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Chemical Structure| 1208007-67-3
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CAS No. :1208007-67-3 MDL No. :MFCD22418840
Formula : C16H20BrN3O2 Boiling Point : -
Linear Structure Formula :- InChI Key :PZDCXMKEQLOWNP-ZDUSSCGKSA-N
M.W : 366.25 Pubchem ID :56605032
Synonyms :

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Signal Word:Warning Class:
Precautionary Statements:P264-P280-P302+P352-P337+P313-P305+P351+P338-P362+P364-P332+P313 UN#:
Hazard Statements:H315-H319 Packing Group:
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* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.

  • Downstream synthetic route of [ 1208007-67-3 ]

[ 1208007-67-3 ] Synthesis Path-Downstream   1~6

  • 1
  • [ 15761-39-4 ]
  • [ 1575-37-7 ]
  • [ 1208007-67-3 ]
YieldReaction ConditionsOperation in experiment
81% With N-ethyl-N,N-diisopropylamine; HATU In tetrahydrofuran at 0 - 20℃; for 4.5h; 1.9 Step 9) the preparation of compound 1-11 To a solution of compound 1-10 (20 g. 107 mmol) and compound HATU (48.82 g. 128.4 mmol) in THF (250 mL) was added DIPEA (19.5 mL, 118 mmol) at 0 °C. After stirring at 0 °C for 0.5 hr. to the solution was added the compound 1 -10-2 (25.6 g, 119 mmol) in a portionwise manner, then the reaction mixture was stirred at rt for 4 hrs. After the reaction was completed, the reaction was quenched with water (100 mL), the solvent THF was removed, and the resulting mixture was extracted with EtOAc (200 mL x 3). The combined organic layers were dried over anhydrous Na2S04 and concentrated in vacuo. The residue was dissolved in glacial acetic acid (100 mL). The solution was stirred at 40 °C overnight, and HOAc was removed. The resulting mixture was dissolved in EtOAc (400 mL), washed with Na2C03 aq (150 mL x 3) and dried over anhydrous Na2S04 and concentrated in vacuo. The residue was purified by a silica gel column chromatography (PE/EtOAc (v/v) = 1/2) to give the title compound (35 g, 81 %). The compound was characterized by the following spectroscopic data: MS (ESI, pos.ion) mlz: 367.3 [M+H] +; NMR (400 MHz, CDC13) 0 (ppm): 7.68 (s, 1 H), 7.42-7.40 (m, 1 H), 7.30-7.28 (m. 1 H), 5.11 -5.09 (m. 1 H), 3.45-3.43 (m. 2H). 2.94-2.93 (m. 1 H), 2.21-2.18 (m, 2H). 2.01 -1.91 (m, 1 H), 1 .49 (s, 9H).
81% With N-ethyl-N,N-diisopropylamine; HATU In tetrahydrofuran at 20℃; for 3.5h; Cooling with ice; 3.4 Step 4) the preparation of compound 3-3-2 To a solution of compound C-2 (20 g, 93 mmol), compound C-1 (19.1 g, 102 mmol) and HATU (38.9 g, 102 mmol) in THF (500 mL) in an ice bath was added DIPEA (20.5 mL, 118 mmol). The mixture was stirred in the ice bath for 0.5 hour and at rt for 3 hours. The resulting mixture was quenched with water. THF was removed in vacuo. The resulting mixture was extracted with EtOAc (150 mL x 3). The combined organic phases were dried over anhydrous Na2SO4 and concentrated in vacuo. The residue was used for the next step without further purification. A solution of the above residue in glacial acetic acid (100 mL) was stirred at 40 °C overnight, basified with NaHCO3 and extracted with EtOAc (150 mL x 3). The combined organic phases were dried over anhydrous Na2SO4 and concentrated in vacuo. The residue was purified by silica gel column chromatography (PE/EtOAc (v/v) = 2/1) to give compound C-3 (27.6 g, 81%). The compound was characterized by the following spectroscopic data: 1H NMR (400 MHz, CDCl3): δ 7.68 (s, 1H), 7.42-7.40 (m, 1H), 7.30-7.28 (m, 1H), 5.11-5.09 (m, 1H), 3.45-3.43 (m, 2H), 2.94-2.93 (m, 1H), 2.21-2.18 (m, 2H), 2.01-1.91 (m, 1H), 1.49 (s, 9H). [0292] To a mixture of compound C-3 (3.0 g, 8.2 mmol), bis(pinacolato)diboron (4.29 g, 16.9 mmol), Pd(dppf)Cl2·CH2Cl2 (653 mg, 0.8 mmol) and KOAc (2.09 g, 21.3 mmol) in a 50 mL of two-necked flask under N2 was added DMF (30 mL) via syringe. The resulting mixture was stirred at 90 °C overnight, cooled to rt naturally, and water (60 mL) was added. The mixture was extracted with EtOAc (30 mL x 3). The combined organic phases were washed with brine, dried over anhydrous Na2SO4 and concentrated in vacuo. The residue was purified by silica gel column chromatography (PE/EtOAc (v/v) = 1/2) to give compound 3-3-2 as a beige solid (2.1 g). The compound was characterized by the following spectroscopic data: 1H NMR (400 MHz, CDCl3): δ 7.69 (s, 1H), 7.45-7.43 (m, 1H), 7.32-7.30 (m, 1H), 5.12-5.10 (m, 1H), 3.45-3.43 (m, 2H), 2.95-2.94 (m, 1H), 2.25-2.22 (m, 2H), 2.01-1.91 (m, 1H), 1.49 (s, 9H), 1.35 (s, 12H).
