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Structure of 1086429-88-0

Chemical Structure| 1086429-88-0

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Product Details of [ 1086429-88-0 ]

CAS No. :1086429-88-0
Formula : C8H6BrNO
M.W : 212.04
SMILES Code : N#CC1=CC=CC(CO)=C1Br
MDL No. :MFCD18206375
InChI Key :CWLVWDFXEGFJSM-UHFFFAOYSA-N
Pubchem ID :66510837

Safety of [ 1086429-88-0 ]

GHS Pictogram:
Signal Word:Warning
Hazard Statements:H302
Precautionary Statements:P280-P305+P351+P338

Computational Chemistry of [ 1086429-88-0 ] Show Less

Physicochemical Properties

Num. heavy atoms 11
Num. arom. heavy atoms 6
Fraction Csp3 0.12
Num. rotatable bonds 1
Num. H-bond acceptors 2.0
Num. H-bond donors 1.0
Molar Refractivity 44.98
TPSA ?

Topological Polar Surface Area: Calculated from
Ertl P. et al. 2000 J. Med. Chem.

44.02 Ų

Lipophilicity

Log Po/w (iLOGP)?

iLOGP: in-house physics-based method implemented from
Daina A et al. 2014 J. Chem. Inf. Model.

1.75
Log Po/w (XLOGP3)?

XLOGP3: Atomistic and knowledge-based method calculated by
XLOGP program, version 3.2.2, courtesy of CCBG, Shanghai Institute of Organic Chemistry

1.45
Log Po/w (WLOGP)?

WLOGP: Atomistic method implemented from
Wildman SA and Crippen GM. 1999 J. Chem. Inf. Model.

1.66
Log Po/w (MLOGP)?

MLOGP: Topological method implemented from
Moriguchi I. et al. 1992 Chem. Pharm. Bull.
Moriguchi I. et al. 1994 Chem. Pharm. Bull.
Lipinski PA. et al. 2001 Adv. Drug. Deliv. Rev.

1.59
Log Po/w (SILICOS-IT)?

SILICOS-IT: Hybrid fragmental/topological method calculated by
FILTER-IT program, version 1.0.2, courtesy of SILICOS-IT, http://www.silicos-it.com

2.32
Consensus Log Po/w?

Consensus Log Po/w: Average of all five predictions

1.75

Water Solubility

Log S (ESOL):?

ESOL: Topological method implemented from
Delaney JS. 2004 J. Chem. Inf. Model.

-2.41
Solubility 0.833 mg/ml ; 0.00393 mol/l
Class?

Solubility class: Log S scale
Insoluble < -10 < Poorly < -6 < Moderately < -4 < Soluble < -2 Very < 0 < Highly

Soluble
Log S (Ali)?

Ali: Topological method implemented from
Ali J. et al. 2012 J. Chem. Inf. Model.

-1.98
Solubility 2.22 mg/ml ; 0.0105 mol/l
Class?

Solubility class: Log S scale
Insoluble < -10 < Poorly < -6 < Moderately < -4 < Soluble < -2 Very < 0 < Highly

Very soluble
Log S (SILICOS-IT)?

SILICOS-IT: Fragmental method calculated by
FILTER-IT program, version 1.0.2, courtesy of SILICOS-IT, http://www.silicos-it.com

-3.17
Solubility 0.143 mg/ml ; 0.000673 mol/l
Class?

Solubility class: Log S scale
Insoluble < -10 < Poorly < -6 < Moderately < -4 < Soluble < -2 Very < 0 < Highly

Soluble

Pharmacokinetics

GI absorption?

Gatrointestinal absorption: according to the white of the BOILED-Egg

High
BBB permeant?

BBB permeation: according to the yolk of the BOILED-Egg

Yes
P-gp substrate?

P-glycoprotein substrate: SVM model built on 1033 molecules (training set)
and tested on 415 molecules (test set)
10-fold CV: ACC=0.72 / AUC=0.77
External: ACC=0.88 / AUC=0.94

No
CYP1A2 inhibitor?

Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set)
and tested on 3000 molecules (test set)
10-fold CV: ACC=0.83 / AUC=0.90
External: ACC=0.84 / AUC=0.91

Yes
CYP2C19 inhibitor?

Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set)
and tested on 3000 molecules (test set)
10-fold CV: ACC=0.80 / AUC=0.86
External: ACC=0.80 / AUC=0.87

No
CYP2C9 inhibitor?

Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set)
and tested on 2075 molecules (test set)
10-fold CV: ACC=0.78 / AUC=0.85
External: ACC=0.71 / AUC=0.81

No
CYP2D6 inhibitor?

Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set)
and tested on 1068 molecules (test set)
10-fold CV: ACC=0.79 / AUC=0.85
External: ACC=0.81 / AUC=0.87

No
CYP3A4 inhibitor?

Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set)
and tested on 2579 molecules (test set)
10-fold CV: ACC=0.77 / AUC=0.85
External: ACC=0.78 / AUC=0.86

No
Log Kp (skin permeation)?

Skin permeation: QSPR model implemented from
Potts RO and Guy RH. 1992 Pharm. Res.

-6.56 cm/s

Druglikeness

Lipinski?

Lipinski (Pfizer) filter: implemented from
Lipinski CA. et al. 2001 Adv. Drug Deliv. Rev.
MW ≤ 500
MLOGP ≤ 4.15
N or O ≤ 10
NH or OH ≤ 5

0.0
Ghose?

Ghose filter: implemented from
Ghose AK. et al. 1999 J. Comb. Chem.
160 ≤ MW ≤ 480
-0.4 ≤ WLOGP ≤ 5.6
40 ≤ MR ≤ 130
20 ≤ atoms ≤ 70

None
Veber?

Veber (GSK) filter: implemented from
Veber DF. et al. 2002 J. Med. Chem.
Rotatable bonds ≤ 10
TPSA ≤ 140

0.0
Egan?

Egan (Pharmacia) filter: implemented from
Egan WJ. et al. 2000 J. Med. Chem.
WLOGP ≤ 5.88
TPSA ≤ 131.6

0.0
Muegge?

Muegge (Bayer) filter: implemented from
Muegge I. et al. 2001 J. Med. Chem.
200 ≤ MW ≤ 600
-2 ≤ XLOGP ≤ 5
TPSA ≤ 150
Num. rings ≤ 7
Num. carbon > 4
Num. heteroatoms > 1
Num. rotatable bonds ≤ 15
H-bond acc. ≤ 10
H-bond don. ≤ 5

0.0
Bioavailability Score?

Abbott Bioavailability Score: Probability of F > 10% in rat
implemented from
Martin YC. 2005 J. Med. Chem.

0.55

Medicinal Chemistry

PAINS?

Pan Assay Interference Structures: implemented from
Baell JB. & Holloway GA. 2010 J. Med. Chem.

0.0 alert
Brenk?

Structural Alert: implemented from
Brenk R. et al. 2008 ChemMedChem

0.0 alert: heavy_metal
Leadlikeness?

Leadlikeness: implemented from
Teague SJ. 1999 Angew. Chem. Int. Ed.
250 ≤ MW ≤ 350
XLOGP ≤ 3.5
Num. rotatable bonds ≤ 7

No; 1 violation:MW<1.0
Synthetic accessibility?

Synthetic accessibility score: from 1 (very easy) to 10 (very difficult)
based on 1024 fragmental contributions (FP2) modulated by size and complexity penaties,
trained on 12'782'590 molecules and tested on 40 external molecules (r2 = 0.94)

1.69

Application In Synthesis of [ 1086429-88-0 ]

* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.

  • Downstream synthetic route of [ 1086429-88-0 ]

