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CAS No. : | 17136-36-6 | MDL No. : | MFCD00190772 |
Formula : | C9H11NO2 | Boiling Point : | - |
Linear Structure Formula : | - | InChI Key : | KGSVNOLLROCJQM-UHFFFAOYSA-N |
M.W : | 165.19 | Pubchem ID : | 86965 |
Synonyms : |
|
Num. heavy atoms : | 12 |
Num. arom. heavy atoms : | 6 |
Fraction Csp3 : | 0.22 |
Num. rotatable bonds : | 4 |
Num. H-bond acceptors : | 3.0 |
Num. H-bond donors : | 2.0 |
Molar Refractivity : | 45.6 |
TPSA : | 49.33 Ų |
GI absorption : | High |
BBB permeant : | Yes |
P-gp substrate : | No |
CYP1A2 inhibitor : | No |
CYP2C19 inhibitor : | No |
CYP2C9 inhibitor : | No |
CYP2D6 inhibitor : | No |
CYP3A4 inhibitor : | No |
Log Kp (skin permeation) : | -8.29 cm/s |
Log Po/w (iLOGP) : | 1.34 |
Log Po/w (XLOGP3) : | -1.39 |
Log Po/w (WLOGP) : | 0.71 |
Log Po/w (MLOGP) : | -1.11 |
Log Po/w (SILICOS-IT) : | 1.1 |
Consensus Log Po/w : | 0.13 |
Lipinski : | 0.0 |
Ghose : | None |
Veber : | 0.0 |
Egan : | 0.0 |
Muegge : | 1.0 |
Bioavailability Score : | 0.55 |
Log S (ESOL) : | -0.09 |
Solubility : | 133.0 mg/ml ; 0.805 mol/l |
Class : | Very soluble |
Log S (Ali) : | 0.86 |
Solubility : | 1180.0 mg/ml ; 7.17 mol/l |
Class : | Highly soluble |
Log S (SILICOS-IT) : | -2.62 |
Solubility : | 0.394 mg/ml ; 0.00238 mol/l |
Class : | Soluble |
PAINS : | 0.0 alert |
Brenk : | 0.0 alert |
Leadlikeness : | 1.0 |
Synthetic accessibility : | 1.0 |
Signal Word: | Warning | Class: | N/A |
Precautionary Statements: | P261-P280-P305+P351+P338 | UN#: | N/A |
Hazard Statements: | H302-H315-H319-H332-H335 | Packing Group: | N/A |
GHS Pictogram: |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
100% | With thionyl chloride In methanol at 0℃; for 18 h; | To a stirred solution of N-benzylglycine (820 mg, 4 mmol) and methanol (8 mL) was added thionyle chloride (2 mL) dropwise at 0 °C. The mixture was stirred for 18 h. Then the solvent was evaporated under reduced pressure to give the compound benzylamino-acetic acid methyl ester as a white solid. Yield 100percent. 1H NMR (DMSO-d6) δ ppm: 7.55-7.58 (m, 2H), 7.41-7.43 (m, 3H), 4.16 (s, 2H), 3.99 (s, 2H), 1.72 (s, 3H). tR,LCMS = 2.01 min; Purity 99percent; MS (ESI+): m/z = 180 (M + H)+. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
40.70 g | for 6.5 h; | To a suspension of /V-benzylglycine (24.3 g, 147 mmol) in THF:water (1 :1 , 500 mL) was added Boc-anhydride (33.7 g, 154 mmol). After 6.5 h the mixture was diluted with TBME (250 mL) and citric acid (33 g) was added until pH = 4. After 10 min of stirring, the phases were separated and the organic phase was washed with brine (250 ml). The aqueous layer was washed with TBME (2x100 ml) and the combined organic phases were dried over Na2S04, filtered then concentrated in vacuo (45°C), affording the title compound (40.70 g) as a colorless oil, which began to crystallize upon standing. HPLC: 99.7percent by UV, LCMS: Rt = 0.94 min, m/z = 264.3 (M-H), Method LCMS_ 2_MIN_FINAL_ANALYSIS. 1H NMR (600 MHz, DMSO-c/6)* δ 12.62 (br s, 1 H), 7.44-7.09 (m, 5 H), 4.41 (d, J = 8.1 Hz, 2 H) 1 .44-1 .24 (m, 9 H) 3.89-3.67 (m, 2 H). *As a mixture with 0(Boc)2 (ca. 9percent). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With lithium hydroxide monohydrate; NaNO2 | ||
With hydrogenchloride; NaNO2 | ||
With hydrogenchloride; NaNO2 |
With hydrogenchloride; NaNO2 for 2h; | ||
With hydrogenchloride; NaNO2 In lithium hydroxide monohydrate at 0℃; for 1h; | ||
With isopentyl nitrite In 1,2-dimethoxyethane at 20℃; for 3h; | ||
With isopentyl nitrite In 1,2-dimethoxyethane at 30℃; for 2h; | 217.217F Example 217F: 3-benzyl-3H-1,2,3-oxadiazol-1-ium-5-olate Behind a blast shield, to a solution of 2-(benzylamino)acetic acid (250 mg, 1.51 mmol) in 1,2-dimethoxyethane (7.0 mL) under nitrogen was added isoamyl nitrite (0.204 mL, 1.51 mmol). The reaction mixture stirred for 2 hours and was concentrated in vacuo (water bath at 30 °C to prevent decomposition). The crude residue was dispersed in dichloromethane:isohexane (1:15), concentrated in vacuo, and triturated using isohexane to afford 2-(benzyl(nitroso)amino)acetic acid. | |
With isopentyl nitrite In 1,2-dimethoxyethane for 2h; Inert atmosphere; | 217F Example 217F: 3-benzyl-3H-1,2,3-oxadiazol-1-ium-5-olate Behind a blast shield, to a solution of 2-(benzylamino)acetic acid (250 mg, 1.51 mmol) in 1,2-dimethoxyethane (7.0 mL) under nitrogen was added isoamyl nitrite (0.204 mL, 1.51 mmol). The reaction mixture stirred for 2 hours and was concentrated in vacuo (water bath at 30 °C to prevent decomposition). The crude residue was dispersed in dichloromethane:isohexane (1:15), concentrated in vacuo, and triturated using isohexane to afford 2-(benzyl(nitroso)amino)acetic acid. Behind a blast shield, to a solution of 2-(benzyl(nitroso)amino)acetic acid (294 mg, 1.51 mmol) in dichloromethane (7.00 mL) at 0 °C under nitrogen was added trifluoroacetic anhydride (0.214 mL, 1.51 mmol) dropwise. The reaction mixture was warmed to ambient temperature and stirred for 1.5 hours. Then water (7 mL) was added and the excess trifluoroacetic anhydride was quenched with sodium hydrogen carbonate. The phases were separated, and the aqueous layer was further extracted with dichloromethane (10 mL). The combined organic layers were dried over Na2SO4, filtered, and concentrated in vacuo to afford a crude amorphous solid, which was dispersed in dichloromethane:isohexane (1:15). This solution was then concentrated in vacuo to afford the title intermediate (202 mg, 1.03 mmol, 68% yield). 1H NMR (500 MHz, CDCl3) δ ppm 7.47 (dd, J = 5.0, 2.0 Hz, 3H), 7.41 - 7.35 (m, 2H), 6.17 (s, 1H), 5.35 (s, 2H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
