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CAS No. : | 89565-68-4 | MDL No. : | MFCD00864399 |
Formula : | C17H20N2O2 | Boiling Point : | - |
Linear Structure Formula : | - | InChI Key : | - |
M.W : | 284.35 | Pubchem ID : | - |
Synonyms : |
SDZ-ICS-930 free base;ICS 205-930;ICF 205-930
|
Chemical Name : | rel-(1R,3r,5S)-8-Methyl-8-azabicyclo[3.2.1]octan-3-yl 1H-indole-3-carboxylate |
Num. heavy atoms : | 21 |
Num. arom. heavy atoms : | 9 |
Fraction Csp3 : | 0.47 |
Num. rotatable bonds : | 3 |
Num. H-bond acceptors : | 3.0 |
Num. H-bond donors : | 1.0 |
Molar Refractivity : | 85.81 |
TPSA : | 45.33 Ų |
GI absorption : | High |
BBB permeant : | Yes |
P-gp substrate : | No |
CYP1A2 inhibitor : | No |
CYP2C19 inhibitor : | No |
CYP2C9 inhibitor : | No |
CYP2D6 inhibitor : | Yes |
CYP3A4 inhibitor : | No |
Log Kp (skin permeation) : | -5.53 cm/s |
Log Po/w (iLOGP) : | 2.55 |
Log Po/w (XLOGP3) : | 3.53 |
Log Po/w (WLOGP) : | 2.57 |
Log Po/w (MLOGP) : | 2.39 |
Log Po/w (SILICOS-IT) : | 2.63 |
Consensus Log Po/w : | 2.73 |
Lipinski : | 0.0 |
Ghose : | None |
Veber : | 0.0 |
Egan : | 0.0 |
Muegge : | 0.0 |
Bioavailability Score : | 0.55 |
Log S (ESOL) : | -3.95 |
Solubility : | 0.0322 mg/ml ; 0.000113 mol/l |
Class : | Soluble |
Log S (Ali) : | -4.17 |
Solubility : | 0.0194 mg/ml ; 0.0000682 mol/l |
Class : | Moderately soluble |
Log S (SILICOS-IT) : | -3.94 |
Solubility : | 0.0327 mg/ml ; 0.000115 mol/l |
Class : | Soluble |
PAINS : | 0.0 alert |
Brenk : | 0.0 alert |
Leadlikeness : | 1.0 |
Synthetic accessibility : | 3.91 |
Signal Word: | Warning | Class: | N/A |
Precautionary Statements: | P261-P305+P351+P338 | UN#: | N/A |
Hazard Statements: | H302-H315-H319-H335 | Packing Group: | N/A |
GHS Pictogram: |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
80% | With triethylamine In tetrahydrofuran at 60 - 65℃; for 20h; | 1.2 (2) Preparation of (IV) (Figure 5): (III) (43.8 g, 0.31 mol), tetrahydrofuran (400 mL) and triethylamine (64.5 mL, 0.47 mol) were added to the reaction flask,The above-prepared solution of 3-indolyl chloride in tetrahydrofuran was added dropwise to the reaction flask,Bi completed,Rose to 60 ~ 65 ° C and stirred for 20h,TLC detection of the reaction process,After the reaction,The system was concentrated under reduced pressure to remove tetrahydrofuran,The residue was added with ethyl acetate (500mL) and water (250ml) were dissolved with stirring and transferred to a separatory funnel to separate,Points to the water layer,The organic layer was dried with anhydrous sodium sulfate,filter,The filtrate was concentrated to dryness under reduced pressure,Desopostan (IV) 70.6 g,Yield 80%; |
With n-butyllithium 1.) hexane, 0 deg C, 30 min, 2.) hexane, THF, 25 deg C, 24 h; Multistep reaction; | ||