[ 1086429-88-0 ] Synthesis Path-Downstream   1~19

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YieldReaction ConditionsOperation in experiment
84.2% With silica gel; pyridinium chlorochromate; In dichloromethane; at 20℃; for 2.0h; General procedure: To the solution of 23 (26.0 g, 0.103 mol) in THF/MeOH/H2O (55:50:100 mL) was added LiOH?H2O (17.3 g, 0.411 mol, 4 equiv). The mixture was stirred for 1 h and concentrated. DCM was added. The organic layer was washed with 1 N HCl, saturated NaHCO3, brine, dried over anhydrous Na2SO4, filtered and concentrated. The residue was washed with PE to give the product 51 (16.2 g, yield 80%). To the mixture of 51 (14.2 g, 67 mmol) and silica gel (14.2 g) in DCM (268 mL) was added PCC (21.6 g, 0.1005 mol, 1.5 equiv). The mixture was stirred for 2 h. The reaction mixture was filtered and the filtrate was concentrated. The residue was purified by silica gel chromatography to give the desired product 52 (11.8 g, 84.2%) as a solid. To the solution of 52 in DMSO (75 mL) were added Ph3PCH2OMe chloride (29.4 g, 3.6 equiv) in DMSO (75 ml) and t-BuOK (9 g, 3.4 equiv) in one portion. The mixture was stirred for 1 h at rt and 52 (5 g, 1 equiv) in DMSO (50 mL) was added in one portion at 0 C, and then stirred overnight. The reaction solution was poured into water, extracted with EA, washed with brine, dried over Na2SO4, filtered and evaporated. The residue was purified by silica gel column to give 53 (4.1 g, yield 72%) as a yellow solid. TLC (silica gel plate, PE/EA = 10:1): Rf = 0.45. To the solution of 53 (2 g, 8.37 mmol) in THF (42 mL) was added HCl (6 N, 14 mL) at rt and the reaction was refluxed for 1 h. The reaction was cooled, poured into water, extracted with EA, washed with water, brine, dried over anhydrous Na2SO4 and evaporated to give 54 (2.54 g) as crude oil. TLC (silica gel plate, PE/EA = 10:1): Rf = 0.2. To the solution of 54 (2.54 g) in methanol (20 mL) was added NaBH4 (319 mg, 1 equiv) in portions for 10 min. The solution was stirred for 1 hand water (50 mL) was added for 10 min. The solution was extracted with EA, washed with water, dried over Na2SO4 and evaporated to give 55 (2.41 g) as crude oil. TLC (silica gel plate, PE/EA = 3:1): Rf = 0.3. To the solution of 55 (2.41 g) and Et3N (1.2 g, 1.1 equiv) in DCM (35 mL) was added acetyl chloride (0.84 g, 1 equiv) dropwise at 0 C. The reaction wasstirred at 0-C for 2 hand water (50 mL) was added to the reaction solution. The solution was extracted with EA and the organic layer was washed with brine, dried over anhydrous Na2SO4 andevaporated. The residue was purified by silica gel column (PE/EA = 10:1) to give the product 56 (2.2 g, 98% of three steps). 1HNMR(300 MHz, CDCl3): delta 7.57 (d, 1H), 7.48 (d, 1H), 7.37 (t, 1H), 4.32 (t, 2H), 3.15 (t, 2H), 2.03 (s, 1H) ppm. To the mixture of 56 (1 g), pin2B2 (1.04 g, 1.1 equiv) and KOAc (0.73 g, 2 equiv) in 1,4-dioxane (20 mL) was added Pd(dppf)Cl2 (100 mg, 5% equiv) under N2. The reaction was refluxed for 2 h. The reaction solution was cooled to rt, poured into water (50 mL) and extracted with EA. The organic phase was washed with water, brine, dried over anhydrous Na2SO2 and concentrated. The residue was purified by silica gel column (PE/EA = 10:1) to give 57 (0.9 g) as a colorless oil. TLC (silica gel plate, PE/EA = 3:1): Rf = 0.7. To the solution of 57 (1 g) in MeOH (20 mL) was added NaOH (0.254 g, 2 equiv) in one portion at 0 C. The reaction solution was stirred at rt for1 h. MeOH was rotary evaporated to give a residue that was mixed with HCl (6 N, 1.1 mL). The reaction was stirred overnight, quenched with NaOH (1 N, 10 mL), washed with EA. The aqueous phase was acidified with HCl (1 N) to pH 1-2 and extracted with EA. The combined organic layer was washed with brine, dried over Na2SO4, and evaporated to give 58 (540 mg, yield 51%) as a white solid. 