93% | With phosphorus pentachloride In toluene at 20℃; for 6h; | 5 Example 5: Synthesis of the compound of formula (IV) in which R2 is hydrogen and X is chlorine To a suspension of PCI5 ( 1.51 g, 7.25 mmol) in Toluene (30 ml, 30 V) was added benzyl-glycine (1 g, 6.05 mmol). The reaction mixture was stirred at r.t. for 6h. To the obtained reaction mixture was filtered and the obtained solid was washed with DCM (10 ml_) for two times. The obtaining solid was dried on vacuum to give product (IV) hydrochloride salt (1.25 g, 93% yield) as a white solid. |
With phosphorus pentachloride; acetyl chloride |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
99% | With hydrogenchloride In 1,4-dioxane | 9.1 Step 1 : Methyl 2-(benzylamino)acetate hydrochloride (27). To a N-benzyl glycine 26 (500 mg, 3.0 mmol) in MeOH (6 mL) was added 4M solution of HCl in dioxane (4 mL) and stirred overnight. The reaction mixture was concentrated to afford compound 27 (649mg, 99%) as a white solid. The crude compound was carried forward without further purification. LRMS (ESI): (calc) 179.2 (found) 180.1(MH)+. |
With thionyl chloride | ||
With hydrogenchloride In 1,4-dioxane at 20℃; for 20h; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With formic acid | ||
In formic acid at 70℃; for 5h; | To a stirred solution of 2-(benzylamino)acetic acid (2.0 g, 12.1 mmol) in formic acid (91 mL) was added formaldehyde (6.94 mL, 93.2 mmol). After five hours at 70° C., the reaction mixture was concentrated under reduced pressure to 20 mL and a white solid precipitated. Following filtration, the mother liquors were collected and further concentrated under reduced pressure providing the crude product. Purification by reverse-phase preparative HPLC (Xterra 30×100 mm, detection at 220 nm, flow rate 35 mL/min, 0 to 35% B over 8 min; A=90% water, 10% methanol, 0. 1% TFA, B=10% water, 90% methanol, 0. 1% TFA) provided the title compound 2-(benzyl(methyl)-amino)acetic acid as its TFA salt (723 mg, 33%) as a colorless wax. 1H NMR (300 MHz, DMSO-d6) δ ppm 2.75 (s, 3H) 4.04 (s, 2H) 4.34 (s, 2H) 7.29-7.68 (m, 5H). LCMS: Anal. Calcd. for: C10H13NO2 179.22; Found: 180.20 (M+H)+. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With ammonium hydroxide | ||
Stage #1: N-benzylglycine With sodium chloride In water at 20℃; for 0.166667h; Stage #2: CYANAMID With ammonia In water at 20℃; for 97h; | 1 Example 1. Production of phenylcreatine N-benzylglycine weighing 429 mg, and 0.5 ml of distilled water were mixed in a round-bottom flask of 10 ml volume. Then 152 mg of NaC1 were added to the mixture. Further, using a magnetic stirrer the mixture was stirred at room temperature for 10 minutes. In a small glass 206 mg of cyanamide and 0.2 ml of distilled water were added. Then a drop of solution of ammonia was added in catalytic quantities. The mixture was quickly mixed by gentle inverting, and then a mixture of cyanamide was added to a mixture of N-benzylglycine. The resulting mixture was stirred for one hour at room temperature. After 96 hours of incubation at room temperature and normal atmospheric pressure the product, namely phenylcreatine, N-benzyl-N-carbamimidoyl glycine, was precipitated. The crystals were transferred to a clean container with a volume of 10 ml.Purification of the sample was performed by recrystallization with the use of 1-2 ml of boiling distilled water. Then the solution was cooled to until its temperature became a room one. Then the solution was cooled on an ice bath for five minutes and dried in vacuum.The product was received also by incubation at higher temperatures up to 65°C, it was crystallized after from 24 hours to a week. If phenylcreatine remained in the solution, the solution was filtered until the dry crystals of the substance were discovered, vacuum filtration was used. The output of phenylcreatine ultimately amounted to 65-80%. Mass spectrum, found: mlz: MYR 207.2. Calculated: M 209. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
100% | With thionyl chloride; In methanol; at 0℃; for 18h; | To a stirred solution of N-benzylglycine (820 mg, 4 mmol) and methanol (8 mL) was added thionyle chloride (2 mL) dropwise at 0 C. The mixture was stirred for 18 h. Then the solvent was evaporated under reduced pressure to give the compound benzylamino-acetic acid methyl ester as a white solid. Yield 100%. 1H NMR (DMSO-d6) delta ppm: 7.55-7.58 (m, 2H), 7.41-7.43 (m, 3H), 4.16 (s, 2H), 3.99 (s, 2H), 1.72 (s, 3H). tR,LCMS = 2.01 min; Purity 99%; MS (ESI+): m/z = 180 (M + H)+. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
100% | In benzene at 55℃; | |
In benzene at 55℃; for 2h; Yield given; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With hydrogenchloride In water for 1h; Heating; | ||
With hydrogenchloride; sodium hydroxide 1.) aq. EtOH, r.t., 1 h: 2.) pH 7; Multistep reaction; | ||