81% Stage #1: 1-(tert-butoxycarbonyl)-L-proline With N-ethyl-N,N-diisopropylamine; HATU In tetrahydrofuran at 0℃; for 0.5h; Stage #2: 4-Bromo-benzene-1,2-diamine In tetrahydrofuran Stage #3: With acetic acid at 40℃; 3.15 Step 15) the preparation of compound 3-16 To a solution of compound 1-11 (23 g, 107 mmol) and HATU (48.82 g, 128.4 mmol) in THF (250 mL) at 0 °C was added DIPEA (19.5 mL, 118 mmol). The mixture was stirred at this temperature for 0.5 hour and then compound 3-16-0 (22.1 g, 119 mmol) was added in portions. After the reaction was completed, the reaction was quenched with water (100 mL) and the THF was removed in vacuo. The resulting mixture was extracted with EtOAc (200 mL x 3). The combined organic layers were washed with a saturated aqueous solution of NaCl, dried over anhydrous Na2S04 and concentrated in vacuo. The residue was dissolved in glacial acetic acid (100 mL) and the solution was stirred at 40 °C overnight. After the reaction was completed, the reaction mixture was concentrated in vacuo and the residue was dissolved in EtOAc (400 mL). The solution was washed with sodium carbonate aqueous solution (150 mL x 3), dried over anhydrous Na2S04 and concentrated in vacuo. The residue was purified by silica gel column chromatography (PE/EtOAc (v/v) = 1/2) to give the title compound as colorless oil (31.6 g, 81%). The compound was characterized by the following spectroscopic data: MS (ESI, pos.ion ) mlz: 367.3 [M+H]+; and H NMR (400 MHz, CDC13): δ 7.68 (s, 1H), 7.42-7.40 (m, 1H), 7.30-7.28 (m, 1H), 5.11-5.09 (m, 1H), 3.45-3.43 (m, 2H), 2.94-2.93 (m, 1H), 2.21-2.18 (m, 2H), 2.01-1.91 (m, 1H), 1.49 (s, 9H) ppm.
81% Stage #1: 1-(tert-butoxycarbonyl)-L-proline With N-ethyl-N,N-diisopropylamine; HATU In tetrahydrofuran at 0℃; for 0.5h; Stage #2: 4-Bromo-benzene-1,2-diamine In tetrahydrofuran at 20℃; for 4h; Stage #3: With acetic acid at 40℃; 1.9 10709] Step 9) the Preparation of Compound 1-11 10710] To a solution of compound 1-10 (20 g, 107 mmol) and compound HATU (48.82 g, 128.4 mmol) in THF (250 mE) was added DIPEA (19.5 mE, 118 mmol) at 0° C. After stirring at 0° C. for 0.5 hr, to the solution was added the compound 1-10-2 (25.6 g, 119 mmol) in a portionwise manner, then the reaction mixture was stirred at it for 4 hrs. After the reaction was completed, the reaction was quenched with water (100 mE), the solvent THF was removed, and the resulting mixture was extracted with EtOAc (200 mEx3). The combined organic layers were dried over anhydrous Na2504 and concentrated in vacuo. The residue was dissolved in glacial acetic acid (100 mE). The solution was stirred at 40° C. overnight, and HOAc was removed. The resulting mixture was dissolved in EtOAc (400 mE), washed with Na2CO3 aq (150 mEx3) and dried over anhydrous Na2504 and concentrated in vacuo. The residue was purified by a silica gel colunm chromatography (PE/EtOAc (v/v)=1/2) to give the title compound (35 g, 81%). The compound was characterized by the following spectroscopic data:10711] MS (ESI, pos.ion) mlz: 367.3 [M+H]10712] ‘H NMR (400 MHz, CDC13) ö (ppm): 7.68 (s, 1H),7.42-7.40 (m, 1H), 7.30-7.28 (m, 1H), 5.11-5.09 (m, 1H),3.45-3.43 (m, 2H), 2.94-2.93 (m, 1H), 2.21-2.18 (m, 2H),2.01-1.91 (m, 1H), 1.49 (s, 9H).
71% Stage #1: 1-(tert-butoxycarbonyl)-L-proline With N-ethyl-N,N-diisopropylamine; HATU In tetrahydrofuran at 20℃; for 0.166667h; Stage #2: 4-Bromo-benzene-1,2-diamine In tetrahydrofuran at 20℃; Stage #3: With acetic acid at 40℃; for 12h; 1a; 2 To a solution of N-Boc-L-Pro-OH (29 g, 135 mmol) and DIPEA (29 g, 225 mmol) in THF (500 mL) was added HATU (51 g, 135 mmol) at rt. After stirring at rt for 10 min, 4-bromobenzene-l,2-diamine (1-5) (25 g, 135 mmol) was added and the resulting solution was stirred at rt for another several hours. Subsequently, the reaction mixture was concentrated and the residue was diluted with EtOAc (500 mL). The resulting mixture was washed with water for several times (100 mL x 3) and dried with anhydrous Na2S04. The solvent was removed and the residue was dried in vacuo to give a mixture of acylated products, which were used for the next step without further purification.A mixture of acylated products from above in AcOH (1000 mL) was stirred at 40 °C for 12 hrs. After cooling, the reaction mixture was carefully neutralized by adding saturated aqueous sodium bicarbonate solution to adjust the pH value to 8. The resulting mixture was extracted with EtOAc (250 mL x 3). The combined extract was washed with water, and dried with anhydrous Na2S04. The solvent was removed and the residue was purified by silica gel chromatography (Petroleum ether/EtOAc = 4/1 (v/v)) to give (S)-tert- butyl 2-(6-bromo-lH-benzo[d]imidazol-2-yl)pyrrolidine-l-carboxylate (la-6) (35 g, 71% yield in 2 steps) as a yellow solid. LC-MS (ESI): m/z 366.1 [M+H]+.
