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Chemical Structure| 103831-11-4 Chemical Structure| 103831-11-4

Structure of 103831-11-4

Chemical Structure| 103831-11-4

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Product Details of [ 103831-11-4 ]

CAS No. :103831-11-4
Formula : C4H12Cl2N2
M.W : 159.06
SMILES Code : NC1CNCC1.[H]Cl.[H]Cl
MDL No. :MFCD00059018
InChI Key :NJPNCMOUEXEGBL-UHFFFAOYSA-N
Pubchem ID :16212596

Safety of [ 103831-11-4 ]

GHS Pictogram:
Signal Word:Warning
Hazard Statements:H315-H319-H335
Precautionary Statements:P261-P305+P351+P338

Computational Chemistry of [ 103831-11-4 ] Show Less

Physicochemical Properties

Num. heavy atoms 8
Num. arom. heavy atoms 0
Fraction Csp3 1.0
Num. rotatable bonds 0
Num. H-bond acceptors 2.0
Num. H-bond donors 2.0
Molar Refractivity 42.58
TPSA ?

Topological Polar Surface Area: Calculated from
Ertl P. et al. 2000 J. Med. Chem.

38.05 Ų

Lipophilicity

Log Po/w (iLOGP)?

iLOGP: in-house physics-based method implemented from
Daina A et al. 2014 J. Chem. Inf. Model.

0.0
Log Po/w (XLOGP3)?

XLOGP3: Atomistic and knowledge-based method calculated by
XLOGP program, version 3.2.2, courtesy of CCBG, Shanghai Institute of Organic Chemistry

0.66
Log Po/w (WLOGP)?

WLOGP: Atomistic method implemented from
Wildman SA and Crippen GM. 1999 J. Chem. Inf. Model.

0.53
Log Po/w (MLOGP)?

MLOGP: Topological method implemented from
Moriguchi I. et al. 1992 Chem. Pharm. Bull.
Moriguchi I. et al. 1994 Chem. Pharm. Bull.
Lipinski PA. et al. 2001 Adv. Drug. Deliv. Rev.

0.21
Log Po/w (SILICOS-IT)?

SILICOS-IT: Hybrid fragmental/topological method calculated by
FILTER-IT program, version 1.0.2, courtesy of SILICOS-IT, http://www.silicos-it.com

0.28
Consensus Log Po/w?

Consensus Log Po/w: Average of all five predictions

0.34

Water Solubility

Log S (ESOL):?

ESOL: Topological method implemented from
Delaney JS. 2004 J. Chem. Inf. Model.

-1.24
Solubility 9.11 mg/ml ; 0.0573 mol/l
Class?

Solubility class: Log S scale
Insoluble < -10 < Poorly < -6 < Moderately < -4 < Soluble < -2 Very < 0 < Highly

Very soluble
Log S (Ali)?

Ali: Topological method implemented from
Ali J. et al. 2012 J. Chem. Inf. Model.

-1.04
Solubility 14.7 mg/ml ; 0.0922 mol/l
Class?

Solubility class: Log S scale
Insoluble < -10 < Poorly < -6 < Moderately < -4 < Soluble < -2 Very < 0 < Highly

Very soluble
Log S (SILICOS-IT)?

SILICOS-IT: Fragmental method calculated by
FILTER-IT program, version 1.0.2, courtesy of SILICOS-IT, http://www.silicos-it.com

-0.34
Solubility 71.9 mg/ml ; 0.452 mol/l
Class?

Solubility class: Log S scale
Insoluble < -10 < Poorly < -6 < Moderately < -4 < Soluble < -2 Very < 0 < Highly

Soluble

Pharmacokinetics

GI absorption?

Gatrointestinal absorption: according to the white of the BOILED-Egg

High
BBB permeant?

BBB permeation: according to the yolk of the BOILED-Egg

Yes
P-gp substrate?

P-glycoprotein substrate: SVM model built on 1033 molecules (training set)
and tested on 415 molecules (test set)
10-fold CV: ACC=0.72 / AUC=0.77
External: ACC=0.88 / AUC=0.94

No
CYP1A2 inhibitor?

Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set)
and tested on 3000 molecules (test set)
10-fold CV: ACC=0.83 / AUC=0.90
External: ACC=0.84 / AUC=0.91

No
CYP2C19 inhibitor?

Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set)
and tested on 3000 molecules (test set)
10-fold CV: ACC=0.80 / AUC=0.86
External: ACC=0.80 / AUC=0.87

No
CYP2C9 inhibitor?

Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set)
and tested on 2075 molecules (test set)
10-fold CV: ACC=0.78 / AUC=0.85
External: ACC=0.71 / AUC=0.81

No
CYP2D6 inhibitor?

Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set)
and tested on 1068 molecules (test set)
10-fold CV: ACC=0.79 / AUC=0.85
External: ACC=0.81 / AUC=0.87

No
CYP3A4 inhibitor?

Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set)
and tested on 2579 molecules (test set)
10-fold CV: ACC=0.77 / AUC=0.85
External: ACC=0.78 / AUC=0.86

Yes
Log Kp (skin permeation)?

Skin permeation: QSPR model implemented from
Potts RO and Guy RH. 1992 Pharm. Res.

-6.8 cm/s

Druglikeness

Lipinski?

Lipinski (Pfizer) filter: implemented from
Lipinski CA. et al. 2001 Adv. Drug Deliv. Rev.
MW ≤ 500
MLOGP ≤ 4.15
N or O ≤ 10
NH or OH ≤ 5

0.0
Ghose?

Ghose filter: implemented from
Ghose AK. et al. 1999 J. Comb. Chem.
160 ≤ MW ≤ 480
-0.4 ≤ WLOGP ≤ 5.6
40 ≤ MR ≤ 130
20 ≤ atoms ≤ 70

None
Veber?

Veber (GSK) filter: implemented from
Veber DF. et al. 2002 J. Med. Chem.
Rotatable bonds ≤ 10
TPSA ≤ 140

0.0
Egan?

Egan (Pharmacia) filter: implemented from
Egan WJ. et al. 2000 J. Med. Chem.
WLOGP ≤ 5.88
TPSA ≤ 131.6

0.0
Muegge?

Muegge (Bayer) filter: implemented from
Muegge I. et al. 2001 J. Med. Chem.
200 ≤ MW ≤ 600
-2 ≤ XLOGP ≤ 5
TPSA ≤ 150
Num. rings ≤ 7
Num. carbon > 4
Num. heteroatoms > 1
Num. rotatable bonds ≤ 15
H-bond acc. ≤ 10
H-bond don. ≤ 5

2.0
Bioavailability Score?

Abbott Bioavailability Score: Probability of F > 10% in rat
implemented from
Martin YC. 2005 J. Med. Chem.

0.55

Medicinal Chemistry

PAINS?

Pan Assay Interference Structures: implemented from
Baell JB. & Holloway GA. 2010 J. Med. Chem.

0.0 alert
Brenk?

Structural Alert: implemented from
Brenk R. et al. 2008 ChemMedChem

0.0 alert: heavy_metal
Leadlikeness?

Leadlikeness: implemented from
Teague SJ. 1999 Angew. Chem. Int. Ed.
250 ≤ MW ≤ 350
XLOGP ≤ 3.5
Num. rotatable bonds ≤ 7

No; 1 violation:MW<1.0
Synthetic accessibility?

Synthetic accessibility score: from 1 (very easy) to 10 (very difficult)
based on 1024 fragmental contributions (FP2) modulated by size and complexity penaties,
trained on 12'782'590 molecules and tested on 40 external molecules (r2 = 0.94)

1.45

Application In Synthesis of [ 103831-11-4 ]

* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.