With sodium hydroxide for 0.666667h; Heating; |
With sodium hydroxide In methanol at 20℃; for 0.5h; | ||
Multi-step reaction with 2 steps 2: aq. NaOH | ||
With hydrogenchloride; sodium hydroxide In water | 9 EXAMPLE 9 EXAMPLE 9 Ethyl N-benzlglycinate is saponified in situ. An aqueous 30% strength NaOH solution (0.5 l=5 moles) and water (1 l) are mixed into this solution, ethyl N-benzylglycinate (965 g) is poured gradually over one hour. The temperature rises to 45° C. The ethanol is distilled off, the residue is cooled and a 6N aqueous hydrochloric acid solution (0.82 l) is added. The N-benzylglycine precipitates. | |
In water | 1.d d) d) N-Benzylglycine STR16 225.8 g (1.17 mol) of N-benzylglycine ethyl ester (J. Am. Chem. Soc. 72, 1238 (1950)) are heated under reflux overnight in 600 ml of water. Product which has crystallized out is filtered off with suction and the filtrate is extracted once with tert.-butyl methyl ether. The aqueous phase is concentrated and the crystals obtained are dried over phosphorus pentoxide in a desiccator together with the product filtered off. Yield: 184 g (95% of theory). Melting point: 199° C. | |
With sodium hydroxide In 1,4-dioxane; methanol at 20℃; for 0.5h; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With hydrogenchloride; triethylamine; In dichloromethane; | 10A. (Benzyl-tert-butoxycarbonyl-amino)-acetic acid To 2-(benzylamino)acetic acid, HCl (3 g, 14.88 mmol) in DCM (40 mL) was added di-tert-butyl dicarbonate (3.25 g, 14.88 mmol) and TEA (6.22 mL, 44.6 mmol) and stirred for 6 days. The reaction was partitioned with DCM/dil HCl and extracted with DCM (3*20 mL). Combined organic layers were washed with water (20 mL), brine (20 mL) and dried (MgSO4) to afford 10A and containing some triethylamine hydrochloride impurity (5 g, 125%) as a clear colorless oil. 1H NMR (400 MHz, CDCl3) delta 1.38-1.46 (d, 9H), 3.71 (s, 1H), 3.86 (s, 1H), 4.54 (d, J=12.38 Hz, 2H), 7.07-7.37 (m, 5H). Used without further purification. | |
40.70 g | In tetrahydrofuran; water; for 6.5h; | To a suspension of /V-benzylglycine (24.3 g, 147 mmol) in THF:water (1 :1 , 500 mL) was added Boc-anhydride (33.7 g, 154 mmol). After 6.5 h the mixture was diluted with TBME (250 mL) and citric acid (33 g) was added until pH = 4. After 10 min of stirring, the phases were separated and the organic phase was washed with brine (250 ml). The aqueous layer was washed with TBME (2x100 ml) and the combined organic phases were dried over Na2S04, filtered then concentrated in vacuo (45C), affording the title compound (40.70 g) as a colorless oil, which began to crystallize upon standing. HPLC: 99.7% by UV, LCMS: Rt = 0.94 min, m/z = 264.3 (M-H), Method LCMS_ 2_MIN_FINAL_ANALYSIS. 1H NMR (600 MHz, DMSO-c/6)* delta 12.62 (br s, 1 H), 7.44-7.09 (m, 5 H), 4.41 (d, J = 8.1 Hz, 2 H) 1 .44-1 .24 (m, 9 H) 3.89-3.67 (m, 2 H). *As a mixture with 0(Boc)2 (ca. 9%). |
With triethylamine; In water; for 3h; | FIG. 7 - Step F. A 500-mL round-bottom flask was charged with N- benzylglycine (10.0 mmol), a water solution (100 mL) containing triethylamine (4.18 mL, 30.0 mmol, 3 equiv.; FW: 101.19 g/mol), and a teflon-coated stir bar. Di-/er/-butyl dicarbonate (2.18 g, 10.0 mmol, 1 equiv.; FW: 218.25 g/mol) was added and the solution was stirred for 3 h. The reaction mixture was poured into aqueous HC1 (1N, 30 mL) and extracted with ethyl acetate (3X100 mL). The organic layer was washed with water (1X100 mL) and brine (2X50 mL), dried over MgS04, filtered, and concentrated under reduced pressure to obtain product as white solid (93%). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With hydrogen In methanol for 12h; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
82% | With potassium <i>tert</i>-butylate In tetrahydrofuran at 0℃; for 1h; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
91% | With triethylamine In 1,2-dichloro-ethane at 170℃; for 0.0833333h; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
84% | With triethylamine In 1,2-dichloro-ethane at 170℃; for 0.0833333h; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
90% | With triethylamine In 1,2-dichloro-ethane at 170℃; for 0.0833333h; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
100% | With sodium hydroxide In tetrahydrofuran; water at 20℃; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
70.3% | In toluene at 105℃; for 18h; Heating / reflux; | 1.1 Fumaric acid diethylester (21.6 g; 0.126 mol) is dissolved in toluene (900 ml) and heated at 105 °C. A mixture of N-benzylglycine (25 g; 0.151 mol) and paraformaldehyde (25.36 g; 0.844 mol) is added in 4 g portions to the refluxing solution. After completion of the addition the mixture is heated for 18 h at 105°C. The mixture is then evaporated to dryness and suspended in n-hexane. The insoluble material is filtered off and the remaining solution is evaporated to dryness. The crude product is used for the next step without further purification. Yield: 32.5 g (70.3 %), ESI-MS : m/z = 306 [M+H]+ |
In toluene Heating; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
95% | Stage #1: N-benzylglycine With magnesium oxide In water at 25℃; for 4h; Stage #2: N-phthaloylglycine chloride In 1,4-dioxane; water at 25℃; for 2h; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