71% Stage #1: 1-(tert-butoxycarbonyl)-L-proline With N-ethyl-N,N-diisopropylamine; HATU In tetrahydrofuran at 20℃; for 0.166667h; Stage #2: 4-Bromo-benzene-1,2-diamine In tetrahydrofuran at 20℃; Stage #3: With acetic acid at 40℃; for 12h; 11-1; 11.e; 11.f To a solution of N-Boc-L-Pro-OH (29 g, 135 mmol) and DIPEA (29 g, 225 mmol) in THF (500 mL) was added HATU (51 g, 135 mmol) at rt. After stirring at rt for 10 min, compound 42 (25 g, 135 mmol) was added and the resulting solution was stirred at rt for another several hours. Subsequently, the reaction mixture was concentrated and the residue was diluted with EtOAc (500 mL). The resulting mixture was washed with ¾0 several times (100 mL x 3) and dried with anhydrous Na2S04. The solvent was removed and the residue was dried in vacuo to give a mixture of crude compounds 43 and 43', which were used for the next step without further purification. LC-MS (ESI): m/z 384.1 (M+H)+. A mixture of crude compounds 43 and 43' obtained from the reaction above in AcOH (1000 mL) was stirred at 40 °C for 12 h. Subsequently, the reaction mixture was carefully neutralized by adding saturated aqueous sodium bicarbonate solution to adjust the pH value to 8. The resulting mixture was extracted with EtOAc several times (250 mL x 3). The extracts were combined, washed with water, and dried with anhydrous Na2S04. The solvent was removed and the residue was purified by silica gel chromatography (Petroleum ether/EtOAc = 4/1 (v/v)) to give compound 44 (35 g, 71% yield, two steps from compound 42) as a yellow solid. LC-MS (ESI): m/z 366.1 (M+H)+.
69% Stage #1: 1-(tert-butoxycarbonyl)-L-proline With 1,1'-carbonyldiimidazole In pyridine; N,N-dimethyl-formamide at 45℃; for 2h; Stage #2: 4-Bromo-benzene-1,2-diamine In pyridine; N,N-dimethyl-formamide at 20℃; Stage #3: With acetic acid at 100℃; for 0.5h; 1.1 To a solution of Boc-L-Proline (2669 mg, 12.4 mmol) in pyridine/DMF (30 mL, 1/1) was added di(lH-imidazol-l-yl)ketone (2205 mg, 13.6 mmol). The mixture was stirred at 45°C for 2 hours. 4-bromobenzene-l,2-diamine (2319 mg, 12.4 mmol) was added and the mixture was stirred at ambient temperature overnight. The solvent was removed and the residue heated in acetic acid (15 mL) at 100°C for 30 minutes. After concentration of the residue, the mixture was partitioned between ethyl acetate and a saturated sodium bicarbonate solution. The organic phase was separated and washed with water. After drying over Na2SC"4, the mixture was filtered and the filtrate was concentrated in vacuo. The obtained residue was purified by flash chromatography using DCM/EtOAc 90/10 to 50/50, resulting in compound II (3.146 g, 69 %).
69% Stage #1: 1-(tert-butoxycarbonyl)-L-proline With pyridine; 1,1'-carbonyldiimidazole In N,N-dimethyl-formamide at 45℃; for 2h; Stage #2: 4-Bromo-benzene-1,2-diamine In N,N-dimethyl-formamide at 20℃; 1.1 1.1 preparation of intermediate Ila (PG= Boc; X= Br)Ma; To a solution of Boc-Z-Proline (2669 mg, 12.4 mmol) in pyridine/DMF (30 mL, 1/1) was added di(lH-imidazol-l-yl)ketone (2205 mg, 13.6 mmol). The mixture was stirred at 45°C for 2 hours. 4-bromobenzene-l,2-diamine (2319 mg, 12.4 mmol) was added and the mixture was stirred at ambient temperature overnight. The solvent was removed and the residue heated in acetic acid (15 mL) at 100°C for 30 minutes. Afterconcentration of the residue, the mixture was partitioned between ethyl acetate and a saturated sodium bicarbonate solution. The organic phase was separated and washed with water, after drying over Na2SC"4, the mixture was filtrated and the filtrate was concentrated in vacuum. The obtained residue was purified by flash chromatography using CH2Cl2/EtOAc 90/10 to 50/50, resulting in compound Ila (3.146 g, 69 %).