  • Downstream synthetic route of [ 103831-11-4 ]

[ 103831-11-4 ] Synthesis Path-Downstream   1~28

  • 1
  • [ 96568-07-9 ]
  • [ 103831-11-4 ]
  • [ 96568-17-1 ]
  • 2
  • [ 116163-18-9 ]
  • [ 103831-11-4 ]
  • [ 116163-46-3 ]
  • 3
  • [ 125290-83-7 ]
  • [ 103831-11-4 ]
  • 7-((S)-3-Amino-pyrrolidin-1-yl)-1-cyclopropyl-6-fluoro-5-methyl-4-oxo-1,4-dihydro-[1,8]naphthyridine-3-carboxylic acid ethyl ester [ No CAS ]
  • 4
  • [ 103831-11-4 ]
  • [ 138668-30-1 ]
  • [ 138668-32-3 ]
  • 5
  • [ 103831-11-4 ]
  • 7-Chloro-1-ethyl-6-fluoro-5-methyl-4-oxo-1,4-dihydro-[1,8]naphthyridine-3-carboxylic acid ethyl ester [ No CAS ]
  • 7-((S)-3-Amino-pyrrolidin-1-yl)-1-ethyl-6-fluoro-5-methyl-4-oxo-1,4-dihydro-[1,8]naphthyridine-3-carboxylic acid ethyl ester [ No CAS ]
  • 6
  • [ 103831-11-4 ]
  • 7-Chloro-6-fluoro-1-(2-fluoro-1,1-dimethyl-ethyl)-5-methyl-4-oxo-1,4-dihydro-[1,8]naphthyridine-3-carboxylic acid ethyl ester [ No CAS ]
  • 7-((S)-3-Amino-pyrrolidin-1-yl)-6-fluoro-1-(2-fluoro-1,1-dimethyl-ethyl)-5-methyl-4-oxo-1,4-dihydro-[1,8]naphthyridine-3-carboxylic acid ethyl ester [ No CAS ]
  • 7
  • [ 103831-11-4 ]
  • 7-Chloro-6-fluoro-1-(2-fluoro-ethyl)-5-methyl-4-oxo-1,4-dihydro-[1,8]naphthyridine-3-carboxylic acid ethyl ester [ No CAS ]
  • 7-((S)-3-Amino-pyrrolidin-1-yl)-6-fluoro-1-(2-fluoro-ethyl)-5-methyl-4-oxo-1,4-dihydro-[1,8]naphthyridine-3-carboxylic acid ethyl ester [ No CAS ]
  • 8
  • [ 103831-11-4 ]
  • [ 132195-55-2 ]
  • [ 132195-56-3 ]
  • 9
  • [ 103831-11-4 ]
  • [ 138668-31-2 ]
  • 7-((S)-3-Amino-pyrrolidin-1-yl)-1-cyclopropyl-6-fluoro-4-oxo-5-phenyl-1,4-dihydro-[1,8]naphthyridine-3-carboxylic acid ethyl ester [ No CAS ]
  • 10
  • [ 103831-11-4 ]
  • 7-Chloro-6-fluoro-1-(4-fluoro-phenyl)-5-methyl-4-oxo-1,4-dihydro-[1,8]naphthyridine-3-carboxylic acid ethyl ester [ No CAS ]
  • [ 132195-48-3 ]
  • 11
  • [ 103831-11-4 ]
  • [ 132195-59-6 ]
  • [ 132195-60-9 ]
  • 12
  • [ 114636-29-2 ]
  • [ 103831-11-4 ]
  • 13
  • [ 103831-11-4 ]
  • [ 205125-68-4 ]
  • 6-fluoro-7-((3S)-3-amino-1-pyrrolidinyl)-1-(1-naphthyl)-4-oxo-1,4-dihydro-3-quinolinecarboxylic acid [ No CAS ]
  • 14
  • [ 103831-11-4 ]
  • [ 205125-70-8 ]
  • 6-fluoro-7-((3S)-3-amino-1-pyrrolidinyl)-1-(1-naphthyl)-4-oxo-1,4-dihydro-1,8-naphthyridine-3-carboxylic acid [ No CAS ]
  • 15
  • [ 103831-11-4 ]
  • [ 205125-69-5 ]
  • 6-fluoro-7-((3S)-3-amino-1-pyrrolidinyl)-1-(2-naphthyl)-4-oxo-1,4-dihydro-3-quinolinecarboxylic acid [ No CAS ]
  • 16
  • [ 103831-11-4 ]
  • [ 205125-71-9 ]
  • 6-fluoro-7-((3S)-3-amino-1-pyrrolidinyl)-1-(2-naphthyl)-4-oxo-1,4-dihydro-1,8-naphthyridine-3-carboxylic acid [ No CAS ]
  • 17
  • [ 103831-11-4 ]