88% | In toluene at 110℃; for 8h; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
79% | With triethylamine In chloroform for 18h; Heating; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 5 steps 1: 98 percent / Et3N / H2O / 3 h / 25 °C 2: 96 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 3: 94 percent / TFA / CH2Cl2 / 4 h / 25 °C 4: 100 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 5: 96 percent / TFA / CH2Cl2 / 4 h / 25 °C | ||
Multi-step reaction with 3 steps 1: 98 percent / Et3N / H2O / 3 h / 25 °C 2: 100 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 3: 96 percent / TFA / CH2Cl2 / 4 h / 25 °C |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 7 steps 1: 98 percent / Et3N / H2O / 3 h / 25 °C 2: 96 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 3: 94 percent / TFA / CH2Cl2 / 4 h / 25 °C 4: 100 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 5: 96 percent / TFA / CH2Cl2 / 4 h / 25 °C 6: 97 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 7: 96 percent / TFA / CH2Cl2 / 4 h / 25 °C | ||
Multi-step reaction with 5 steps 1: 98 percent / Et3N / H2O / 3 h / 25 °C 2: 100 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 3: 96 percent / TFA / CH2Cl2 / 4 h / 25 °C 4: 97 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 5: 96 percent / TFA / CH2Cl2 / 4 h / 25 °C | ||
Multi-step reaction with 3 steps 1: 98 percent / Et3N / H2O / 3 h / 25 °C 2: 97 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 3: 96 percent / TFA / CH2Cl2 / 4 h / 25 °C |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 6 steps 1: 98 percent / Et3N / H2O / 3 h / 25 °C 2: 96 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 3: 94 percent / TFA / CH2Cl2 / 4 h / 25 °C 4: 100 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 5: 96 percent / TFA / CH2Cl2 / 4 h / 25 °C 6: 97 percent / EEDQ / CH2Cl2 / 3 h / 25 °C | ||
Multi-step reaction with 4 steps 1: 98 percent / Et3N / H2O / 3 h / 25 °C 2: 100 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 3: 96 percent / TFA / CH2Cl2 / 4 h / 25 °C 4: 97 percent / EEDQ / CH2Cl2 / 3 h / 25 °C | ||
Multi-step reaction with 2 steps 1: 98 percent / Et3N / H2O / 3 h / 25 °C 2: 97 percent / EEDQ / CH2Cl2 / 3 h / 25 °C |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 9 steps 1: 98 percent / Et3N / H2O / 3 h / 25 °C 2: 96 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 3: 94 percent / TFA / CH2Cl2 / 4 h / 25 °C 4: 100 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 5: 96 percent / TFA / CH2Cl2 / 4 h / 25 °C 6: 97 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 7: 96 percent / TFA / CH2Cl2 / 4 h / 25 °C 8: 92 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 9: 91 percent / TFA / CH2Cl2 / 4 h / 25 °C | ||
Multi-step reaction with 7 steps 1: 98 percent / Et3N / H2O / 3 h / 25 °C 2: 100 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 3: 96 percent / TFA / CH2Cl2 / 4 h / 25 °C 4: 97 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 5: 96 percent / TFA / CH2Cl2 / 4 h / 25 °C 6: 92 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 7: 91 percent / TFA / CH2Cl2 / 4 h / 25 °C | ||
Multi-step reaction with 5 steps 1: 98 percent / Et3N / H2O / 3 h / 25 °C 2: 97 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 3: 96 percent / TFA / CH2Cl2 / 4 h / 25 °C 4: 92 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 5: 91 percent / TFA / CH2Cl2 / 4 h / 25 °C |
Multi-step reaction with 3 steps 1: 98 percent / Et3N / H2O / 3 h / 25 °C 2: 92 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 3: 91 percent / TFA / CH2Cl2 / 4 h / 25 °C |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 9 steps 1: 98 percent / Et3N / H2O / 3 h / 25 °C 2: 96 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 3: 94 percent / TFA / CH2Cl2 / 4 h / 25 °C 4: 100 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 5: 96 percent / TFA / CH2Cl2 / 4 h / 25 °C 6: 97 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 7: 96 percent / TFA / CH2Cl2 / 4 h / 25 °C 8: 83 percent / Et3N / CH2Cl2; dioxane / 3 h / 25 °C 9: 70 percent / nBu4NOH / methanol / 1 h / 17 °C / UV-irradiation | ||
Multi-step reaction with 7 steps 1: 98 percent / Et3N / H2O / 3 h / 25 °C 2: 100 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 3: 96 percent / TFA / CH2Cl2 / 4 h / 25 °C 4: 97 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 5: 96 percent / TFA / CH2Cl2 / 4 h / 25 °C 6: 83 percent / Et3N / CH2Cl2; dioxane / 3 h / 25 °C 7: 70 percent / nBu4NOH / methanol / 1 h / 17 °C / UV-irradiation | ||
Multi-step reaction with 5 steps 1: 98 percent / Et3N / H2O / 3 h / 25 °C 2: 97 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 3: 96 percent / TFA / CH2Cl2 / 4 h / 25 °C 4: 83 percent / Et3N / CH2Cl2; dioxane / 3 h / 25 °C 5: 70 percent / nBu4NOH / methanol / 1 h / 17 °C / UV-irradiation |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 8 steps 1: 98 percent / Et3N / H2O / 3 h / 25 °C 2: 96 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 3: 94 percent / TFA / CH2Cl2 / 4 h / 25 °C 4: 100 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 5: 96 percent / TFA / CH2Cl2 / 4 h / 25 °C 6: 97 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 7: 96 percent / TFA / CH2Cl2 / 4 h / 25 °C 8: 83 percent / Et3N / CH2Cl2; dioxane / 3 h / 25 °C | ||