63% Stage #1: 1-(tert-butoxycarbonyl)-L-proline With N-ethyl-N,N-diisopropylamine In tetrahydrofuran at 20 - 25℃; for 1h; Inert atmosphere; Large scale; Stage #2: With HATU In tetrahydrofuran at 20 - 25℃; Inert atmosphere; Large scale; Stage #3: 4-Bromo-benzene-1,2-diamine Large scale; Further stages; 2.1 Step 1. Referring to Scheme 2, N-Boc-L-Proline (4.02 kg, 1.0 eq.) and THF (52.5 L, 15.0 volume) were charged into a 200 L reactor under nitrogen atmosphere. The mixture was cooled to 20 - 25 °C and N, N-diisopropylethylamine (4.8 L, 1.5 eq.) was added over a period of 60 min. Next, HATU (7.11 kg, 1.0 eq.) was slowly added by portion wise over a period of 90 - 120 min at 20 - 25 °C under an atmosphere of nitrogen. After stirring at the same temperature for 15 min, 4-bromo-l, 2-diaminobenzene (3.50 kg, 1.0 eq.) was added into the reactor portion- wise over a period of 90 - 120 min. The resulting reaction mass was stirred at the same temperature. After stirring for 4 - 5 hrs, HPLC analysis indicated that > 97% of 4-bromo-l, 2-diaminobenzene was consumed. The reaction mass was concentrated under vacuum (600 mmHg) to remove THF at < 40 °C and the residue was diluted with ethyl acetate (40.0 L, 10.0 volume) and purified water (25.0 L, 7.0 volume). The resulting mixture was well stirred and the organic layer was separated. Subsequently, the organic layer was washed with purified water (25 L x 3, 7.0 volume) and with saturated brine solution (25 L x1, 7.0 volume) and dried over anhydrous Na2S04. The solvent was removed under high vacuum at 97% of the intermediate was consumed. AcOH was completely distilled off under high vacuum at 40 - 45 °C. The resulting syrup mass was diluted with EtOAc (50.0 L, 14.0 volume) and was purified by washing with water (25.0 L, 7.0 volume) with stirring. The organic layer was separated, washed twice with 5.0 % (w/w) aqueous NaHC03 solution (25.0 L x 2, 7.0 volume), twice with purified water (25.0 L x 2) and once with saturated brine (25 L x 1, 7.0 volume), and dried over anhydrous Na2S04. The solution was treated with active carbon before it was filtered and concentrated under vacuum (600 mrnHg) at 40 - 45 °C to give crude product as a foamy solid (5.20 kg). The residue was suspended with stirring in MTBE (5.2 L, 1.5 volume), the solid was collected by filtration, washed with MTBE (1.75 L, 0.5 volume) and dried in a vacuum tray drier at 40 - 45 °C for 12 hrs to give compound 2-2a (4.20 kg, 63% yield) as pale brown solid with a purity of > 98.0% determined by HPLC analysis. LC-MS (ESI): m/z 366.1 [M + H]+. 1H NMR (400 MHz, -DMSO): δ 12.40 (m, 1H), 7.58 - 7.70 (m, 1H), 7.37 - 7.46 (m, 1H), 7.24 (m, 1H), 4.85 - 4.94 (m, 1H), 3.54 (, 1H), 3.35 - 3.53 (m, 1H), 2.20 -2.32 (m, 1H), 1.88 - 1.96 (m, 3H), 1.38 and 0.98 (s, s, 9H) ppm.
Stage #1: 1-(tert-butoxycarbonyl)-L-proline; 4-Bromo-benzene-1,2-diamine With benzotriazol-1-ol; 1-ethyl-(3-(3-dimethylamino)propyl)-carbodiimide hydrochloride In dichloromethane at 20℃; for 19h; Stage #2: With acetic acid at 65℃; for 1.5h; M1.a EDCI-HCl (2.348 g, 12.25 mmol) was added to a mixture of 4- bromobenzene-l52-diamine (2.078 gs 11.11 mmol), N-Boc-L-proline (2.311 g, 10.74 mmol) and l-hydroxybenzotriazole (1.742 g, 12.89 mmol) in CH2Cl2 (40 mL), and stirred at ambient conditions for 19 h. The mixture was then diluted with CH2Cl2J washed with water (2x), dried (brine; MgSO4), filtered, and concentrated in vacuo to provide a brown foam. Acetic acid (40 mL) was added to the foam, and the mixture was heated at 65 0C for 90 min. The volatile component was removed in vacuo, and the residue was dissolved in EtOAc and washed carefully with saturated NaHCO3 solution (2x), and the organic phase was dried (brine; MgSO4), filtered, and concentrated in vacuo. The resultant crude material was submitted to flash chromatography (silica gel; EtOAc) to provide benzimidazole MIa as a tan foam (2.5 g). 1H NMR (DMSO-de, 6 = 2.5 ppm, 400 MHz): 12.49-12.33 (four br s, IH), 7.71 (d, J = 2, 0.54H), 7.60 (app br s, 0.46H), 7.50 (d, J = 8.6, 0.45H), 7.40 (d, J = 8.4, 0.55H), 7.26 (m, IH), 4.96-4.87 (m, IH), 3.64-3.51 (m, IH), 3.44-3.38 (m, IH), 2.38- 2.21 (m, IH), 1.99-1.85 (m, 3H), 1.39 (s, 3.7H), 1.06 (s, 5.3H). LC/MS: Anal Calcd. for [M+H]+ Ci6H2181BrN3O2: 368.03; found: 368.18.
Multi-step reaction with 2 steps 1.1: HATU; N-ethyl-N,N-diisopropylamine / N,N-dimethyl-formamide / 0.5 h / 20 °C 1.2: 16 h / 20 °C 2.1: acetic acid / 2 h / 85 °C
Stage #1: 1-(tert-butoxycarbonyl)-L-proline; 4-Bromo-benzene-1,2-diamine With 4-methyl-morpholine; HATU In N,N-dimethyl-formamide for 16h; Stage #2: In ethanol at 110 - 130℃; for 48h; Sealed tube; AK1 To a mixture of 4-Bromo-benzene-1,2-diamine (5.0 g), Boc-L-proline (6.0 g), and 4- methylmorpholine (5.88 mL) in DMF (100 mL) was added HATU (10.7 g). Reaction mixture was stirred for 16 hours and then concentrated. Residue was dissolved in ethyl acetate and washed with 5% lithium chloride solution (2x), brine and dried (MgSO4), concentrated and purified by flash column chromatography (silica gel, 30 to 60% ethyl acetate/hexanes) to a dark brown foam. Brown foam was dissolved in ethanol (100 mL) and heated in a sealed tube at 110- 130°C for 2 days. Reaction mixture was cooled and concentrated. Residue was dissolved in ethyl acetate and extracted with IN HCl (3x). Aqueous layer was basified with 50% NaOH solution to pH 10 and extracted with ethyl acetate (2x). The organic layer was dried (MgSO4), concentrated and purified by flash column chromatography (silica gel, 0 to 10% isopropanol/hexanes) to give 2-(6-Bromo-1H-benzoimidazol-2-yl)-pyrrolidine-1-carboxylic acid tert-butyl ester (6.5 g) as an off-white foam: LCMS-ESI+: calc'd for C16H2IBrN3O2: 367.26 (M+H+); Found: 365.8, 367.8 (M+H+).