  • 6,7-Difluoro-4-oxo-4H-[1,5']biquinolinyl-3-carboxylic acid; hydrochloride [ No CAS ]
  • 7-((S)-3-Amino-pyrrolidin-1-yl)-6-fluoro-4-oxo-4H-[1,5']biquinolinyl-3-carboxylic acid [ No CAS ]
  • 18
  • [ 103831-11-4 ]
  • 7-Chloro-6-fluoro-4-oxo-1-quinolin-5-yl-1,4-dihydro-[1,8]naphthyridine-3-carboxylic acid; hydrochloride [ No CAS ]
  • 7-((S)-3-Amino-pyrrolidin-1-yl)-6-fluoro-4-oxo-1-quinolin-5-yl-1,4-dihydro-[1,8]naphthyridine-3-carboxylic acid [ No CAS ]
  • 19
  • [ 103831-11-4 ]
  • 6,7-Difluoro-4-oxo-4H-[1,3']biquinolinyl-3-carboxylic acid; hydrochloride [ No CAS ]
  • 7-((S)-3-Amino-pyrrolidin-1-yl)-6-fluoro-4-oxo-4H-[1,3']biquinolinyl-3-carboxylic acid [ No CAS ]
  • 20
  • [ 103831-11-4 ]
  • 6,7-Difluoro-4-oxo-4H-[1,6']biquinolinyl-3-carboxylic acid; hydrochloride [ No CAS ]
  • 7-((S)-3-Amino-pyrrolidin-1-yl)-6-fluoro-4-oxo-4H-[1,6']biquinolinyl-3-carboxylic acid [ No CAS ]
  • 21
  • [ 103831-11-4 ]
  • 7-Chloro-6-fluoro-4-oxo-1-quinolin-3-yl-1,4-dihydro-[1,8]naphthyridine-3-carboxylic acid; hydrochloride [ No CAS ]
  • 7-((S)-3-Amino-pyrrolidin-1-yl)-6-fluoro-4-oxo-1-quinolin-3-yl-1,4-dihydro-[1,8]naphthyridine-3-carboxylic acid [ No CAS ]
  • 22
  • [ 103831-11-4 ]
  • 7-Chloro-6-fluoro-4-oxo-1-quinolin-6-yl-1,4-dihydro-[1,8]naphthyridine-3-carboxylic acid; hydrochloride [ No CAS ]
  • 7-((S)-3-Amino-pyrrolidin-1-yl)-6-fluoro-4-oxo-1-quinolin-6-yl-1,4-dihydro-[1,8]naphthyridine-3-carboxylic acid [ No CAS ]
  • 23
  • [ 103831-11-4 ]
  • [ 179739-41-4 ]
  • [ 181625-29-6 ]
YieldReaction ConditionsOperation in experiment
With triethylamine; In ethanol; N,N-dimethyl-formamide; EXAMPLE 49 1-(3-amino-4,6-difluorophenyl)-7-[(3S)-3-aminopyrrolidin-1-yl]-6-fluoro-1,4-dihydro-4-oxo-1,8-naphthyridine-3-carboxylic acid triethylamine salt To 1,000 mg of N,N-dimethylformamide were added 220 mg of 1-(3-amino-4,6-difluorophenyl)-7-chloro-6-fluoro-4-oxo-1,4-dihydro-1,8-naphthyridine-3-carboxylic acid, 210 mg of <strong>[103831-11-4](3S)-3-aminopyrrolidine dihydrochloride</strong>, and 400 mg of triethylamine. The solution was stirred at 90 C. for 1.5 hours. The reaction solution was allowed to cool down, combined with 10 ml of ethanol, heated at reflux for 5 minutes, and allowed to cool down. The precipitate was collected by filtration and washed with ethanol and then with diisopropyl ether to give 220 mg of the title compound.
  • 24
  • [ 24424-99-5 ]
  • [ 103831-11-4 ]
  • [ 147081-44-5 ]
YieldReaction ConditionsOperation in experiment