Multi-step reaction with 6 steps 1: 98 percent / Et3N / H2O / 3 h / 25 °C 2: 100 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 3: 96 percent / TFA / CH2Cl2 / 4 h / 25 °C 4: 97 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 5: 96 percent / TFA / CH2Cl2 / 4 h / 25 °C 6: 83 percent / Et3N / CH2Cl2; dioxane / 3 h / 25 °C | ||
Multi-step reaction with 4 steps 1: 98 percent / Et3N / H2O / 3 h / 25 °C 2: 97 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 3: 96 percent / TFA / CH2Cl2 / 4 h / 25 °C 4: 83 percent / Et3N / CH2Cl2; dioxane / 3 h / 25 °C |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 8 steps 1: 98 percent / Et3N / H2O / 3 h / 25 °C 2: 96 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 3: 94 percent / TFA / CH2Cl2 / 4 h / 25 °C 4: 100 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 5: 96 percent / TFA / CH2Cl2 / 4 h / 25 °C 6: 97 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 7: 96 percent / TFA / CH2Cl2 / 4 h / 25 °C 8: 92 percent / EEDQ / CH2Cl2 / 3 h / 25 °C | ||
Multi-step reaction with 6 steps 1: 98 percent / Et3N / H2O / 3 h / 25 °C 2: 100 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 3: 96 percent / TFA / CH2Cl2 / 4 h / 25 °C 4: 97 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 5: 96 percent / TFA / CH2Cl2 / 4 h / 25 °C 6: 92 percent / EEDQ / CH2Cl2 / 3 h / 25 °C | ||
Multi-step reaction with 4 steps 1: 98 percent / Et3N / H2O / 3 h / 25 °C 2: 97 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 3: 96 percent / TFA / CH2Cl2 / 4 h / 25 °C 4: 92 percent / EEDQ / CH2Cl2 / 3 h / 25 °C |
Multi-step reaction with 2 steps 1: 98 percent / Et3N / H2O / 3 h / 25 °C 2: 92 percent / EEDQ / CH2Cl2 / 3 h / 25 °C |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 11 steps 1: 98 percent / Et3N / H2O / 3 h / 25 °C 2: 96 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 3: 94 percent / TFA / CH2Cl2 / 4 h / 25 °C 4: 100 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 5: 96 percent / TFA / CH2Cl2 / 4 h / 25 °C 6: 97 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 7: 96 percent / TFA / CH2Cl2 / 4 h / 25 °C 8: 92 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 9: 91 percent / TFA / CH2Cl2 / 4 h / 25 °C 10: 81 percent / Et3N / CH2Cl2; dioxane / 3 h / 25 °C 11: 61 percent / nBu4NOH / methanol / 1 h / 17 °C / UV-irradiation | ||
Multi-step reaction with 9 steps 1: 98 percent / Et3N / H2O / 3 h / 25 °C 2: 100 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 3: 96 percent / TFA / CH2Cl2 / 4 h / 25 °C 4: 97 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 5: 96 percent / TFA / CH2Cl2 / 4 h / 25 °C 6: 92 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 7: 91 percent / TFA / CH2Cl2 / 4 h / 25 °C 8: 81 percent / Et3N / CH2Cl2; dioxane / 3 h / 25 °C 9: 61 percent / nBu4NOH / methanol / 1 h / 17 °C / UV-irradiation | ||
Multi-step reaction with 7 steps 1: 98 percent / Et3N / H2O / 3 h / 25 °C 2: 97 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 3: 96 percent / TFA / CH2Cl2 / 4 h / 25 °C 4: 92 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 5: 91 percent / TFA / CH2Cl2 / 4 h / 25 °C 6: 81 percent / Et3N / CH2Cl2; dioxane / 3 h / 25 °C 7: 61 percent / nBu4NOH / methanol / 1 h / 17 °C / UV-irradiation |
Multi-step reaction with 5 steps 1: 98 percent / Et3N / H2O / 3 h / 25 °C 2: 92 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 3: 91 percent / TFA / CH2Cl2 / 4 h / 25 °C 4: 81 percent / Et3N / CH2Cl2; dioxane / 3 h / 25 °C 5: 61 percent / nBu4NOH / methanol / 1 h / 17 °C / UV-irradiation |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 10 steps 1: 98 percent / Et3N / H2O / 3 h / 25 °C 2: 96 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 3: 94 percent / TFA / CH2Cl2 / 4 h / 25 °C 4: 100 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 5: 96 percent / TFA / CH2Cl2 / 4 h / 25 °C 6: 97 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 7: 96 percent / TFA / CH2Cl2 / 4 h / 25 °C 8: 92 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 9: 91 percent / TFA / CH2Cl2 / 4 h / 25 °C 10: 81 percent / Et3N / CH2Cl2; dioxane / 3 h / 25 °C | ||
Multi-step reaction with 8 steps 1: 98 percent / Et3N / H2O / 3 h / 25 °C 2: 100 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 3: 96 percent / TFA / CH2Cl2 / 4 h / 25 °C 4: 97 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 5: 96 percent / TFA / CH2Cl2 / 4 h / 25 °C 6: 92 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 7: 91 percent / TFA / CH2Cl2 / 4 h / 25 °C 8: 81 percent / Et3N / CH2Cl2; dioxane / 3 h / 25 °C | ||
Multi-step reaction with 6 steps 1: 98 percent / Et3N / H2O / 3 h / 25 °C 2: 97 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 3: 96 percent / TFA / CH2Cl2 / 4 h / 25 °C 4: 92 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 5: 91 percent / TFA / CH2Cl2 / 4 h / 25 °C 6: 81 percent / Et3N / CH2Cl2; dioxane / 3 h / 25 °C |
Multi-step reaction with 4 steps 1: 98 percent / Et3N / H2O / 3 h / 25 °C 2: 92 percent / EEDQ / CH2Cl2 / 3 h / 25 °C 3: 91 percent / TFA / CH2Cl2 / 4 h / 25 °C 4: 81 percent / Et3N / CH2Cl2; dioxane / 3 h / 25 °C |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
