Structure of 1002309-48-9
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CAS No. : | 1002309-48-9 |
Formula : | C13H21BN2O2 |
M.W : | 248.13 |
SMILES Code : | C1(CCC1)[N]2C=C(C=N2)B3OC(C(O3)(C)C)(C)C |
MDL No. : | MFCD16659010 |
InChI Key : | OBCTWWFLJFCNPC-UHFFFAOYSA-N |
Pubchem ID : | 56965732 |
GHS Pictogram: |
![]() |
Signal Word: | Warning |
Hazard Statements: | H302-H315-H319-H332-H335 |
Precautionary Statements: | P261-P280-P305+P351+P338 |
Num. heavy atoms | 18 |
Num. arom. heavy atoms | 5 |
Fraction Csp3 | 0.77 |
Num. rotatable bonds | 2 |
Num. H-bond acceptors | 3.0 |
Num. H-bond donors | 0.0 |
Molar Refractivity | 72.27 |
TPSA ? Topological Polar Surface Area: Calculated from |
36.28 Ų |
Log Po/w (iLOGP)? iLOGP: in-house physics-based method implemented from |
0.0 |
Log Po/w (XLOGP3)? XLOGP3: Atomistic and knowledge-based method calculated by |
2.03 |
Log Po/w (WLOGP)? WLOGP: Atomistic method implemented from |
1.91 |
Log Po/w (MLOGP)? MLOGP: Topological method implemented from |
1.14 |
Log Po/w (SILICOS-IT)? SILICOS-IT: Hybrid fragmental/topological method calculated by |
1.01 |
Consensus Log Po/w? Consensus Log Po/w: Average of all five predictions |
1.22 |
Log S (ESOL):? ESOL: Topological method implemented from |
-2.73 |
Solubility | 0.461 mg/ml ; 0.00186 mol/l |
Class? Solubility class: Log S scale |
Soluble |
Log S (Ali)? Ali: Topological method implemented from |
-2.42 |
Solubility | 0.944 mg/ml ; 0.00381 mol/l |
Class? Solubility class: Log S scale |
Soluble |
Log S (SILICOS-IT)? SILICOS-IT: Fragmental method calculated by |
-2.89 |
Solubility | 0.317 mg/ml ; 0.00128 mol/l |
Class? Solubility class: Log S scale |
Soluble |
GI absorption? Gatrointestinal absorption: according to the white of the BOILED-Egg |
High |
BBB permeant? BBB permeation: according to the yolk of the BOILED-Egg |
Yes |
P-gp substrate? P-glycoprotein substrate: SVM model built on 1033 molecules (training set) |
Yes |
CYP1A2 inhibitor? Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set) |
No |
CYP2C19 inhibitor? Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set) |
No |
CYP2C9 inhibitor? Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set) |
No |
CYP2D6 inhibitor? Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set) |
No |
CYP3A4 inhibitor? Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set) |
No |
Log Kp (skin permeation)? Skin permeation: QSPR model implemented from |
-6.37 cm/s |
Lipinski? Lipinski (Pfizer) filter: implemented from |
0.0 |
Ghose? Ghose filter: implemented from |
None |
Veber? Veber (GSK) filter: implemented from |
0.0 |
Egan? Egan (Pharmacia) filter: implemented from |
0.0 |
Muegge? Muegge (Bayer) filter: implemented from |
0.0 |
Bioavailability Score? Abbott Bioavailability Score: Probability of F > 10% in rat |
0.55 |
PAINS? Pan Assay Interference Structures: implemented from |
0.0 alert |
Brenk? Structural Alert: implemented from |
1.0 alert: heavy_metal |
Leadlikeness? Leadlikeness: implemented from |
No; 1 violation:MW<1.0 |
Synthetic accessibility? Synthetic accessibility score: from 1 (very easy) to 10 (very difficult) |
3.19 |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