0.9 g | Stage #1: 3-tropanol With n-butyllithium In tetrahydrofuran; hexane for 0.5h; Inert atmosphere; Stage #2: Indole-3-carbonyl chloride In tetrahydrofuran; hexane for 16h; | 4 Synthesis of exo-8-Methyl-8-aza-bicyclo[3.2.1]octan-3-yl 1H-indole-3-carboxylate (Compound 4) The synthesis of exo-8-methyl-8-aza-bicyclo[3.2.1]octan-3-yl 1H-indole-3-carboxylate (Compound 4) is illustrated in Synthesis Scheme 4 (). A solution of indole-3-carboxylic acid, 1 (1.5 g, 9.31 mmol) in dichloromethane (15 mL) at room temperature under argon atmosphere was treated with thionyl chloride (15 mL, 205.64 mmol) and stirred for 2 h under reflux. The solution was then concentrated to leave the acid chloride as a dark brown solid. The solid was then co-evaporated with dichloromethane (2*25 mL) and dried under vacuum to remove the volatile impurities. The dark brown solid was then dissolved in dry THF (15 mL). Meanwhile, on a separate flask, a solution of pseudotropine, 2 (1.45 g, 10.27 mmol) in dry THF (15 mL) at 5° C. under argon atmosphere was treated with n-butyl lithium (0.6 M in hexanes, 8.6 mL, 5.16 mmol) and stirred for 30 min. at the same temperature. A solution of the above acid chloride was added to the alkoxide solution at 5° C. dropwise. After completion of addition, the reaction mixture was allowed to warm to room temperature during which time a thick suspension was formed and stirred for another 16 h at room temperature. The reaction was monitored with TLC. After completion, the reaction mixture was evaporated under vacuum. The residue was dissolved in dichloromethane (100 mL), washed with water (3*50 mL), saturated brine (50 mL), dried over Na2SO4. The organic layer was filtered and evaporated under vacuum. The crude product was purified by flash column chromatography (neutral alumina) using a mixture of 4% MeOH in EtOAc as eluent to afford Cpd-4 (0.9 g, 34.0%) as a colorless solid. Rf: 0.2 (20% MeOH in CHCl3). 1H-NMR (CDCl3): δ 1.82-1.89 (m, 2H), 2.05-2.21 (m, 6H), 2.52 (s, 3H), 3.38 (bs, 2H), 5.44-5.51 (m, 1H), 7.26-7.31 (m, 2H), 7.43-7.47 (m, 1H), 8.05 (s, 1H), 8.21-8.27 (m, 1H), 11.45 (bs, 1H). LC-MS m/z: 285 [M+H]+. |
0.9 g | Stage #1: 3-tropanol With n-butyllithium In tetrahydrofuran; hexane for 0.5h; Inert atmosphere; Stage #2: Indole-3-carbonyl chloride In tetrahydrofuran; hexane for 16h; | 4 Synthesis of exo-8-Methyl-8-aza-bicyclo[3.2.1]octan-3-yl 1H-indole-3-carboxylate (Compound 4) The synthesis of exo-8-methyl-8-aza-bicyclo[3.2.1]octan-3-yl 1H-indole-3-carboxylate (Compound 4) is illustrated in Synthesis Scheme 4 (). A solution of indole-3-carboxylic acid, 1 (1.5 g, 9.31 mmol) in dichloromethane (15 mL) at room temperature under argon atmosphere was treated with thionyl chloride (15 mL, 205.64 mmol) and stirred for 2 h under reflux. The solution was then concentrated to leave the acid chloride as a dark brown solid. The solid was then co-evaporated with dichloromethane (2*25 mL) and dried under vacuum to remove the volatile impurities. The dark brown solid was then dissolved in dry THF (15 mL). Meanwhile, on a separate flask, a solution of pseudotropine, 2 (1.45 g, 10.27 mmol) in dry THF (15 mL) at 5° C. under argon atmosphere was treated with n-butyl lithium (0.6 M in hexanes, 8.6 mL, 5.16 mmol) and stirred for 30 min. at the same temperature. A solution of the above acid chloride was added to the alkoxide solution at 5° C. dropwise. After completion of addition, the reaction mixture was allowed to warm to room temperature during which time a thick suspension was formed and stirred for another 16 h at