66% | In toluene at 110℃; for 48h; | 43.C 1-Benzyl-6a-methyl-hexahydro-pyrrolo[3,4-b]pyrrole-5-carboxylic Acid Benzyl Ester EXAMPLE 43C 1-Benzyl-6a-methyl-hexahydro-pyrrolo[3,4-b]pyrrole-5-carboxylic Acid Benzyl Ester The product of Example 43B (3.0 g, 12.1 mmol) was treated with benzylaminoacetic acid (Aldrich, 2.0 g, 12.1 mmol) in toluene (50 mL) at 110° C. over 2 days. The toluene was removed under reduced pressure and the residue was purified by column chromatography (SiO2, 40% hexanes-ethyl acetate) to give the title compound (2.8 g, 8.0 mmol, 66% yield). 1H NMR (MeOH-d4, 300 MHz) δ 1.23 (s, 3H), 1.49-1.64 (m, 1H), 1.93-2.10 (m, 1H), 2.36-2.51 (m, 1H), 2.56-2.67 (m, 1H), 2.73-2.87 (m, 1H), 3.10 (d, J=11.5 Hz, 1H), 3.32-3.41 (m, 1H), 3.52 (d, J=13.2 Hz, 1H), 3.58-3.78 (m, 3H), 5.03-5.22 (m, 2H), 7.14-7.42 (m, 10H); MS (DCI/NH3) m/z 351 (M+H)+. |
66% | In toluene at 110℃; for 48h; | 20.C 1-Benzyl-6a-methyl-hexa hydro-pyrrolo[3,4-b]pyrrole-5-carboxylic Acid Benzyl Ester Example 20C 1-Benzyl-6a-methyl-hexa hydro-pyrrolo[3,4-b]pyrrole-5-carboxylic Acid Benzyl Ester The product of Example 20B (3.0 g, 12.1 mmol) was treated with benzylaminoacetic acid (Aldrich, 2.0 g, 12.1 mmol) in toluene (50 mL) at 110° C. over 2 days. The toluene was removed under reduced pressure and the residue was purified by column chromatography (SiO2, 40% hexanes-ethyl acetate) to give the title compound (2.8 g, 8.0 mmol, 66% yield). 1H NMR (MeOH-d4, 300 MHz) δ 1.23 (s, 3H), 1.49-1.64 (m, 1H), 1.93-2.10 (m, 1H), 2.36-2.51 (m, 1H), 2.56-2.67 (m, 1H), 2.73-2.87 (m, 1H), 3.10 (d, J=11.5 Hz, 1H), 3.32-3.41 (m, 1H), 3.52 (d, J=13.2 Hz, 1H), 3.58-3.78 (m, 3H), 5.03-5.22 (m, 2H), 7.14-7.42 (m, 10H); MS (DCl/NH3) m/z 351 (M+H)+. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
28% | In water; toluene for 14h; Heating / reflux; Dean Stark trap; | 41.1 Formaldehyde (37 wt. % in water) was added dropwise over 3 h to a refluxing suspension of N-benzylglycine (10 g, 60.37 mmol) and dimethylacetylenedicarboxylate (3.7 mL, 30.19 mmol) in 200 mL of toluene. The resulting mixture stirred and heated to reflux for 14 h while water was continuously removed using a Dean Stark trap. The reraction misxture was cooled to RT and evaporated. The residue was purified by Si02 chromatography eluting with a hexane/EtOAc gradient (100 % EtOAc to 75/25) over 40 minutes with and 80 mL/min flow rate to afford 3.4 g (28%) of 122a: 'H NMR (CDC13) 8 2.71 (d, 2H, J= 9 Hz), 3.08 (d, 2H, J= 9 Hz ), 3.66 (s, 5H), 7.17-7.42 (m, 5H) ; MS (ES+) m/z 409 (M + H)+. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
In 1-methyl-pyrrolidin-2-one; toluene at 140℃; for 72h; | 1 A mixture of (E)-4-((l-(3,5-dichlorophenyl)-3-methyl-2, 5- dioxoimidazolidin-4-ylidene)methyl)benzonitrile (1.05g, 2.82 mmol), hexamethylenetetramine (0.395 g, 2.82 mmol), N-benzylglycine (1.17 g, 7.05 mmol), toluene (5 ml), and l-methyl-2-pyrrolidinone (NMP, 10 ml) was heated to 140°C. The extent of reaction was monitored by HPLC. After 72 hours, the reaction had stopped short of completion. The ratio of product to starting material ((E)-4-((l-(3,5- dichlorophenyl)-3 -methyl-2, 5 -dioxoimidazolidin-4-ylidene)methyl)benzonitrile) was 1.36: 1. Mass spectra of the mixture indicated the presence of the desired product. The mixture was washed with water and extracted into toluene. The impure product was obtained as an oil. Comparison of the product obtained to authentic material was made by HPLC. The ratio of the desired (5S, 9R) isomer to the undesired was 19:1. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
34% | With N-ethyl-N,N-diisopropylamine; paraformaldehyde In ethyl acetate; toluene | 22.a tert-Butyl (3R,4S)-3-[(hydroxyamino)carbonyl]-4-[({4-[(2-methyl-4-quinolinyl)methoxy]phenyl}sulfonyl)methyl]-1-pyrrolidinecarboxylate trifluoroacetate (22a) A solution of N-benzylglycine (12.39 g, 75 mmol), dimethyl maleate (6.26 g, 50 mmol), paraformaldehyde (4.5 g, 150 mmol) and DIEA (8.7 mL, 50 mmol) in toluene (100 mL) was stirred at reflux for 2 hours and concentrated. The residue was taken up in EtOAc. The solution was washed with brine 3*, dried (MgSO4) and concentrated. Column chromatography eluding with 50% EtOAc/hexanes provided dimethyl cis-1-benzyl-3,4-pyrrolidinedicarboxylate (4.8 g, 34%). MS (M+H)+=278.5. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With triethylamine In chloroform; water; ethyl acetate | 24 1-Benzyl-3-(4-butylphenyl)-2-thioxo-imidazolidin-4-one EXAMPLE 24 1-Benzyl-3-(4-butylphenyl)-2-thioxo-imidazolidin-4-one A mixture of N-benzyl glycine (8.7 g), 4-n-butylphenyl-isothiocyanate (8.55 g), triethyl amine (5.5 g) and chloroform (150 mL) was heated at reflux for 5 hours. The solvent was evaporated. The residue was dissolved in ethyl acetate (400 mL) and water (2*300 mL). The organic phase was dried over anhydrous magnesium sulfate and evaporated to dryness. Crystallization from ethyl acetate afforded the title compound (11.4 g) as an off-white solid, m.p. 149°-151° C. Anal. Calcd. for. C20 H22 N2 OS: C, 70.97; H, 6.55; N, 8.28. Found: C, 70.81; H, 6.76; N, 8.32. Mass spectrum (EI, M.+) m/z 338. | |