97% | With potassium phosphate;tris-(dibenzylideneacetone)dipalladium(0); XPhos; In 1,4-dioxane; at 20 - 75℃;Inert atmosphere; | Step A: Preparation of tert-butyl 3 -(cyanomethyl)-3-(4-(7-(l -cyclobutyl- 1H- pyrazol-4-yl)imidazo[ 1 ,2-c]pyrimidin-5-yl)- lH-pyrazol- 1 -yl)azetidine- 1 -carboxylate: The tert-butyl 3 -(4-(7-chloroimidazo [ 1 ,2-c]pyrimidin-5-yl)- 1 H-pyrazol- 1 -yl)-3 -(cyanomethyl) azetidine-1 -carboxylate (0.080 g, 0.19 mmol) (Preparation N), l-cyclobutyl-4-(4,4,5,5- tetramethyl-l ,3,2-dioxaborolan-2-yl)-lH-pyrazole (Table 2, compound e; 0.072 g, 0.29 mmol), and potassium phosphate (0.29 mL, 0.58 mmol) were combined in 3 mL of dioxane and argon was bubbled through for 10 minutes before dicyclohexyl(2',4',6'- triisopropylbiphenyl-2-yl)phosphine (0.018 g, 0.039 mmol) and Pd2dba3 (0.018 g, 0.019 mmol) were added. Argon was bubbled through the reaction for 1 minutes. The reaction flask was sealed and heated to 75 C with stirring for 2.5 hours and then at ambient temperature overnight. The reaction was concentrated under reduced pressure and the crude was purified by silica gel chromatography eluting with EtOAc containing 0.5% NH4OH to afford tert-butyl 3 -(cyanomethyl)-3-(4-(7-( 1 -cyclobutyl- 1 H-pyrazol-4-yl)imidazo [ 1 ,2- c]pyrimidin-5-yl)-l H-pyrazol- l-yl)azetidine-l -carboxylate (0.094 g, 0.19 mmol, 97% yield). MS (apci) m/z = 500.3 (M+H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
General procedure: A mixture of tert-butyl (3R)-3-([5-chloro-6-(4-cyanophenyl)imidazo[1,5-a]pyridin-8-yl]oxy}methyl)pyrrolidine-1-carboxylate (Example 6, Step 5: 10 mg, 0.02 mmol), <strong>[1002309-48-9]1-cyclobutyl-4-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)-1H-pyrazole</strong> (8.2 mg, 0.033 mmol), dichloro(bis{di-tert-butyl[4-(dimethylamino)phenyl]phosphoranyl})palladium (0.2 mg, 0.0002 mmol) and cesium fluoride (9.0 mg, 0.060 mmol) in tert-butyl alcohol (0.8 mL) and water (0.2 mL) was evacuated and filled with nitrogen. The mixture was stirred at 90 C. for 2 h then cooled to room temperature and filtered. The filtrate was concentrated and the residue was dissolved in methylene chloride (1 mL) then trifluoroacetic acid (0.5 mL) was added. The mixture was stirred at room temperature for 1 h then concentrated. The residue was dissolved in methanol then purified by prep HPLC (pH=2, acetonitrile/water+TFA) to give the desired product as the TFA salt. LC-MS calculated for C26H27N6O (M+H)+: m/z=439.2. found 439.2 |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With potassium phosphate; palladium diacetate; XPhos; In tetrahydrofuran; at 65℃;Inert atmosphere; | General procedure: To an appropriate-sized vial was added 7-((R)-1-((R)-5-oxopyrrolidin-3-yl)ethoxy)benzo[d]thiazol-5-yl trifluoromethanesulfonate (4.04) (1 eq.), boronic acid or pinacol ester (2 eq.), Pd(OAc)2 (3-15 mol %), 2-Dicyclohexylphosphino-2',4',6'-triisopropylbiphenyl (XPhos) (2-3 eq. vs. Pd(OAc)2), and K3PO4 (3 eq.). The vessel was purged with Ar, and the reagents were taken up in THF (ca. 25 volumes versus triflate) and water (75-100 eq.). The resulting mixture was stirred at 65 C. until the reaction was judged complete by HPLC, LC/MS or TLC. In certain cases where incomplete conversion was observed, additional boronic acid/ester, Pd(OAc)2, and XPhos were added. The mixture was diluted with EtOAc, water and brine, and the phases were separated. The aqueous phase was extracted with EtOAc. The combined organic phase was dried over Na2SO4, filtered, and concentrated. The residue was purified by silica gel chromatography to provide Examples 4.07-4.17, summarized in Table B below. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