78% Na2CO3 (5.3 g, 49.9 mmol) was added to a suspension of <strong>[103831-11-4](S)-3-aminopyrrolidine dihydrochloride</strong> (3.61 g, 22.7 mmol) in 60 ml MeOH, and it was stirred for 45 min. Afterwards, the mixture was cooled with an ice bath and Boc2O (4.46 g, 20.4 mmol) in 60 ml MeOH was added dropwise. After stirring for 3 h at 0 C, the solvent was removed under reduced pressure and 60 ml 1 N HCl was added to the residue (pH ~ 2). The aqueous phase was extracted with DCM (1 x) in order to remove double protected (S)-3-aminopyrrolidine. The aqueous phase was made alkaline by addition of solid K2CO3 and was extracted with DCM (3 x). The combined organic phases were dried over Na2SO4 and the solvent was removed under reduced pressure. The title compound was obtained as a colourless oil (1.7 g, 78 % yield). 1H-NMR (300MHz, CDCl3): delta 3.40 - 3.26 (m, 3H), 3.23 - 3.13 (m, 1H), 2.85 (dd, 1H, J = 4.6 Hz, J = 10.3 Hz), 1.85 (dq, 1H, J = 6.0 Hz, 12.3 Hz), 1.52 (ddd, 1H, J = 6.3 Hz, J = 13.6 Hz, J = 20.2 Hz), 1.39 (s, 9H). ES-MS: m/z (%): 187 (100) [MH+], 228 (86) [(MH)+ + MeCN], 373 (30) [2MH+], 172 (21) [(MH)+ + MeCN - C4H8], 131 (20) [MH+ - C4H8].
  • 25
  • [ 853029-57-9 ]
  • [ 103831-11-4 ]
  • (R)-8-(3-aminopyrrolidin-1-yl)-7-(but-2-ynyl)-3-methyl-1-[(4-methylquinazolin-2-yl)methyl]-1H-purine-2,6(3H,7H)-dione [ No CAS ]
YieldReaction ConditionsOperation in experiment
70% With potassium carbonate; In N,N-dimethyl-formamide; at 75℃; for 6h; General procedure: A mixture of 4a (181 mg, 0.4 mmol), (R)-3-aminopyrrolidine dihydrochloride (70 mg, 0.44 mmol) and K2CO3 (110 mg, 0.8 mmol) in DMF (4 mL) was stirred at 75 C for 6 h. After cooling to r.t., the mixture was poured into water (4 mL) and extracted with DCM (3 * 10 mL). The organic layers were combined and washed with saturated brine, dried over anhydrous Na2SO4, and concentrated. The crude product was purified by flash chromatography (DCM/MeOH/TEA, 100:1:0.5) to give pure 1f as a light yellow solid (128 mg, 70%). mp: 236-240 C. [alpha]D20-2.410 (c 0.083, MeOH). IR (KBr, cm-1): 3441, 3168, 2360, 2341, 1697, 1655, 1621, 1565, 1524, 1400, 1235, 945, 762. 1H NMR (300 MHz, CDCl3): delta 7.99 (d, J = 8.2 Hz, 1H), 7.85 (d, J = 8.4 Hz, 1H), 7.74 (t, J = 7.6 Hz, 1H), 7.50 (t, J = 7.5 Hz, 1H), 5.55 (s, 2H), 5.05 (d, J = 2.2 Hz, 2H), 4.05-3.84 (m, 2H), 3.84-3.65 (m, 2H), 3.65-3.40 (m, 4H), 2.88 (d, J = 10.9 Hz, 3H), 2.19 (dt, J = 12.8, 7.1 Hz, 1H), 1.96-1.66 (m, 5H). 13C NMR (75 MHz, CDCl3): delta 168.3, 161.3, 154.6, 153.9, 151.9, 149.9, 149.2, 133.0, 128.8, 126.5, 124.7, 123.0, 103.2, 81.3, 73.7, 57.8, 51.1, 47.9, 46.1, 35.2, 34.6, 29.5, 21.7, 3.6. HRMS (ESI) calcd for C24H27N8O2 [M+H]+ 459.2257, found 459.2260.
  • 26
  • [ 853029-57-9 ]
  • [ 103831-11-4 ]
  • (S)-8-(3-aminopyrrolidin-1-yl)-7-(but-2-ynyl)-3-methyl-1-[(4-methylquinazolin-2-yl)methyl]-1H-purine-2,6(3H,7H)-dione [ No CAS ]