With triethylamine In chloroform; water; ethyl acetate | 53 1-Benzyl-3-(4-butylphenyl)-2-thioxo-imidazolidin-4-one EXAMPLE 53 1-Benzyl-3-(4-butylphenyl)-2-thioxo-imidazolidin-4-one A mixture of N-benzyl glycine (8.7 g), 4-n-butylphenyl-isothiocyanate (8.55 g), triethyl amine (5.5 g) and chloroform (150 mL) was heated at reflux for 5 hours. The solvent was evaporated. The residue was dissolved in ethyl acetate (300 mL) and water (2*200 mL). The organic phase was dried over anhydrous magnesium sulfate and evaporated to dryness. Crystallization from ethyl acetate afforded the title compound (11.4 g) as an off-white solid, m.p. 149°-151° C. Anal. Calcd. for. C20 H22 N2 O S: C, 70.97; H, 6.55; N, 8.28. Found: C, 70.81; H, 6.76; N, 8.32. Mass spectrum (EI, M.+) m/z 338. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
In toluene; | e) Ethyl 2-benzyl-2,7-diazabicyclo[3.3.0]octane-7-carboxylate STR17 42.8 g (0.25 mol) of ethyl N-allyl-N-(2-oxoethyl) -carbamate are heated under reflux overnight with 41.3 g (0.25 mol) of N-benzylglycine in 750 ml of toluene. The mixture is concentrated and the residue is distilled. Yield: 59.6 g (87% of theory). Boiling point: 140 C./0.09 mbar. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
58.9% | Stage #1: N-benzylglycine With triethylamine In chloroform; N,N-dimethyl-formamide at 0 - 20℃; for 0.416667h; Stage #2: (S)-2-amino-butanamide With benzotriazol-1-ol; dicyclohexyl-carbodiimide In chloroform-d1; N,N-dimethyl-formamide at 20 - 45℃; | 1.1 In a three necked flask fitted with a magnetic stirrer and a reflux condenser, under inert atmosphere, triethylamine (69 ml_, 496 mmol) is added dropwise to a solution of (benzylamino)acetic acid a1 (50 g, 248 mmol) in a mixture of DMF (400 ml.) and CHCI3 (400 ml.) at 0 0C. The mixture is stirred at 0 0C for 10 minutes and at room temperature for 15 minutes. 1 H-1 ,2,3-benzotriazol-1-ol (36.9 g, 273 mmol), (2S)-2-aminobutanamide a2 (30.4 g, 298 mmol) and N,N'-dicyclohexylcarbodiimide (56.33 g, 273 mmol) are respectively added to the mixture, each one of them in solution of 250 ml. (or 300 ml.) of CHCI3/DMF (50/50 v/v). DMF (200 mL) is added and the mixture is heated at 45 0C for 4 h, and stirred at room temperature for 3 days. The mixture is partially concentrated (2/3 of solvent is removed) and again heated at 45 0C overnight. The whole solvent is removed under reduced pressure, the residue is dissolved in CH2CI2 and filtered. The organic phase is concentrated, the obtained residue is purified by chromatography on silicagel (CH2CI2ZC2H5OHZNH4OH 94/6/0.6 v/v/v) and recrystallized from AcOEt to afford (2S)-2- [(benzylamino)acetyl]amino}butanamide a3 (36.8 g). Yield: 58.9 %.1 H NMR δH (250 MHz, DMSO, ppm): 0.85 (t, 3 H), 1.5-1.8 (m, 2 H), 2.7 (s, 1 H), 3.15 (s, 2H), 3.7 (s, 2 H), 4.25 (m, 1 H), 7.0 (s, 1 H), 7.2-7.5 (m, 6 H), 7.9 (d, 1 H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
33% | Stage #1: formaldehyd; N-benzylglycine With formic acid at 70℃; for 5h; Stage #2: trifluoroacetic acid In methanol; water | To a stirred solution of 2-(benzylamino)acetic acid (2.0 g, 12.1 mmol) in formic acid (91 mL) was added formaldehyde (6.94 mL, 93.2 mmol). After five hours at 70° C., the reaction mixture was concentrated under reduced pressure to 20 mL and a white solid precipitated. Following filtration, the mother liquors were collected and further concentrated under reduced pressure providing the crude product. Purification by reverse-phase preparative HPLC (Xterra 30×100 mm, detection at 220 nm, flow rate 35 mL/min, 0 to 35% B over 8 min; A=90% water, 10% methanol, 0.1% TFA, B=10% water, 90% methanol, 0.1% TFA) provided the title compound 2-(benzyl(methyl)-amino)acetic acid as its TFA salt (723 mg, 33%) as a colorless wax. 1H NMR (300 MHz, DMSO-d6) δ ppm 2.75 (s, 3H) 4.04 (s, 2H) 4.34 (s, 2H) 7.29-7.68 (m, 5H). LCMS: Anal. Calcd. for: C10H13NO2 179.09; Found: 180.20 (M+H)+. |
33% | Stage #1: formaldehyd; N-benzylglycine In formic acid at 70℃; for 5h; Stage #2: trifluoroacetic acid In methanol; water HPLC; | 49 To a stirred solution of 2- (benzylamino) acetic acid (2.O g, 12.1 mmol) in formic acid (91 mL) was added formaldehyde (6.94 mL, 93.2 mmol) . After five hours at 70 0C, the reaction mixture was concentrated under reduced pressure to 20 mL and a white solid precipitated. Following filtration, the mother liquors were collected and further concentrated under reduced pressure providing the crude product. Purification by reverse-phase preparative HPLC (Xterra 30 X 100 mm, detection at 220 nm, flow rate 35 mL/min, 0 to 35% B over 8 min; A= 90% water, 10 % methanol, 0.1% TFA, B=10% water, 90 % methanol, 0.1% TFA) provided the title compound 2-(benzyl (methyl) -amino) acetic acid as its TFA salt (723118 mg, 33%) as a colorless wax. 1H NMR (300 MHz, DMSO-d6) δ ppm 2.75 (s, 3H) 4.04 {s, 2H) 4.34 (s, 2H) 7.29-7.68 (m,5H) . LCMS: Anal. Calcd. for: Ci0Hi3NO2 175.05; Found: 180.20 (M+H)+. |
33% | Stage #1: formaldehyd; N-benzylglycine In formic acid at 70℃; for 5h; Stage #2: trifluoroacetic acid In methanol; water | To a stirred solution of 2-(benzylamino)acetic acid (2.0 g, 12.1 mmol) in formic acid (91 mL) was added formaldehyde (6.94 mL, 93.2 mmol). After five hours at 70 0C5 the reaction mixture was concentrated under reduced pressure to 20 mL and a white solid precipitated. Following filtration, the mother liquors were collected and further concentrated under reduced pressure providing the crude product. Purification by reverse-phase preparative HPLC (XTERRA 30 X 100 mm, detection at 220 nm, flow rate 35 mL/rnin, 0 to 35% B over 8 min; A- 90% water, 10 % methanol, 0.1% TFA, B=I 0% water, 90 % methanol, 0.1% TFA) provided the title compound 2-(benzyl(methyl)-amino)acetic acid as its TFA salt (723 mg, 33%) as a colorless wax. 1H NMR (300 MHz, DMSOd6) δ ppm 2.75 (s, 3H) 4.04 (s, 2H) 4.34 (s, 2H) 7.29- 7.68 (m, 5H). LCMS: Anal. Calcd. for: C10H13NO2 175.05; Found: 180.20 (M+H)+ |