43 mg | With (1,1'-bis(diphenylphosphino)ferrocene)palladium(II) dichloride; sodium carbonate; In 1,4-dioxane; water; at 70℃; for 0.75h; | To 8.3 (70 mg) in dioxan (1 mL) and 2M aqueous Na2003 (295 pL) was added borolane 4.8 (48.7 mg) and 1,V-Bis(diphenylphosphino)ferrocenedichloropalladium(ll) (A), 7.2 mg) and the mixture was stirred for 45 mins at 7000. The mixture was filtered via Agilent StratoSpheres PL-Thiol MP SPE using MeOH as eluent and purified via prep HPLC to yield after lyophilisation 43 mg of Example 1.Analysis: HPLC-MS: R1 = 0.68 mm (001_CAO2), M+H = 3981H NMR (DMSO, 400 MHz) 61.31 (3H, d, J=6.1 Hz), 1.78-1.85 (2H, m), 2.17-2.32 (2H, m),2.38-2.44 (3H, m), 2.75-2.77 (1H, m), 3.09-3.13 (1H, m), 3.37 (1H, t, J=9.0 Hz), 3.92 (3H, s),4.73-4.85 (2H, m), 6.66 (1H, s), 7.18 (1H, s), 7.53 (1H, s), 7.96 (1H, s), 8.33 (1H, s) |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
5.21% | 4-(4,4,5,5-Tetramethyl-1,3,2-dioxaborolan-2-yl)-1H-pyrazole (300 mg, 1.55 mmol) was dissolved in DMF (5 mL) at 0 C under Ar. NaH (60% in oil, 40.8 mg, 1.70 mmol) was added portionwise, and the reaction mixture was then stirred for 20 minutes at rt. A solution of bromocyclobutane (209 mg, 1.55 mmol) in 1 mL of DMF was added, and stirring was continued 2 h at rt. The reaction mixture was quenched with saturated aq. NH4Cl, and then extracted 3x with EtOAc, washed with brine, dried with Na2SO4, filtered and concentrated. The product was purified by silica gel chromatography to provide pyrazole boronate 20A (40 mg, 5.21 %) . MS (ESI): m/z 249.0 (M+H). | |
4-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)-1H-pyrazole (CAS 269410-08-4, 1.20 g, 6.18 mmol) was dissolved in DMF (23 mL) and sodium hydride (0.81 g, 18.6 mmol) was added at room temperature (rt). After 10 min, cyclobutyl bromide (2.51 g, 18.6 mmol) was added and the mixture stirred for 2 g at 50 C and further 16 h at rt. The mixture was partitioned between water and ethyl acetate, extracted with ethyl acetate, and the combined organic layers washed with water, dried (Na2SC>4) and concentrated. The crude product (1.14 g, 87% purity, 64% yield) was used without further purification. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
87% | With dichlorobis(triphenylphosphine)palladium(II); potassium carbonate; In 1,2-dimethoxyethane; water; at 90℃;Inert atmosphere; | methyl 5-amino-2-bromobenzoate (Int 1A, 4.21 g, 18.3 mmol), <strong>[1002309-48-9]1-cyclobutyl-4-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)-1H-pyrazole</strong> (5.00 g, 20.2 mmol) and potassium carbonate (8.36 g, 60.5 mmol) were dissolved in 1 ,2-dimethoxyethane (67 mL) and water (33 mL) under an atmosphere of nitrogen. Pd(PPh3)2Cl2 (155 mg, 0.22 mmol) was added and the reaction mixture heated at 90 C until completion. The reaction was cooled to RT, diluted with water (100 mL) and extracted with ethyl acetate (75 mL). The organic layer was washed with water (50 mL), brine (50 mL), dried (Na2S04), filtered and concentrated at reduced pressure. The crude product was purified by Biotage Isolera chromatography to give the title compound (4.34 g, 87% yield) as a yellow oil. 1H NMR (500 MHz, DMSO-d6) delta [ppm] 7.73 (d, J = 0.7 Hz, 1 H), 7.37 (d, J = 0.6 Hz, 1 H), 7.11 (d, J = 8.3 Hz, 1 H), 6.80 (d, J = 2.5 Hz, 1 H), 6.70 (dd, J = 8.3, 2.5 Hz, 1 H), 5.31 (s, 2H), 4.86 - 4.73 (m, 1 H), 3.69 (s, 3H), 2.48 -2.31 (m, 4H), 1.83 - 1.71 (m, 2H). LCMS (method 4): Rt = 0.94 min, MS (ESIpos) m/z = 272 (M+H) |