Reference: [1]Current Patent Assignee: SHENZHEN DONGYANGGUANG INDUSTRIAL DEVELOPMENT CO LTD - WO2014/19344, 2014, A1 Location in patent: Paragraph 00335
[2]Current Patent Assignee: ZHANG (inventors); SHENZHEN DONGYANGGUANG INDUSTRIAL DEVELOPMENT CO LTD - EP2730572, 2015, B1 Location in patent: Page/Page column 0291-0292
[3]Current Patent Assignee: SHENZHEN DONGYANGGUANG INDUSTRIAL DEVELOPMENT CO LTD - WO2014/131315, 2014, A1 Location in patent: Page/Page column 116
[4]Current Patent Assignee: SHENZHEN DONGYANGGUANG INDUSTRIAL DEVELOPMENT CO LTD - US2015/79028, 2015, A1 Location in patent: Paragraph 0679; 0709; 0710; 0711; 0712
[5]Current Patent Assignee: PRESIDIO PHARMACEUTICALS, INC. - WO2011/156543, 2011, A2 Location in patent: Page/Page column 27; 28
[6]Current Patent Assignee: PRESIDIO PHARMACEUTICALS, INC. - WO2011/150243, 2011, A1 Location in patent: Page/Page column 143-145
[7]Current Patent Assignee: JOHNSON & JOHNSON INC - WO2011/26920, 2011, A1 Location in patent: Page/Page column 19
[8]Current Patent Assignee: JOHNSON & JOHNSON INC - WO2011/54834, 2011, A1 Location in patent: Page/Page column 30
[9]Current Patent Assignee: EVOTEC AG; PRESIDIO PHARMACEUTICALS, INC. - WO2013/123092, 2013, A1 Location in patent: Paragraph 0100
[10]Current Patent Assignee: BRISTOL-MYERS SQUIBB CO - WO2010/17401, 2010, A1 Location in patent: Page/Page column 39
[11]Current Patent Assignee: NANJING SANHOME INVESTMENT GROUP CO LTD - US2016/297804, 2016, A1
[12]Current Patent Assignee: GILEAD SCIENCES INC - WO2010/132601, 2010, A1 Location in patent: Page/Page column 482
  • 2
  • [ 15761-39-4 ]
  • [ 1575-37-7 ]
  • [ 1208007-67-3 ]
YieldReaction ConditionsOperation in experiment
81% Stage #1: 1-(tert-butoxycarbonyl)-L-proline; 4-Bromo-benzene-1,2-diamine With N-ethyl-N,N-diisopropylamine; N-[(dimethylamino)-3-oxo-1H-1,2,3-triazolo[4,5-b]pyridin-1-yl-methylene]-N-methylmethanaminium hexafluorophosphate In tetrahydrofuran at 0 - 20℃; for 3.5h; Stage #2: With acetic acid at 40℃; 3.4 To a solution of compound C-2 (20 g, 93 mmol), compound C-1 (19.1 g, 102 mmol) and HATU (38.9 g, 102mmol) in THF (500 mL) in an ice bath was added DIPEA (20.5 mL, 118 mmol). The mixture was stirred in the ice bathfor 0.5 hour and at rt for 3 hours. The resulting mixture was quenched with water. THF was removed in vacuo. Theresulting mixture was extracted with EtOAc (150 mL x 3). The combined organic phases were dried over anhydrousNa2SO4 and concentrated in vacuo. The residue was used for the next step without further purification. A solution of theabove residue in glacial acetic acid (100 mL) was stirred at 40 °C overnight, basified with NaHCO3 and extracted withEtOAc (150 mL x 3). The combined organic phases were dried over anhydrous Na2SO4 and concentrated in vacuo. Theresidue was purified by silica gel column chromatography (PE/EtOAc (v/v) = 2/1) to give compound C-3 (27.6 g, 81%).The compound was characterized by the following spectroscopic data:1H NMR (400 MHz, CDCl3): δ 7.68 (s, 1H), 7.42-7.40 (m, 1H), 7.30-7.28 (m, 1H), 5.11-5.09 (m, 1H), 3.45-3.43 (m,2H), 2.94-2.93 (m, 1H), 2.21-2.18 (m, 2H), 2.01-1.91 (m, 1H), 1.49 (s, 9H).
