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CAS No. : | 58966-93-1 | MDL No. : | MFCD00074887 |
Formula : | C6H18Cl3N3 | Boiling Point : | - |
Linear Structure Formula : | - | InChI Key : | HNPMVNQYFPWBKI-UHFFFAOYSA-N |
M.W : | 238.59 | Pubchem ID : | 2724990 |
Synonyms : |
|
Num. heavy atoms : | 12 |
Num. arom. heavy atoms : | 0 |
Fraction Csp3 : | 1.0 |
Num. rotatable bonds : | 0 |
Num. H-bond acceptors : | 3.0 |
Num. H-bond donors : | 3.0 |
Molar Refractivity : | 69.89 |
TPSA : | 36.09 Ų |
GI absorption : | High |
BBB permeant : | No |
P-gp substrate : | No |
CYP1A2 inhibitor : | No |
CYP2C19 inhibitor : | No |
CYP2C9 inhibitor : | No |
CYP2D6 inhibitor : | No |
CYP3A4 inhibitor : | Yes |
Log Kp (skin permeation) : | -7.42 cm/s |
Log Po/w (iLOGP) : | 0.0 |
Log Po/w (XLOGP3) : | 0.47 |
Log Po/w (WLOGP) : | 0.03 |
Log Po/w (MLOGP) : | 0.34 |
Log Po/w (SILICOS-IT) : | 0.62 |
Consensus Log Po/w : | 0.29 |
Lipinski : | 0.0 |
Ghose : | None |
Veber : | 0.0 |
Egan : | 0.0 |
Muegge : | 0.0 |
Bioavailability Score : | 0.55 |
Log S (ESOL) : | -1.62 |
Solubility : | 5.79 mg/ml ; 0.0242 mol/l |
Class : | Very soluble |
Log S (Ali) : | -0.8 |
Solubility : | 38.1 mg/ml ; 0.16 mol/l |
Class : | Very soluble |
Log S (SILICOS-IT) : | -1.66 |
Solubility : | 5.17 mg/ml ; 0.0217 mol/l |
Class : | Soluble |
PAINS : | 0.0 alert |
Brenk : | 0.0 alert |
Leadlikeness : | 1.0 |
Synthetic accessibility : | 2.03 |
Signal Word: | Warning | Class: | N/A |
Precautionary Statements: | P261-P305+P351+P338 | UN#: | N/A |
Hazard Statements: | H302-H315-H319-H335 | Packing Group: | N/A |
GHS Pictogram: |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With N-ethyl-N,N-diisopropylamine; In 2-methoxy-ethanol; at 110℃; for 19h; | Example 944-f1 ,47)Triazonan-1-yl-67-dihvdro~5H~benzor6Jlcvc.oheptaf1 ,2-dt°^ ylamine <n="179"/>The product from Example 68A (52 mg, 0 212 mmol) was treated with 1 ,4,7-triazonane trihydrochloride (202 mg, 0,847 mmol), treated with Hunig's base (554 mul, 3.17 mmol), treated with 2-methoxyethanoJ (2116 mul), stirred at 1 10 0C for 19 hours, cooled, diluted with Et2O (25 mL), washed with 0.1 M NaOH (2 x 10 mL), washed with brine, dried (MgSO4), filtered, concentrated and purified by chromatography on silica gel (eluting with 2, 10 and 50 % (9:1 MeOH:concentrated NH4OH) in CH2CI2) to provide the title compound. 1H NMR (CD3OD) delta 2.08 - 2 24 (m, 2 H), 2 40 (t, J=6.94 Hz, 2 H), 2.67 (t, J=6.74 Hz, 2 H), 2.94 (s, 4 H), 3.10 - 3 16 (m, 4 H), 3 71 - 3.77 (m, 4 H), 7,24 - 7.29 (m, 1 H), 7,32 - 7.41 (m, 2 H), 7 63 - 7,68 (m, 1 H); MS (M+H)+ m/z 339. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
97% | With sodium tetrahydroborate; sodium hydroxide; at 20℃; for 0.25h;Inert atmosphere;Product distribution / selectivity; | Kit:- 2.4 mg 1 ,4,7-Triazacyclononane trihydrochloride (10"5mol)- 2.6 mg NaBH4 (6.9- 1(T5 mol)- 5.O nIgNaOH (IAlO-4 InOl)Protocol: The prepared kit was flushed with N2 for lOmin. ImI of eluted [TcO4]" solution was added and stirred for 15 min at room temperature. The reaction mixture was neutralized by the addition of HCl (0.1 M).Yield: 97%. The HPLC trace for the product is shown in Figure 12 |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
77% | With potassium carbonate; In acetonitrile; at 20℃; for 16h;Inert atmosphere; | 1,4,7-Triazacyclononane trihydrochloride (0.423 g, 1.77 mmol) and potassium carbonate (K2CO3) (1.56 g, 11.31 mmol) are successively added to a solution of compound 7 (2.90 g, 5.66 mmol) in 60 ml of anhydrous acetonitrile (CH3CN).The reaction mixture is then stirred for 16 h at ambient temperature, under argon.After evaporation of the solvent, the residue is dissolved in a mixture of 180 ml of ethyl acetate (CH3COOC2H5) and 100 ml of water.The organic phase is washed with 2×70 ml of water and 70 ml of a saturated solution of sodium chloride (NaCl), dried with sodium sulfate (Na2SO4), and then concentrated under reduced pressure (20 mbar).The resulting product (2.66 g) is purified by silica gel chromatography (40 ml, eluent: CH2Cl2/ethanol gradient ranging from 100/0 to 96/4), so as to give a compound 8 (1.99 g, yield 77%) in the form of a white powder.1H NMR (CD3CN, 400 MHz, 298 K): delta=1.21 (t, J=7.0 Hz, 19H, CH3); 2.58 and 2.67 (ABX, JAX=4.9 Hz, JBX=5.5 Hz, JAB=12.1 Hz, 6H, CH2S); 2.82 (s, 12H, N-CH2-CH2-N); 3.11 (s, 6H, CH2CO); 4.14 (q, J=7.0 Hz, 6H, CH2-CH3); 4.32-4.37 (m, 3H, CH), 7.17-7.27 (m, 30H, SC(C6H5)3); 7.33 (d, J=7.4 Hz, 15H, SC(C6H5)3); 7.50 (d, J=8.2 Hz, 3H, NH).13C NMR (CD3CN, 100 MHz, 298 K): delta=14.41 (CH3); 34.20 (CH2SC); 51.10 (CH); 57.12 and 61.98 (N-CH2-CH2-N); 63.01 (CH2CH3); 66.93 (CH2CO), 128.25-129.71 ((C6H5)3); 144.53 (C(C6H5)3); 171.08 and 170.57 (2*CO).ES-MS: m/z: [M+H+]+=1423.42 and [M+Cl-]-=1457.08.Elemental analysis calculated (%) for C84H90N6O9S3. H2O (1441.85 g/mol): C, 69.97; H, 6.43; N, 5.83; S, 6.67; found: C, 69.75; H, 6.36; N, 5.77; S, 7.02 |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
71% | With potassium carbonate; In acetonitrile; for 6h;Inert atmosphere; Reflux; | Synthesis of 1,4,7-tris[6-cyanopyridin-2-yl)methyl]-1,4,7-triazacyclononane or compound 8 A suspension of 238 mg (1 mmol) of <strong>[58966-93-1]1,4,7-triazacyclononane trishydrochloride</strong> in 30 ml of anhydrous acetonitrile (CAN) is admixed in succession with 853 mg (6.2 mmol) of K2CO3 and 610 mg (3.1 mmol) of compound 7 under an argon atmosphere. The reaction medium is refluxed for 6 hours. After filtration:to remove the inorganic salts, and evaporation of the solvent, the crude product is purified by chromatography on an alumina column (activity III) using pure CH2Cl2 and then a 99/1 v/v CH2Cl2/EtOH mixture as eluant. This gives 339 mg of compound 8 in the form of a brown-yellow oil (yield: 71%). 1H NMR (200 MHz, CDCl3) delta ppm: 2.91 (s, 12H, N(CH2)2N), 3.90 (s, 6H, pyCH2N), 7.63 (dd, J=7.31, 1.27 Hz, 3H, H3), 7.77 (d, J=7.00 Hz, 3H, H1), 7.86 (d, 7.63 Hz, 3H, H2) |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
87% | With potassium carbonate; In acetonitrile; at 60℃; for 3h;Inert atmosphere; | Potassium carbonate (34.7 mg, 250 mumol) and 1,4,7-triazacyclononane 4 (9.6 mg, 40 mumol) were added under inert atmosphere to a solution of mesylated derivative 38c (46.8 mg, 120 mumol) in anhydrous acetonitrile (5 mL). The reaction mixture was heated at 60 C. for 3 h under inert atmosphere. The progress of the reaction was monitored by HPLC. After this period, reaction was complete. The reaction mixture was cooled to room temperature and the solvent was removed under reduced pressure. The crude product obtained was purified by preparative HPLC: Macherey Nagel column (Hilic, 5 mum, 21×250 mm) with ammonium acetate buffer solution 50 mM pH 5.3-MeCN (v/v) as eluent [isocratic 97% MeCN (3 min)], linear gradient from 97 to 80% MeCN (20 min) with a flow rate of 14 mL min-1 and UV detection at 330 nm to give compound 41c in the form of a yellowish oil (32.7 mg, 87%). HMRS (ESI+) calculated for C57H55N6O9 [M+H]+, m/z 967.4025 found: 967.4022. Rt=13.73 min (Waters XBridge RP-C18 column, 3.5 mum, 4.6×100 mm) with 0.1% aqueous solution of formic acid (pH 2-MeCN (v/v) as eluent [isocratic 5% MeCN (1 min)], linear gradient from 5 to 100% MeCN (14 min), with a flow rate of 1 mL min-1. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