9.61 g | With bis-triphenylphosphine-palladium(II) chloride; potassium carbonate; In 1,2-dimethoxyethane; water; at 90℃;Inert atmosphere; | Under an atmosphere of nitrogen to a mixture of methyl 5-amino-2-bromobenzoate (Int. 1A, 11.5 g, 50.38 mmol), <strong>[1002309-48-9]1-cyclobutyl-4-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)-1H-pyrazole</strong> (15.0 g, 60.45 mmol) and potassium carbonate (22.98 g, 166.24 mmol) in 1,2-dimethoxyethane (183 mL) and water (91 mL) was added Pd(PPh3)2Cl2 (425 mg, 0.61 mmol) and the reaction mixture heated at 90 C. until completion. The reaction was cooled to RT, diluted with water (200 mL) and extracted with ethyl acetate (150 mL). The organic layer was washed with water (100 mL), brine (100 mL), dried (Na2SO4), filtered and concentrated at reduced pressure. The residue was purified by Biotage Isolera chromatography (using a gradient of eluents; 0-40% EE in heptane) to give the title compound (9.61 g, 70% yield) as a golden oil. 1H NMR (500 MHz, DMSO-d6) delta [ppm] 7.73 (d, J=0.7 Hz, 1H), 7.37 (d, J=0.6 Hz, 1H), 7.11 (d, J=8.3 Hz, 1H), 6.80 (d, J=2.5 Hz, 1H), 6.70 (dd, J=8.3, 2.5 Hz, 1H), 5.31 (s, 2H), 4.86-4.73 (m, 1H), 3.69 (s, 3H), 2.48-2.31 (m, 4H), 1.83-1.71 (m, 2H). LCMS (method 3): Rt=0.88 min; MS (ESIPos) m/z=272.8 (M+H)+. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
86% | With dicyclohexyl-(2',6'-dimethoxybiphenyl-2-yl)-phosphane; palladium diacetate; In tetrahydrofuran; water; at 60℃; for 16h;Inert atmosphere; Sealed tube; | A mixture of <strong>[1002309-48-9]1-cyclobutyl-4-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)-1H-pyrazole</strong> (440 mg, 1 .77 mmol), ethyl 5-amino-2-bromo-3-fluorobenzoate (310 mg, 1 .18 mmol), palladium(ll) acetate (13 mg, 0.06 mmol), 2-dicyclohexylphosphino-2',6'-dimethoxybiphenyl (48 mg, 0.12 mmol) and potassium phosphate (752 mg, 3.55 mmol) in tetrahydrofuran/water (7: 1 v/v/; 5.9 mL) in a pressure tube was degassed with nitrogen for 5 minutes. After this time the tube was sealed and the reaction mixture warmed to 60 C for 16 h. The reaction mixture was allowed to cool to room temperature and was partitioned between EtOAc and saturated aqueous sodium hydrogen carbonate solution. The aqueous layer was removed and the organic layer was washed with saturated aqueous sodium chloride solution, dried (MgS04), filtered and concentrated at reduced pressure. The residue was purified by Biotage Isolera chromatography (eluting with a gradient of eluents; 100% heptane to 6:4 heptane/ EtOAc) giving the title compound (470 mg, 86% yield) as a pale yellow solid. 1H NMR (250 MHz, DMSO-d6) delta [ppm] 7.70 (s, 1 H), 7.33 (s, 1 H), 6.66 (d, J = 2.3 Hz, 1 H), 6.53 (dd, J = 12.6, 2.3 Hz, 1 H), 5.67 (s, 2H), 4.83 (m, 1 H), 4.11 (q, J = 7.1 Hz, 2H), 2.45 -2.28 (m, 4H), 1.87 - 1.69 (m, 2H), 1.07 (t, J = 7.1 Hz, 3H). LCMS (Analytical Method A) Rt = 1.11 min, MS (ESIPos): m/z = 304.05 (M+H) |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
94% | With dichlorobis(triphenylphosphine)palladium(II); potassium carbonate; In 1,2-dimethoxyethane; water; at 100℃; for 1h;Inert atmosphere; | A mixture of <strong>[1002309-48-9]1-cyclobutyl-4-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)-1H-pyrazole</strong> (7.56 g, 30.45 mmol), Pd(PPh3)2Cl2 (388 mg, 0.55 mmol), K2C03 (7.65 g, 55.37 mmol) and ethyl 3-fluoro-5-nitro-2-[(trifluoromethyl)sulfonyl]oxy}benzoate (Int 100A, 10.00 g, 27.68 mmol) was split equally between 8 pressure tubes and dissolved in DME/water (10:1 , 8 x 17.3 mL) and the