6% Stage #1: 1-(tert-butoxycarbonyl)-L-proline; 4-Bromo-benzene-1,2-diamine With 1-ethyl-(3-(3-dimethylamino)propyl)-carbodiimide hydrochloride In dichloromethane at 20℃; for 2h; Stage #2: With acetic acid In dichloromethane at 40℃; for 2h; 31 Preparation of compound 81. To a solution of Boc-Pro-OH (10.68 mmol) in DCM were added EDCI (11.73mmol) and 4-bromo-1,2-diaminobenzene (10.69 mmol). The reaction was completed after 2 hrs at room temperature.Dichloromethane (30 mL) was added and the mixture was washed with water. The aqueous phase was extracted withdichloromethane and the combined organics were evaporated in vacuo. The crude was chromatographied to give amixture of bis-acylated analogues. This mixture was heated in acetic acid (14 mL) at 40 °C for 2 hrs. Once cooled,saturated Na2CO3 solution was carefully added to adjust the mixture to pH ∼8. The mixture was extracted with ethylacetate and the organic layers were washed with saturated NaHCO3 solution and water, dried over Na2SO4, and decolourizedwith activate charcoal. The mixture was filtered and concentrated in vacuo. The residue was purified by silicagel chromatography (eluent: DCM to DCM/ MeOH 2%) to give compound 81 as an white solid in 6% yield. MS (ESI,EI+) m/z = 368 (MH+).
Stage #1: 1-(tert-butoxycarbonyl)-L-proline With chloroformic acid ethyl ester; triethylamine In tetrahydrofuran at -20℃; for 0.5h; Stage #2: 4-Bromo-benzene-1,2-diamine In tetrahydrofuran at -20 - 20℃; Stage #3: With acetic acid at 50℃; for 2h; 1-1.1a; 1-1.1b; 2-1a.1a-a; 2-1a.1a-b; 3-335.335a; 3-335.335b Example 1-1.Step Ia. A mixture of JV-Boc-L-proline (5.754 g, 26.7 mmol) and TEA (3.73 niL, 26.7 mmol) in THF (60 mL) at -20 0C was treated with ethyl chloroformate (2.55 mL, 26.7 mmol) for 30 minutes before a slow addition of 4-bromo-l,2-diaminobenzene (5.00 g, 26.7 mmol) in THF (20 mL). It was then kept at -20 0C for 1 hour and then slowly warmed up to rt and stirred at rt overnight. The volatiles were evaporated and the residue was partitioned (EtOAc - water). The organics were washed with brine, dried (Na2SO4), filtered and evaporated to give the crude desired compound as a dark brown foam (10.7 g). ESIMS m/z = 384.18, 386.18 [M+H]+. Step Ib. A solution of the crude compound from step Ia (10.7 g, theo. 26.7 mmol) in glacial acetic acid (100 mL) was heated at 50 0C for 2 hours. The volatiles were evaporated off and the residue was partitioned (EtOAc - saturated aqueous NaHCOs). The organics were washed with brine, dried (Na2SO4), filtered and evaporated. The residue was purified by flash column chromatography (silica, hexanes-ethyl acetate) to give the desired compound as a brown foam (5.78 g, 59%). ESIMS m/z = 366.17, 368.17 [M+H]+. 1H NMR (CDCl3) 10.96, 10.93 (2 s, IH), 7.81, 7.30 (2 s, IH), 7.53, 7.17 (2d, J= 8.5 Hz,PAGE 98 OF 191 IH), 7.23, 7.03 (2d, J= 8.5 Hz, IH), 5.09, 5.07 (2s, IH), 3.42-3.49 (m, 2H), 2.75-2.85 (m, IH), 2.13-2.23 (m, 2H), 1.97-2.00 (m, IH), 1.48 (s, 9H).
Stage #1: 1-(tert-butoxycarbonyl)-L-proline; 4-Bromo-benzene-1,2-diamine With benzotriazol-1-ol; 1-ethyl-(3-(3-dimethylamino)propyl)-carbodiimide hydrochloride In dichloromethane at 20℃; for 19h; Stage #2: With acetic acid at 65℃; for 1.5h; J.10 EDCI'HCl (2.35 g, 12.25 mmol) was added to a mixture of 4-bromobenzene- 1,2-diamine (2.078 g, 1 1.1 1 mmol), N-Boc-L-proline (2.31 1 g, 10.74 mmol) and 1- hydroxybenzotriazole (1.742 g, 12.89 mmol) in dichloromethane (40 mL), and stirred at ambient conditions for 19 h. The mixture was then diluted with dichloromethane, washed with water (2x), dried (brine; MgSC^), filtered, and concentrated in vacuo to provide a brown foam. Acetic acid (40 mL) was added to the foam, and the mixture was heated at 65 °C for 90 min. The volatile component was removed in vacuo, and the residue was dissolved in ethyl acetate and washed carefully with saturated aHC03 solution (2x), and the organic phase was dried (brine; MgSC^), filtered, and concentrated in vacuo. The resultant crude material was submitted to flash chromatography (silica gel; ethyl acetate) to provide J.10 as a tan foam (2.5 g). lH NMR (DMSO-d6, δ = 2.5 ppm, 400 MHz): 12.49-12.33 (four br s, IH), 7.71 (d, J = 2, 0.54H), 7.60 (app br s, 0.46H), 7.50 (d, J = 8.6, 0.45H), 7.40 (d, J = 8.4, 0.55H), 7.26 (m, IH), 4.96-4.87 (m, IH), 3.64-3.51 (m, IH), 3.44-3.38 (m, IH), 2.38-2.21 (m, IH), 1.99-1.85 (m, 3H), 1.39 (s, 3.7H), 1.06 (s, 5.3H). (Cond.-D2) LC/MS: Anal. Calcd. for [M+H]+ Ci6H21Br 302: 368.03; found: 368.18.