room temperature. The reaction was monitored with TLC. After completion, the reaction mixture was evaporated under vacuum. The residue was dissolved in dichloromethane (100 mL), washed with water (3*50 mL), saturated brine (50 mL), dried over Na2SO4. The organic layer was filtered and evaporated under vacuum. The crude product was purified by flash column chromatography (neutral alumina) using a mixture of 4% MeOH in EtOAc as eluent to afford Cpd-4 (0.9 g, 34.0%) as a colorless solid. Rf: 0.2 (20% MeOH in CHCl3). 1H-NMR (CDCl3): δ 1.82-1.89 (m, 2H), 2.05-2.21 (m, 6H), 2.52 (s, 3H), 3.38 (bs, 2H), 5.44-5.51 (m, 1H), 7.26-7.31 (m, 2H), 7.43-7.47 (m, 1H), 8.05 (s, 1H), 8.21-8.27 (m, 1H), 11.45 (bs, 1H). LC-MS m/z: 285 [M+H]+. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Particular examples of compounds from within Group A include the compounds of Group B, namely: endo-N-(8-methyl-8-azabicyclo[3.2.1]oct-3-yl)2,3-dihydro-2-oxo-1H-benzimidazole-1-carboxamide (itasetron); endo-N-(8-methyl-8-azabicyclo[3.2.1]oct-3-yl)2,3-dihydro-3-ethyl-2-oxo-1H-benzimidazole-1-carboxamide (BIMU 1); endo-8-methyl-8-azabicyclo[3.2.1]oct-3-yl indole-3-carboxylate (tropisetron); endo-N-(9-methyl-9-azabicyclo[3.3.1]non-3-yl)-1-methylimidazole-3-carboxamide (granisetron); |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With potassium carbonate In toluene for 2.33333h; Heating; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 2 steps 1: thionyl chloride / dichloromethane / 2 h / 0 - 20 °C 2: triethylamine / tetrahydrofuran / 20 h / 60 - 65 °C |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
65% | With hydrogenchloride In ethanol; water at 0 - 50℃; for 4.5h; | 1.3 (3) Preparation of (V) (IV) (70.6g, 0.25mol), absolute ethanol (706mL) was added to the reaction flask,Heated to 50 stirring to dissolve,Hydrochloric acid (21mL) was slowly added dropwise and the reaction was stirred for 0.5h, cooled to about 0 ° C, and the crystals were stirred for 4h,filter,The filter cake was vacuum dried to give tropisetron hydrochloride (V) 64.7g, the total yield of 65%. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
32.1% | With n-butyllithium In tetrahydrofuran; hexane at -5 - 20℃; for 2h; | 4 Example 4 Add tropisetron (2.0 g, 7 mmol) to a 100 mL three-neck bottle.Add 10 mL of tetrahydrofuran,Cool down to -5 ° C,Add n-hexane solution of n-butyllithium (6 mL, 15 mmol),After the addition is completed,3-indoloyl chloride (1.8 g, 10 mmol)Soluble in 5mL tetrahydrofuran,Dropped into the reaction solution,After the addition was completed, the reaction was carried out at room temperature for 2 hours.The TLC test material has been reacted (dichloromethane: methanol = 10:1). After treatment: the reaction solution is suction filtered to remove insoluble matter.Distilling solvent under reduced pressure,Add ethyl acetate and water, extract,The organic phase is dried over anhydrous sodium sulfate and suction filtered.Distillation under reduced pressure gave the crude product. Separated and purified by column chromatography,The eluent is dichloromethane: methanol = 10:1,The product was obtained 895 mg,The yield was 32.1% and the purity was 97.5%. |