resulting solutions were degassed with nitrogen for 5 minutes. The reaction vessels were sealed and heated to 100 C for 1 hour. The reaction mixtures were then cooled to room temperature, combined and diluted with ethyl acetate and washed with 1M aqueous sodium hydroxide solution, then saturated aqueous sodium chloride solution, dried (MgS04), filtered and concentrated at reduced pressure. The residue was purified by Biotage Isolera chromatography (eluting with a gradient of eluents; 100% heptane to 85:15 heptane/ EtOAc) giving the desired product (8.65 g, 94% yield) as a pale yellow oil. 1H NMR (250 MHz, chloroform-d) delta [ppm] 8.34 (dd, J = 2.3, 1.2 Hz, 1 H), 8.10 (dd, J = 9.6, 2.4 Hz, 1 H), 7.77 (d, J = 2.2 Hz, 1 H), 7.68 (s, 1 H), 4.84 (m, 1 H), 4.35 (q, J = 7.1 Hz, 2H), 2.71-2.47 (m, 4H), 2.04 - 1.84 (m, 2H), 1.30 (t, J = 7.1 Hz, 3H). LCMS (Analytical Method A): Rt = 1.30 mins; MS (ESIPos): m/z = 334.0 (M+H)+. |
94% | With bis-triphenylphosphine-palladium(II) chloride; potassium carbonate; In 1,2-dimethoxyethane; water; at 100℃; for 1h;Inert atmosphere; Sealed tube; | A biphasic mixture of <strong>[1002309-48-9]1-cyclobutyl-4-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)-1H-pyrazole</strong> (7.56 g, 30.45 mmol), Pd(PPh3)2Cl2 (388 mg, 0.55 mmol), K2CO3 (7.65 g, 55.37 mmol) and ethyl 3-fluoro-5-nitro-2-[(trifluoromethyl)sulfonyl]oxy}benzoate (10.00 g, 27.68 mmol) was split equally between 8 pressure tubes and dissolved in DME/water (10:1, 8*17.3 mL) and the resulting solutions were degassed with nitrogen for 5 minutes. The reaction vessels were sealed and heated to 100 C. for 1 hour. The reaction mixtures were then cooled to room temperature, combined and diluted with ethyl acetate and washed with 1M aqueous sodium hydroxide solution, then saturated aqueous sodium chloride solution, dried (MgSO4), filtered and concentrated at reduced pressure. The residue was purified by Biotage Isolera chromatography (using a gradient of eluents; 0-15% EE in heptane) giving the title compound (8.65 g, 94% yield) as a pale yellow oil. 1H NMR (250 MHz, Chloroform-d) delta [ppm] 8.34 (dd, J=2.3, 1.2 Hz, 1H), 8.10 (dd, J=9.6, 2.4 Hz, 1H), 7.77 (d, J=2.2 Hz, 1H), 7.68 (s, 1H), 4.84 (m, 1H), 4.35 (q, J=7.1 Hz, 2H), 2.71-2.47 (m, 4H), 2.04-1.84 (m, 2H), 1.30 (t, J=7.1 Hz, 3H). LCMS (Analytical Method A): Rt=1.30 min; MS (ESIPos) m/z=334.0 (M+H)+. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
94% | With dicyclohexyl-(2',6'-dimethoxybiphenyl-2-yl)-phosphane; palladium diacetate; In tetrahydrofuran; water; at 80℃; for 16h;Inert atmosphere; | A mixture of 1-cyclobutyl-4-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)-1H- pyrazole (934 mg, 3.76 mmol), ethyl 3-amino-6-chloro-2-fluorobenzoate (Int 125A, 700 mg, 2.51 mmol), palladium(ll) acetate (28 mg, 0.13 mmol), 2- dicyclohexylphosphino-2',6'-dimethoxybiphenyl (103 mg, 0.25 mmol) and potassium phosphate (1.60 g, 3.55 mmol) in tetrahydrofuran /water (7:1 v/v; 12.5 mL) in a pressure tube was degassed with nitrogen for 5 minutes. After this time the reaction mixture heated at 80 C for 16 h. The reaction mixture was allowed to cool to room temperature and was then partitioned between EtOAc and saturated aqueous sodium hydrogen carbonate solution. The aqueous layer was removed and the organic layer was washed with saturated aqueous sodium chloride solution, dried (MgS04), filtered and concentrated at reduced pressure. The residue was purified by Biotage Isolera chromatography (eluting with a gradient of eluents; 100% heptane to 6:4 heptane/ EtOAc) giving the title compound (733 mg, 94% yield) as a dark yellow oil. 1H NMR (250 MHz, DMSO-d6) delta [ppm] 7.65 (d, J = 0.6 Hz, 1 H), 7.34 - 7.28 (m, 1 H), 6.91 (dd, J = 8.3, 0.7 Hz, 1 H), 6.73 (dd, J = 9.3, 8.4 Hz, 1 H), 5.24 (s, 2H), 4.71 (m, 1 H), 4.15 (q, J = 7.1 Hz, 2H), 2.36 -2.19 (m, 4H), 1.75 - 1.59 (m, 2H), 1.08 (t, J = 7.1 Hz, 3H). LCMS (Analytical Method A) Rt = 1.11 min, MS (ESIpos): m/z = 304.55 (M+H)+. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
52% | With dichlorobis(triphenylphosphine)palladium(II); potassium carbonate; In 1,2-dimethoxyethane; water; at 100℃; for 2.5h;Inert atmosphere; Sealed tube; | In a sealed tube, <strong>[1002309-48-9]1-cyclobutyl-4-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)-1H-pyrazole</strong> (500 mg, 2.02 mmol) and ethyl 2-bromo-3-chloro-5-nitrobenzoate (Int 128A, 478 mg, 1.55 mmol) in DME (8 mL) and water (1.5 mL) was degassed with nitrogen for 5 minutes. Pd(PPh3)2Cl2 (22 mg, 0.03 mmol) and potassium carbonate (643 mg, 4.65 mmol) were then added and the reaction was heated to 100 C for 2.5 hours. The reaction was then cooled to room temperature and diluted with water and EtOAc. The layers were separated and the aqueous was extracted twice with EtOAc. Combined organic extracts were dried over MgS04, filtered, concentrated under reduced pressure and the residue obtained was purified by Biotage Isolera chromatography (eluting with a gradient of eluents, 0-25% EtOAc in heptane) to afford the title compound (385 mg, 52% yield) as a viscous pale yellow oil. 1H NMR (250 MHz, chloroform-d) delta [ppm] 8.44 (d, J = 2.4 Hz, 1 H), 8.40 (d, J = 2.4 Hz, 1 H), 7.65 (m, 1 H), 7.60 (m, 1 H), 4.84 (m, 1 H), 4.24 (q, J = 7.1 Hz, 2H), 2.69 -2.48 (m, 4H), 2.06 - 1 .81 (m, 2H), 1 .18 (t, J = 7.1 Hz, 3H). LCMS (Analytical Method A) Rt = 1 .29 min, MS (ESIpos): m/z = 350.0 (M+H) |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
84% | With dichlorobis(triphenylphosphine)palladium(II); potassium carbonate; In 1,2-dimethoxyethane; water; at 100℃; for 16h;Inert atmosphere; | A mixture of ethyl 2-bromo-3-methyl-5-nitrobenzoate (Int 138A, 0.576 g, 2.00 mmol), <strong>[1002309-48-9]1-cyclobutyl-4-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)-1H-pyrazole</strong> (0.744 g, 3.00 mmol), potassium carbonate (0.829 g, 6.00 mmol) and dichlorobis(triphenylphosphine)palladium(ll) (28 mg, 0.04 mmol) in dimethoxyethane/water (10 mL; 2: 1 v/v) was degassed by bubbling nitrogen through the mixture for 5 minutes and then heated at 100 C for 16 hours. The mixture was then allowed to cool to room temperature and filtered through Celite (washing with EtOAc). The organic layer was washed with saturated aqueous sodium chloride solution, dried (MgS04), filtered and concentrated at reduced pressure. The residue purified by Biotage Isolera chromatography (eluting with a gradient of eluents; 100% heptane to 8:2 heptane/ EtOAc) giving the title compound (0.56 g, 84% yield) as a pale yellow oil. 1H NMR (250 MHz, chloroform-d) delta [ppm] 8.35 (d, J = 2.2 Hz, 1 H), 8.22 (d, J = 1 .9 Hz, 1 H), 7.49 (m, 1 H), 7.46 (m, 1 H), 4.83 (m, 1 H), 4.18 (q, J = 7.1 Hz, 2H), 2.66 -2.50 (m, 4H), 2.39 (s, 3H), 2.02 - 1 .86 (m, 2H), 1 .14 (t, J = 7.1 Hz, 3H). LCMS (Analytical Method A): Rt = 1 .35 min, MS (ESIPos): m/z = 330.05 (M+H) |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