Stage #1: 1-(tert-butoxycarbonyl)-L-proline With chloroformic acid ethyl ester; triethylamine In tetrahydrofuran at -20℃; for 0.5h; Stage #2: 4-Bromo-benzene-1,2-diamine In tetrahydrofuran at -20 - 20℃; Stage #3: With acetic acid at 50℃; for 2h; 1-1.1-1a; 1-1.1-1b Step 1-la. A mixture of N-Boc-L-proline (5.754 g, 26.7 mmol) and TEA (3.73 mL, 26.7 mmol) in THF (60 mL) at -20 0C was treated with ethyl chloroformate (2.55 mL, 26.7 mmol) for 30 minutes before a slow addition of 4-bromo- 1 ,2- diaminobenzene (5.00 g, 26.7 mmol) in THF (20 mL). It was then kept at -20 0C for 1 hour and then slowly warmed up to rt and stirred at rt overnight. The volatiles were evaporated and the residue was partitioned (EtOAc - water). The organics were washed with brine, dried (Na2SO4), filtered and evaporated to give the crude desired compound as a dark brown foam (10.7 g). ESIMS m/z = 384.18, 386.18 [M+H]+. Step 1-lb. A solution of the crude compound from step 1-la (10.7 g, 26.7 mmol at most) in glacial acetic acid (100 mL) was heated at 50 0C for 2 hours. The volatiles were evaporated off and the residue was partitioned (EtOAc - aqueous NaHCOs). The organics were washed with brine, dried (Na2SO4), filtered and evaporated. The residue was purified by chromatography (silica, hexanes-ethyl acetate) to give the desired compound as a brown foam (5.78 g, 59%). ESIMS m/z = 366.17, 368.17 [M+H]+. 1H NMR (CDCl3) 10.96, 10.93 (2 s, IH), 7.81, 7.30 (2 s, IH), 7.53, 7.17 (2d, J= 8.5 Hz, IH), 7.23, 7.03 (2d, J= 8.5 Hz, IH), 5.09, 5.07 (2s, IH), 3.42-3.49 (m, 2H), 2.75-2.85 (m, IH), 2.13-2.23 (m, 2H), 1.97-2.00 (m, IH), 1.48 (s, 9H).
5.78 g Stage #1: 1-(tert-butoxycarbonyl)-L-proline With chloroformic acid ethyl ester; triethylamine In tetrahydrofuran at -20℃; for 0.5h; Stage #2: 4-Bromo-benzene-1,2-diamine In tetrahydrofuran at -20 - 20℃; Stage #3: With acetic acid at 50℃; for 2h; 1.1a; 1.1b Step 1a. A mixture of N-Boc-L-proline (5.754 g, 26.7 mmol) and TEA (3.73 mL, 26.7 mmol) in THF (60 mL) at -20° C. was treated with ethyl chloroformate (2.55 mL, 26.7 mmol) for 30 minutes before a slow addition of 4-bromo-1,2-diaminobenzene (5.00 g, 26.7 mmol) in THF (20 mL). It was then kept at -20° C. for 1 hour and then slowly warmed up to rt and stirred at rt overnight. The volatiles were evaporated and the residue was partitioned (EtOAc-water). The organics were washed with brine, dried (Na2SO4), filtered and evaporated to give the crude desired compound as a dark brown foam (10.7 g). ESIMS m/z=384.18, 386.18 [M+H]+.; Step 1b. A solution of the crude compound from step 1a (10.7 g, 26.7 mmol at most) in glacial acetic acid (100 mL) was heated at 50° C. for 2 hours. The volatiles were evaporated off and the residue was partitioned (EtOAc-aqueous NaHCO3). The organics were washed with brine, dried (Na2SO4), filtered and evaporated. The residue was purified by chromatography (silica, hexanes-ethyl acetate) to give the desired compound as a brown foam (5.78 g, 59%). ESIMS m/z=366.17, 368.17 [M+H]-. 1H NMR (CDCl3) 10.96, 10.93 (2 s, 1H), 7.81, 7.30 (2 s, 1H), 7.53, 7.17 (2d, J=8.5 Hz, 1H), 7.23, 7.03 (2d, J=8.5 Hz, 1H), 5.09, 5.07 (2s, 1H), 3.42-3.49 (m, 2H), 2.75-2.85 (m, 1H), 2.13-2.23 (m, 2H), 1.97-2.00 (m, 1H), 1.48 (s, 9H).

  • 3
  • [ 1208007-67-3 ]
  • [ 4612-26-4 ]
  • [ 1239649-51-4 ]
YieldReaction ConditionsOperation in experiment
55% With potassium carbonate;dichloro(1,1'-bis(diphenylphosphanyl)ferrocene)palladium(II)*CH2Cl2; In 1,2-dimethoxyethane; water; at 100℃; for 2h; 1 ,1 -dimethylethyl(2S)-2-(5-bromo-1 H-benzimidazol-2-yl)-1 -pyrrolidinecarboxylate (intermediate 45a) (5.00g, 12.76 mmol), benzene-1 ,4-diyldiboronic acid 3 (1 .057 g, 6.38 mmol), PdCI2(dppf)-CH2CI2 adduct (0.512 g, 0.638 mmol), potassium carbonate (2.76 g, 20 mmol) in 1 ,2-dimethoxyethane (30 mL) and water (10 mL) were heated in an oil bath at 100°C for 2 hours. The sample was filtered through celite and washed with DCM. The sample was concentrated and the residue partitioned between DCM and water, the organic layer dried with MgSO^ filtered and concentrated. The residue was chromatographed on a silica using 0-5percent (2N NH3 in MeOH) in DCM. Fractions were concentrated to yield bis(1, 1- dimethylethyl) (2S,2'S)-2,2'-[benzene-1 -diylbis(1H-benzimidazole-5,2-diyl)]di pyrrolidinecarboxylate) (2.50 g, yield 55percent) as an orange solid. 1H NMR (400 MHz, DMSO-c/e) delta ppm 12.03 (br. s., 2 H) 7.83 - 7.89 (m, 1 H) 7.75 (s, 5 H) 7.61 (s, 1 H) 7.52 (br. s., 3 H) 4.99 (br. s., 2 H) 3.79 (td, J=3.4, 1 .6 Hz, 1 H) 3.61 (br. s., 2 H) 3.48 (dt, J=10.2, 7.1 Hz, 2 H) 3.20 (d, J=5.3 Hz, 2 H) 2.34 (br. s., 2 H) 2.05 (d, J=5.9 Hz, 4 H) 1 .93 (d, J=7.1 Hz, 2 H) 1 .28 (br. s., 18 H). ES LC-MS m/z =672.2 (M+H).Intermediate 5
23% With sodium carbonate;tetrakis(triphenylphosphine) palladium(0); In ethanol; water; toluene;Reflux; Inert atmosphere; Step Ic. A mixture of the compound from step Ib (0.500 g, 1.37 mmol), benzene-1,4- diboronic acid (0.103 g, 0.621 mmol) and Pd(PPh3)4 (35.8 mg, 31.0 mumol) in ethanol (6 mL), toluene (6 mL) and aqueous Na2CO3 (2 M, 0.4 mL) was degassed and heated to reflux under N2 overnight. The volatiles were evaporated and the residue was partitioned (EtOAc - saturated aqueous NaHCO3). The organics were washed with brine, dried (Na2SO4), filtered and evaporated. The residue was purified by flash column chromatography (silica, hexanes-ethyl acetate) to give the title compound as a yellow solid (0.158 g, 23percent). ESIMS m/z = 649.50 [M+H]+.
