR Spectrum: (DMSOd6) 4.78(s, 2H); 6.34(t,1H); 6.87(t, 1H); 9.23(s, 1H) MS-ESI: 145 [MH]+ |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Heating; | General procedure: 4-Chloro-6,7-dimethoxyquinazoline 3 and the required nucleophile were heated in solvent either thermally or using microwave heating until no further reaction was observed. On cooling, the hydrochloride salt was isolated by filtration. Alternative isolation procedures were employed if precipitation did not occur. Additional purification by preparative HPLC or flash column chromatography was employed in some cases. Spectroscopic data for compounds 4 [13], 6-9 [14-16], 20-21 [13], 25 [13], 28 [17] and 30 [18] are in agreement with those reported in the literature. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
68.8 mg | Example 38 4-[(2,4-Difluoro-5-hydroxyphenyl)amino]-5-oxo-6,11-dihydro-5H-pyrido[2,3-b][1,5]benzodiazepine-8-carbonitrile A 1:1 mixture of 4-chloro-5-oxo-6,11-dihydro-5H-pyrido[2,3-b][1,5]benzodiazepine-8-carbonitrile and 4,5-dichloro-11H-pyrido[2,3-b][1,5]benzodiazepine-8-carbonitrile (100 mg, 0.37 mmol) from Intermediate 10A and <strong>[113512-71-3]5-amino-2,4-difluorophenol</strong> (59 mg, 0.41 mmol) was initially charged in 2.0 ml of isopropanol. 102 mul of a 4 M solution of hydrogen chloride in dioxane were added and the mixture was heated in a microwave apparatus to 160 C. for 20 min. Thereafter, the reaction mixture was diluted with 10 ml of water, and 2 drops of saturated aqueous sodium carbonate solution were added. The mixture was left to stir for 10 min, then the precipitate formed was filtered off with suction and washed with acetonitrile. The solids were stirred with acetonitrile and a few drops of methanol, filtered off with suction again and then dried under reduced pressure. 68.8 mg (44% of theory) of the title compound were obtained in 88% purity. LC/MS (Method 5, ESIpos): Rt=0.77 min, m/z=380 [M+H]+. 1H-NMR (400 MHz, DMSO-d6): delta [ppm]=6.33 (d, 1H), 6.91 (t, 1H), 7.26 (d, 1H), 7.34-7.36 (m, 1H), 7.39 (d, 1H), 7.48-7.51 (m, 1H), 7.84 (d, 1H), 9.09 (br. s, 1H), 9.99 (br. s, 1H), 10.08 (br. s, 1H), 10.35 (br. s, 1H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
80.3% | In sulfolane; at 150℃; for 16h;Inert atmosphere; | To a stirred solution of <strong>[113512-71-3]5-amino-2,4-difluorophenol</strong> (2, 20 g, 0.131 mol) in sulfolane (30 mL) bis(2-chloroethyl) amine hydrogen chloride (31 g, 0.170 mol) was added. The resulting mixture was stirred at 150 C under nitrogen atmosphere for 16 h. It was cooled to RT and acetone was added to the crude reaction mixture and stirred at 0 C for 1 h. After 1 h, the precipitated solid was filtered and washed with chilled acetone under nitrogen atmosphere. The solid material was dried under vacuum to afford 2,4-difluoro-5-(piperazin-l-yl)phenol (3) as off white solid (23 g, 80.3%); LCMS (ESI positive ion) m/z: calculated: 214.09; observed: 215.1 (M+l). |