72% | With dichlorobis(triphenylphosphine)palladium(II); potassium carbonate; In 1,2-dimethoxyethane; water; at 100℃; for 2h;Inert atmosphere; | <strong>[1002309-48-9]1-cyclobutyl-4-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)-1H-pyrazole</strong> (1.5 g, 6.0 mmol) and methyl 2-bromo-5-nitrobenzoate (1.66 g, 6.0 mmol) in DME (30 mL) and water (15 mL) was degassed with nitrogen for 5 minutes. Bis(triphenylphosphine)-palladium(ll) dichloride (127 mg, 0.18 mmol) and potassium carbonate (2.5 g, 18.1 mmol) were added and the reaction heated with stirring at 100 C for 2 hours. The reaction mixture was cooled to room temperature, diluted with water (30 mL) and extracted with EtOAc (50 mL). The organic layer was washed with brine (2 x 30 mL), dried (Na2S04), filtered and concentrated at reduced pressure. The residue was purified by Biotage Isolera chromatography (silica gel; using a gradient of eluents; 0-50% EtOAc in heptane) to give the title compound (1.72 g, 72% yield) as a yellow oil. 1H NMR (500 MHz, DMSO-d6) delta [ppm] 8.43 (d, J = 2.5 Hz, 1 H), 8.33 (dd, J = 8.7, 2.6 Hz, 1 H), 8.20 (s, 1 H), 7.83 (d, J = 8.7 Hz, 1 H), 7.72 (s, 1 H), 4.97 - 4.81 (m, 1 H), 3.85 (s, 3H), 2.45 -2.33 (m, 2H), 1.87 - 1.76 (m, 2H). LCMS (Analytical Method A): R t= 1.19 mins, MS (ESIPos): m/z = 302 (M+H) |
72% | With bis-triphenylphosphine-palladium(II) chloride; potassium carbonate; In 1,2-dimethoxyethane; water; at 100℃; for 2h;Inert atmosphere; | 1-Cyclobutyl-4-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)-1H-pyrazole (1.50 g, 6.0 mmol) and methyl 2-bromo-5-nitrobenzoate (1.66 g, 6.0 mmol) in DME (30 mL) and water (15 mL) was degassed with nitrogen for 5 minutes. Pd(PPh3)2Cl2 (127 mg, 0.18 mmol) and K2CO3 (2.5 g, 18.1 mmol) were then added and the reaction was heated to 100 C. for 2 hours. The reaction was then cooled to RT and diluted with water (30 mL) and extracted with EE (50 mL). The organic layer was then washed with brine (2*30 mL), dried (Na2SO4), filtered and concentrated at reduced pressure. The residue was purified by Biotage Isolera chromatography (using a gradient of eluents; 0-50% EE in heptane) to afford the title compound (1.72 g, 72% yield) as a yellow oil. 1H NMR (500 MHz, DMSO-d6) delta 8.43 (d, J=2.5 Hz, 1H), 8.33 (dd, J=8.7, 2.6 Hz, 1H), 8.20 (s, 1H), 7.83 (d, J=8.7 Hz, 1H), 7.72 (s, 1H), 4.97-4.81 (m, 1H), 3.85 (s, 3H), 2.45-2.33 (m, 4H), 1.87-1.76 (m, 2H). LCMS (Analytical Method A): Rt=1.19 min; MS (ESIPos) m/z=302 (M+H)+. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
36% | With [2,2]bipyridinyl; copper diacetate; sodium hydrogencarbonate; In N,N-dimethyl-formamide; at 20℃; for 96h; | Methyl 6-(4-chlorophenyl)-3-oxo-2,3-di hydropyridazi ne-4-carboxylate (0.5 g, 1 .89 mmcl) was dissolved in DMF (15 mL). 1 -Cyclobutyl-4-(4,4,5,5-tetramethyl-1 ,3,2-dioxaborolan-2-yl)- 1H-pyrazole (1406 mg, 5.67 mmol), 2,2?-bipyridine (737.7 mg, 4.72 mmol), sodium hydrogen carbonate (318 mg, 3.78 mmol), and anhydrous copper diacetate (429 mg, 3.79 mmol) wereadded. It was stirred for 96 h at rt. Water was added and the pH was adjusted to 3 with 2N HCI. The precipitate was filtered, washed three times with water, and dried at 50C under vacuum to afford 370 mg (36%) of the methyl ester which was used in the successive step without further purification. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