1H NMR (300 MHz, DMSO-d6): delta 8.84 (s, 1H), 7.67 (d, 1H), 7.54 (m, 2H), 4.07 (t, 2H), 2.94 (t,2H). MS: m/z = 174 (M+1, ESI+). To the solution of 58 (540 mg, 3.12 mmol) in HCOOH/water (5.4:0.54 mL) was added Raney Ni. The reaction was stirred at 100 C for 1 h, cooled to rt, quenched with water and extracted with EA. The organic phase was washed with water, brine, dried over Na2SO4, and concentrated. The residue was purified by silica gel column (PE/EA = 3:1) to give 59 (460 mg, 85%) as a white solid. 1H NMR (300 MHz, DMSO-d6): delta 10.69 (s, 1H), 9.01 (s, 1H), 7.74 (q, 1H), 7.54 (m, 2H), 4.09 (t, 2H), 2.96 (t, 1H) ppm. MS:m/z = 177(M+1, ESI+). To the solution of Ph3PCH2COOCH2CH3 bromide in THF (6 mL) was added NaH (60%, 68 mg, 3 equiv). The reaction was stirred under N2 for 1 h at rt. Compound 59 (100 mg, 1 equiv) in THF (2 mL) was added in one portion at 0 C. The mixture was stirred overnight, quenched with water (10 mL) and HCl (1 N 10 mL), extracted with EA. The organic phase was washed with brine, dried over Na2SO4 and concentrated. The residue was purified by silica gel column (PE/EA = 10:1-3:1) to give 60 (140 mg, yield 98%) as a white solid. 1H NMR (300 MHz, DMSO-d6): delta 8.73 (s, 1H), 8.70 (d, 1H), 7.70 (d, 1H), 7.42 (t, 1H), 7.26 (d, 1H), 6.45 (d, 1H) 4.30 (q, 2H), 4.03 (t, 2H), 2.89 (t, 2H), 1.20 (t, 3H) ppm. MS: m/z = 255 (M+23, ESI+). T...
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  • C15H20BNO3 [ No CAS ]
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YieldReaction ConditionsOperation in experiment
80% With lithium hydroxide; In tetrahydrofuran; methanol; water; at 20℃; for 1.0h; General procedure: To the solution of 23 (26.0 g, 0.103 mol) in THF/MeOH/H2O (55:50:100 mL) was added LiOH?H2O (17.3 g, 0.411 mol, 4 equiv). The mixture was stirred for 1 h and concentrated. DCM was added. The organic layer was washed with 1 N HCl, saturated NaHCO3, brine, dried over anhydrous Na2SO4, filtered and concentrated. The residue was washed with PE to give the product 51 (16.2 g, yield 80%). To the mixture of 51 (14.2 g, 67 mmol) and silica gel (14.2 g) in DCM (268 mL) was added PCC (21.6 g, 0.1005 mol, 1.5 equiv). The mixture was stirred for 2 h. The reaction mixture was filtered and the filtrate was concentrated. The residue was purified by silica gel chromatography to give the desired product 52 (11.8 g, 84.2%) as a solid. To the solution of 52 in DMSO (75 mL) were added Ph3PCH2OMe chloride (29.4 g, 3.6 equiv) in DMSO (75 ml) and t-BuOK (9 g, 3.4 equiv) in one portion. The mixture was stirred for 1 h at rt and 52 (5 g, 1 equiv) in DMSO (50 mL) was added in one portion at 0 C, and then stirred overnight. The reaction solution was poured into water, extracted with EA, washed with brine, dried over Na2SO4, filtered and evaporated. The residue was purified by silica gel column to give 53 (4.1 g, yield 72%) as a yellow solid. TLC (silica gel plate, PE/EA = 10:1): Rf = 0.45. To the solution of 53 (2 g, 8.37 mmol) in THF (42 mL) was added HCl (6 N, 14 mL) at rt and the reaction was refluxed for 1 h. The reaction was cooled, poured into water, extracted with EA, washed with water, brine, dried over anhydrous Na2SO4 and evaporated to give 54 (2.54 g) as crude oil. TLC (silica gel plate, PE/EA = 10:1): Rf = 0.2. To the solution of 54 (2.54 g) in methanol (20 mL) was added NaBH4 (319 mg, 1 equiv) in portions for 10 min. The solution was stirred for 1 hand water (50 mL) was added for 10 min. The solution was extracted with EA, washed with water, dried over Na2SO4 and evaporated to give 55 (2.41 g) as crude oil. TLC (silica gel plate, PE/EA = 3:1): Rf = 0.3. To the solution of 55 (2.41 g) and Et3N (1.2 g, 1.1 equiv) in DCM (35 mL) was added acetyl chloride (0.84 g, 1 equiv) dropwise at 0 C. The reaction wasstirred at 0-C for 2 hand water (50 mL) was added to the reaction solution. The solution was extracted with EA and the organic layer was washed with brine, dried over anhydrous Na2SO4 andevaporated. The residue was purified by silica gel column (PE/EA = 10:1) to give the product 56 (2.2 g, 98% of three steps). 1HNMR(300 MHz, CDCl3): delta 7.57 (d, 1H), 7.48 (d, 1H), 7.37 (t, 1H), 4.32 (t, 2H), 3.15 (t, 2H), 2.03 (s, 1H) ppm. To the mixture of 56 (1 g), pin2B2 (1.04 g, 1.1 equiv) and KOAc (0.73 g, 2 equiv) in 1,4-dioxane (20 mL) was added Pd(dppf)Cl2 (100 mg, 5% equiv) under N2. The reaction was refluxed for 2 h. The reaction solution was cooled to rt, poured into water (50 mL) and extracted with EA. The organic phase was washed with water, brine, dried over anhydrous Na2SO2 and concentrated. The residue was purified by silica gel column (PE/EA = 10:1) to give 57 (0.9 g) as a colorless oil. TLC (silica gel plate, PE/EA = 3:1): Rf = 0.7. To the solution of 57 (1 g) in MeOH (20 mL) was added NaOH (0.254 g, 2 equiv) in one portion at 0 C. The reaction solution was stirred at rt for1 h. MeOH was rotary evaporated to give a residue that was mixed with HCl (6 N, 1.1 mL). The reaction was stirred overnight, quenched with NaOH (1 N, 10 mL), washed with EA. The aqueous phase was acidified with HCl (1 N) to pH 1-2 and extracted with EA. The combined organic layer was washed with brine, dried over Na2SO4, and evaporated to give 58 (540 mg, yield 51%) as a white solid. 1H NMR (300 MHz, DMSO-d6): delta 8.84 (s, 1H), 7.67 (d, 1H), 7.54 (m, 2H), 4.07 (t, 2H), 2.94 (t,2H). MS: m/z = 174 (M+1, ESI+). To the solution of 58 (540 mg, 3.12 mmol) in HCOOH/water (5.4:0.54 mL) was added Raney Ni. The reaction was stirred at 100 C for 1 h, cooled to rt, quenched with water and extracted with EA. The organic phase was washed with water, brine, dried over Na2SO4, and concentrated. The residue was purified by silica gel column (PE/EA = 3:1) to give 59 (460 mg, 85%) as a white solid. 1H NMR (300 MHz, DMSO-d6): delta 10.69 (s, 1H), 9.01 (s, 1H), 7.74 (q, 1H), 7.54 (m, 2H), 4.09 (t, 2H), 2.96 (t, 1H) ppm. MS:m/z = 177(M+1, ESI+). To the solution of Ph3PCH2COOCH2CH3 bromide in THF (6 mL) was added NaH (60%, 68 mg, 3 equiv). The reaction was stirred under N2 for 1 h at rt. Compound 59 (100 mg, 1 equiv) in THF (2 mL) was added in one portion at 0 C. The mixture was stirred overnight, quenched with water (10 mL) and HCl (1 N 10 mL), extracted with EA. The organic phase was washed with brine, dried over Na2SO4 and concentrated. The residue was purified by silica gel column (PE/EA = 10:1-3:1) to give 60 (140 mg, yield 98%) as a white solid. 1H NMR (300 MHz, DMSO-d6): delta 8.73 (s, 1H), 8.70 (d, 1H), 7.70 (d, 1H), 7.42 (t, 1H), 7.26 (d, 1H), 6.45 (d, 1H) 4.30 (q, 2H), 4.03 (t, 2H), 2.89 (t, 2H), 1.20 (t, 3H) ppm. MS: m/z = 255 (M+23, ESI+). T...
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  • C12H13BrO4 [ No CAS ]
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  • [ 101421-85-6 ]
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  • [ 263159-64-4 ]
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