74% | With triethylamine; In 1,4-dioxane; water; for 24h; | 2-(4-Methoxybenzyloxycarbonyloxyimino)-2-phenylacetonitrile (477 mg, 1.5 mmol) was added to a solution of <strong>[58966-93-1]1,4,7-triazacyclononane hydrochloride</strong> 27a (188 mg, 0.78 mmol) in a dioxane/water mixture (10 mL, 8:2). The reaction mixture was homogenized by vigorous stirring, followed by addition of a solution of triethylamine (540 muL, 3.8 mmol) in a dioxane/water mixture (10 mL, 8:2). The reaction progress was monitored by TLC. After 24 hours, the reaction was complete. The solvent was removed under reduced pressure. The residue was dissolved in dichloromethane. This solution was washed with saturated aqueous sodium chloride solution (3×10 mL). The organic phase was dried over magnesium sulfate, filtered and concentrated under reduced pressure. The crude product was purified by chromatography on a column of alumina (dichloromethane/methanol, 98:2 to 90:10 in 1% increments) to give the desired compound 28a in the form of an oil (266 mg, 74%). 1H NMR (400 MHz, CDCl3) delta: 7.32-7.25 (m, 4H), 6.88-6.85 (m, 4H), 5.09 (m, 4H), 3.80 (s, 6H), 3.56-3.47 (m, 4H), 3.31-3.25 (m, 4H), 2.87 (m, 4H). 13C NMR (100 MHz, CDCl3) delta: 159.68; 156.76; 130.05; 128.92; 114.03; 67.15; 55.41; 52.20; 51.98; 51.26; 50.31; 50.07; 49.19; 48.18; 47.73; 47.66. |
74% | With triethylamine; In 1,4-dioxane; water; for 24h; | 2-(4-Methoxybenzyloxycarbonyloxyimino)-2-phenylacetonitrile (Moz-ON) (477 mg, 1.5 mmol) was added to a solution of <strong>[58966-93-1]1,4,7-triazacyclononane hydrochloride</strong> 4 (188 mg, 0.78 mmol) in a dioxane/water mixture (10 mL, 8:2). The reaction mixture was homogenized by stirring vigorously and then a solution of triethylamine (540 muL, 3.8 mmol) in a dioxane/water mixture (10 mL, 8:2) was added to this mixture. The progress of the reaction was monitored by TLC. After 24 h, reaction was complete. The solvent was removed under reduced pressure. The residue was dissolved in dichloromethane. This solution was washed with water saturated with sodium chloride (3×10 mL). The organic phase was dried over magnesium sulfate, filtered and concentrated under reduced pressure. The crude reaction product was purified by alumina column chromatography (dichloromethane/methanol 98:2 to 90:10 in increments of 1%) to give the desired compound 5 in the form of an oil (266 mg, 74%). 1H NMR (400 MHz, CDCl3) delta: 7.32-7.25 (m, 4H), 6.88-6.85 (m, 4H), 5.09 (m, 4H), 3.80 (s, 6H), 3.56-3.47 (m, 4H), 3.31-3.25 (m, 4H), 2.87 (m, 4H). 13C NMR (100 MHz, CDCl3) delta: 159.68, 156.76, 130.05, 128.92, 114.03, 67.15, 55.41, 52.20, 51.98, 51.26, 50.31, 50.07, 49.19, 48.18, 47.73, 47.66. LRMS (ESI+) calculated for C24H32N3O6 [M+H]+, m/z 458.2291. found: 458.08. Rf=0.48 (silica, dichloromethane -methanol 90:10). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
57% | With sodium carbonate; In acetonitrile; at 60℃; for 48h;Inert atmosphere; | To a suspension of Na2CO3 (1.59 g, 15 mmol, 10 equiv.) in 60 ml of acetonitrile under argon are added TACN.3HCl (356 mg, 1.5 mmol, 1.0 equiv.), and compound 2 (1.4 g, 4.79 mmol, 3.2 equiv.). The reaction mixture is stirred for 48 h at 60 C. under argon. After returning to room temperature, the reaction mixture is filtered and the filtrate is evaporated under reduced pressure. The reaction crude is purified by chromatography on a column of neutral alumina (Eluent: ethyl acetate). The final product is obtained as a yellow solid (814 mg, 57%). (0149) 1H NMR (200 MHz, CDCl3) delta: 8.35 (d, J=1.4 Hz, 3H), 8.21 (d, J=1.4 Hz, 3H), 3.97 (s, 9H), 3.93 (s, 6H), 2.90 (s, 12H) (0150) 13C NMR (125.76 MHz, CDCl3) delta: 164.6, 161.9, 147.65, 147.62, 135.6, 132.8, 106.65, 106.60, 63.9, 56.1, 53.2, 53.19, 53.14. (0151) HRMS (ESI+): (Calculated for C30H34I3N6O6: 954.9627); measured: [MH]+: m/z=954.9668. |
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Code | Phrase |
H400 | Very toxic to aquatic life |
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H411 | Toxic to aquatic life with long-lasting effects |
H412 | Harmful to aquatic life with long-lasting effects |
H413 | May cause long-lasting harmful effects to aquatic life |
H420 | Harms public health and the environment by destroying ozone in the upper atmosphere |
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