56% | With (1,1'-bis(diphenylphosphino)ferrocene)palladium(II) dichloride; potassium phosphate; In dimethyl sulfoxide; at 80℃; for 2h;Inert atmosphere; | A reaction vial was charged with l-cyclobutyl-4-(4,4,5,5-tetramethyl- 1,3,2-dioxaborolan-2-yl)- lH-pyrazole (49 mg, 0.20 mmol), 55-bromo- l4H-6-oxa-3-aza-2(2,6)-pyridina- 1(3,4)- triazola-5(l,2)-benzenacyclodecaphan-4-one (75 mg, 0.18 mmol), Pd(dppf)Cl2 (13 mg, 0.02 mmol) and K3P04 (80 mg, 0.38 mmol). The vial was purged with N2 for 10 min. DMSO (1 mL) was added and the resulting mixture was heated to 80 C for 2 h. After this time, the reaction mixture was allowed to reach room temperature and the solids were removed by filtration. The filtrate was subjected to HPLC purification (using an XTerra Prep RP18 OBD, 10 muiotaeta 50x250mm column and using water (containing 0.1% TFA)/CH3CN from 90/10 to 40/60 as the mobile phase at a flow rate of 50 mL/min) to give the title compound (57 mg, 56%) as a white solid. 1H NMR (400 MHz, DMSO-i) delta ppm 11.30 (s, IH), 8.77 (s, IH), 8.34 (d, 7=0.8 Hz, IH), 8.16 (d, 7=2.5 Hz, IH), 8.05 - 8.12 (m, IH), 7.90 - 7.94 (m, 2H), 7.87 (dd, 7=0.8, 7.8 Hz, IH), 7.81 (dd, 7=2.5, 8.5 Hz, IH), 7.31 (d, 7=8.8 Hz, IH), 4.84 (quin, 7=8.5 Hz, IH), 4.35 (br t, 7=5.0 Hz, 2H), 4.25 - 4.32 (m, 2H), 2.35 - 2.56 (m, 6H), 1.97 (br d, 7=6.0 Hz, 2H), 1.75 - 1.86 (m, 2H). MS (ESI): 456.2 [M + H]+. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With dichloro(1,1'-bis(diphenylphosphanyl)ferrocene)palladium(II)*CH2Cl2; sodium carbonate; In 1,4-dioxane; water; at 100℃; for 1h; | General procedure: To a 1,4-dioxane (1.0 mL) solution of N-((1S,2R)-2-(3-bromo-6-fluoro-2-methylphenyl)-1-(5-oxo-4,5-dihydro-1,3,4-oxadiazol-2-yl)propyl)-4-chloro-2-methoxybenzenesulfonamide (11 mg), 4-methoxyphenylboronic acid (5.0 mg),[1,1?-bis (diphenylphosphino) ferrocene] palladium (II) dichloride dichloromethane adduct (4.0 mg), and a sodium carbonateaqueous solution (2 M, 100 mL) was added sequentially at room temperature, and the reaction solution wasstirred at 100 C for 1 hour. The reaction solution was allowed to cool to room temperature, insoluble matter was removedby CELITE filtration, and the residue was washed with hexane / ethyl acetate = 1/1 (10 mL). The combined filtrate wasconcentrated under reduced pressure, and the obtained residue was purified by reverse phase HPLC (water / acetonitrile)to give the title compound. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With tetrakis(triphenylphosphine) palladium(0); potassium carbonate; In water; N,N-dimethyl-formamide; at 100℃; for 2h;Inert atmosphere; | General procedure: Add N- (2,5-difluorobenzyl) -3-iodopyrazolo [1,5-a] pyrimidin-5-amine (0.52 mmol), 1-Boc-pyrazole-4-boronic acid pinacol Ester (0.78 mmol), anhydrous potassium carbonate (2.08 mmol), tetrakis (triphenylphosphine) palladium (0.052 mmol) were added to a 100 ml reaction tube, replaced with argon 3 times, and 10 ml of anhydrous DMF and 2 ml of water were added.The reaction was performed at 100 C for 2 h under an argon atmosphere, and monitored by TLC (petroleum ether: acetone = 2: 1).After the reaction was completed, it was cooled to 50 C, filtered through celite, and the filtrate was added with water and extracted with ethyl acetate.The organic phase was washed twice with saturated brine, dried over anhydrous sodium sulfate, and concentrated to obtain a crude oily black product. The crude product was purified by column chromatography (TLC, petroleum ether: acetone = 2: 1) to obtain a pale yellow solid. |
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