YieldReaction ConditionsOperation in experiment
65% With potassium carbonate; In N,N-dimethyl-formamide; at 75.0℃; for 6h; General procedure: A mixture of 4a (181 mg, 0.4 mmol), (R)-3-aminopyrrolidine dihydrochloride (70 mg, 0.44 mmol) and K2CO3 (110 mg, 0.8 mmol) in DMF (4 mL) was stirred at 75 C for 6 h. After cooling to r.t., the mixture was poured into water (4 mL) and extracted with DCM (3 * 10 mL). The organic layers were combined and washed with saturated brine, dried over anhydrous Na2SO4, and concentrated. The crude product was purified by flash chromatography (DCM/MeOH/TEA, 100:1:0.5) to give pure 1f as a light yellow solid (128 mg, 70%).
  • 27
  • [ 865758-96-9 ]
  • [ 103831-11-4 ]
  • (S)-6-(3-aminopyrrolidin-1-yl)-1-(2-cyanobenzyl)-3-methylpyrimidine-2,4(1H,3H)-dione [ No CAS ]
YieldReaction ConditionsOperation in experiment
82% With sodium hydrogencarbonate; In isopropyl alcohol; at 100.0℃; for 2h;Molecular sieve; General procedure: A mixture of 6c (8 g, 22.5 mmol), (R)-3-aminopiperidine dihydrochloride (4.67 g, 27 mmol), NaHCO3 (9.45 g, 112.5 mmol) and activated 4 A MS (2.6 g) in isopropanol (150 mL) was stirred at 100 C for 2 h. The reaction mixture was filtered through Celite and concentrated in vacuo. The residue was diluted with DCM, washed with water and saturated brine, dried over anhydrous Na2SO4, and concentrated. The crude product was purified by flash chromatography (DCM/MeOH/TEA, 100:0.5:0.5) to give pure 2h as a light yellow solid (8 g, 85%).
  • 28
  • 5-chloro-N<SUP>1</SUP>-(2-chloro-9-isopropyl-9H-purin-6-yl)benzene-1,3-diamine [ No CAS ]
  • [ 103831-11-4 ]
  • (S)-N<SUP>6</SUP>-(3-amino-5-chlorophenyl)-9-isopropyl-N<SUP>2</SUP>-(pyrrolidin-3-yl)-9H-purine-2,6-diamine [ No CAS ]
YieldReaction ConditionsOperation in experiment
36% With triethylamine; In 1-methyl-pyrrolidin-2-one; at 160.0℃; for 16h; General procedure: To a solution of 2-chloro-N-(3-chlorophenyl)-9-ethyl-9H-purin-6-amine (0.360 g, 1.17 mmol) in 6.0 mL of NMP were added TEA (0.33 mL, 2.3 mmol), and cis-cyclohexane-1,2-diamine (0.400 g, 3.50 mmol) at rt. The reaction mixture was stirred at 160 C for 16 h, allowed to cool to rt, then partitioned between water and dichloromethane. The organic layer was washed with brine, dried (MgSO4), and concentrated, and finally purified by automated flash column chromatography (dichloromethane-methanol with 10% NH4OH: 0-10% gradient) to give 1 (0.244 g, 54%) as a brownish solid.
 

Historical Records

Technical Information

Categories

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[ 103831-11-4 ]

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