  • 4
  • [ 1208007-67-3 ]
  • [ 99770-93-1 ]
  • [ 1256385-57-5 ]
YieldReaction ConditionsOperation in experiment
With potassium carbonate;tetrakis(triphenylphosphine) palladium(0); In 1,2-dimethoxyethane; water; at 120℃; for 0.5h;Microwave irradiation; A mixture 2-(6-Bromo-1H-benzoimidazol-2- yl)-pyrrolidine-1-carboxylic acid tert-butyl ester (0.257 g), 1,4-benzenediboronic acid, pinacol ester (1.158 g), Pd(PPh3)4 (0.041 g) and potassium carbonate (0.485 g) in H2O (2.0 mL)/dimethoxyethane (5.0 mL) was heated in microvave at 120C for 30 minutes. Reaction mixture was cooled and diluted with ethyl acetate, washed with brine, dried (MgSO4), concentrated and purified by flash column chromatography (silica gel, 20 to 70% ethyl acetate/hexanes) to give 2-{6-[4-(4,4,5,5-Tetramethyl-[1,3,2]dioxaborolan-2-yl)-phenyl]-1H- benzoimidazol-2-yl} -pyrrolidine- 1-carboxylic acid tert-butyl ester (0.187 g): LCMS-ESI+: calc'd for C28H37BN3O4: 490.42 (M+H+); Found: 490.0 (M+H+).
  • 5
  • [ 1208007-67-3 ]
  • [ 444120-91-6 ]
  • [ 1352212-48-6 ]
YieldReaction ConditionsOperation in experiment
With potassium phosphate;tris-(dibenzylideneacetone)dipalladium(0); tricyclohexylphosphine; In 1,4-dioxane; water; at 110℃; for 6h; Preparation 23: fert-Butyl (2S)-2-[5-(6-chloropyridin-3-yl)-1 H-benzimidazol-2-yl]pyrrolidine-1 - carboxylateTo ieri-butyl (2S)-2-(5-bromo-1 H-benzimidazol-2-yl)pyrrolidine-1-carboxylate obtained from Preparation 6 (187 mg, 0.510 mmol) and 2-chloro-5-pyridine boronic acid (88 mg, 0.561 mmol) in 1 ,4-dioxane (2 mL), were added Pd2(dba)3 (5 mg, 0.005 mmol) and tricyclohexylphosphine (4 mg, 0.012 mmol). A solution of potassium phosphate (184 mg, 0.867 mmol) in water (683 uL) was added and the resulting reaction mixture was heated at 1 10 C for 16 hours. After this time, the suspension formed was cooled to room temperature and the solvent evaporated under reduced pressure. The crude residue was purified by flash chromatography (heptane : ethyl acetate, 70:30 to 20:80) to give the title compound as a white solid (143 mg).LCMS (run time = 2 minutes, System A): Rt = 1.29 minutes; m/z 399, 401 [MH+]H NMR (400 MHz, CDCI3): delta = 8.64 (d, 1 H), 7.87 (dd, 1 H), 7.76-7.66 (br, 2H), 7.42 (s, 1 H), 7.40 (d, 1 H), 5.15 (dd, 1 H), 3.47-3.44 (m, 2H), 3.09-3.02 (m, 1.5H), 2.08-2.01 (m, 1.5H), 1.53 (s, 9H).
  • 6
  • [ 1208007-67-3 ]
  • [ 1303533-81-4 ]
YieldReaction ConditionsOperation in experiment
Multi-step reaction with 4 steps 1.1: (1,1'-bis(diphenylphosphino)ferrocene)palladium(II) dichloride; sodium hydrogencarbonate / water; 1,2-dimethoxyethane / 80 °C / Inert atmosphere; Large scale 2.1: hydrogenchloride / isopropyl alcohol / 18 - 30 °C / Inert atmosphere 3.1: N-ethyl-N,N-diisopropylamine / acetonitrile / 0.17 h 3.2: 0.5 h / 2 °C 3.3: 4.5 h / 3 - 25 °C 4.1: hydrogenchloride / ethanol / 0.33 h / 20 - 25 °C / Inert atmosphere; Large scale
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