33% | Stage #1: formaldehyd; N-benzylglycine With formic acid at 70℃; for 5h; Stage #2: trifluoroacetic acid In methanol; water | Cap-49 To a stirred solution of 2-(benzylamino)acetic acid (2.0 g, 12.1 mmol) in formic acid (91 mL) was added formaldehyde (6.94 mL, 93.2 mmol). After five hours at 70 °C, the reaction mixture was concentrated under reduced pressure to 20 mL and a white solid precipitated. Following filtration, the mother liquors were collected and further concentrated under reduced pressure providing the crude product. Purification by reverse-phase preparative HPLC (XTERRA 30 X 100 mm, detection at 220 nm, flow rate 35 mL/min, 0 to 35% B over 8 min; A= 90% water, 10 % methanol, 0.1% TFA, B=10% water, 90 % methanol, 0.1% TFA) provided the title compound 2-(benzyl(methyl)-amino)acetic acid as its TFA salt (723 mg, 33%) as a colorless wax. XH NMR (300 MHz, DMSO-d6) δ ppm 2.75 (s, 3H) 4.04 (s, 2H) 4.34 (s, 2H) 7.29-7.68 (m, 5H). LCMS: Anal. Calcd. for: Ci0H13NO2 179.09; Found: 180.20 (M+H)+. |
33% | Stage #1: formaldehyd; N-benzylglycine With formic acid at 70℃; for 5h; Stage #2: trifluoroacetic acid In methanol; water RP-HPLC; | 49 To a stirred solution of 2-(benzylamino)acetic acid (2.0 g, 12.1 mmol) in formic acid (91 mL) was added formaldehyde (6.94 mL, 93.2 mmol). After five hours at 70 °C, the reaction mixture was concentrated under reduced pressure to 20 mL and a white solid precipitated. Following filtration, the mother liquors were collected and further concentrated under reduced pressure providing the crude product. Purification by reverse-phase preparative HPLC (XTERRA 30 X 100 mm, detection at 220 nm, flow rate 35 mL/min, 0 to 35% B over 8 min; A= 90% water, 10 % methanol, 0.1% TFA, B= 10% water, 90 % methanol, 0.1% TFA) provided the title compound 2-(benzyl(methyl)-amino)acetic acid as its TFA salt (723 mg, 33%) as a colorless wax. 1H NMR (300 MHz, DMSO-d6) δ ppm 2.75 (s, 3H) 4.04 (s, 2H) 4.34 (s, 2H) 7.29-7.68 (m, 5H). LCMS: Anal. Calcd. for: C10H13NO2 179.09; Found: 180.20 (M+H)+. |
33% | Stage #1: formaldehyd; N-benzylglycine With formic acid at 70℃; for 5h; Stage #2: trifluoroacetic acid | To a stirred solution of 2-(benzylamino)acetic acid (2.0 g, 12.1 mmol) in formic acid (91 mL) was added formaldehyde (6.94 mL, 93.2 mmol). After five hours at 70 °C, the reaction mixture was concentrated under reduced pressure to 20 mL and a white solid precipitated. Following filtration, the mother liquors were collected and further concentrated under reduced pressure providing the crude product. Purification by reverse-phase preparative HPLC (Xterra 30 X 100 mm, detection at 220 nm, flow rate 35 mL/min, 0 to 35% B over 8 min; A= 90% water, 10 % methanol, 0.1% TFA, B=10% water, 90 % methanol, 0.1% TFA) provided the title compound 2-(benzyl(methyl)-amino)acetic acid as its TFA salt (723 mg, 33%) as a colorless wax. XH NMR (300 MHz, DMSO-d6) δ ppm 2.75 (s, 3H) 4.04 (s, 2H) 4.34 (s, 2H) 7.29-7.68 (m, 5H). LCMS: Anal. Calcd. for: Ci0H13NO2 179.09; Found: 180.20 (M+H)+. |
33% | Stage #1: formaldehyd; N-benzylglycine With formic acid at 70℃; for 5h; Stage #2: trifluoroacetic acid In methanol; water reverse-phase preparative HPLC; | To a stirred solution of 2-(benzylamino)acetic acid (2.0 g, 12.1 mmol) in formic acid (91 mL) was added formaldehyde (6.94 mL, 93.2 mmol). After five hours at 70 0C, the reaction mixture was concentrated under reduced pressure to 20 mL and a white solid precipitated. Following filtration, the mother liquors were collected and further concentrated under reduced pressure providing the crude product. Purification by reverse-phase preparative HPLC (Xterra 30 X 100 mm, detection at 220 nm, flow rate 35 mL/min, 0 to 35% B over 8 min; A= 90% water, 10 % methanol, 0.1% TFA, B=10% water, 90 % methanol, 0.1% TFA) provided the title compound 2-(benzyl(methyl)-amino)acetic acid as its TFA salt (723 mg, 33%) as a colorless wax. 1H NMR (300 MHz, DMSO-d6) δ ppm 2.75 (s, 3H) 4.04 (s, 2H) 4.34 (s, 2H) 7.29-7.68 (m, 5H). LCMS: Anal. Calcd. for: Ci0Hi3NO2 175.05; Found: 180.20 (M+H)+. |
33% | Stage #1: formaldehyd; N-benzylglycine With formic acid at 70℃; for 5h; Stage #2: trifluoroacetic acid In methanol; water | Cap-49To a stirred solution of 2-(benzylamino)acetic acid (2.0 g, 12.1 mmol) in formic acid (91 mL) was added formaldehyde (6.94 mL, 93.2 mmol). After five hours at 70 0C, the reaction mixture was concentrated under reduced pressure to 20 mL and a white solid precipitated. Following filtration, the mother liquors were collected and further concentrated under reduced pressure providing the crude product. Purification by reverse-phase preparative HPLC (Xterra 30 X 100 mm, detection at 220 nm, flow rate 35 mL/min, 0 to 35% B over 8 min; A = 90% water, 10 % methanol, 0.1% TFA, B = 10% water, 90 % methanol, 0.1% TFA) provided the title compound 2-(benzyl(methyl)-amino)acetic acid as its TFA salt (723 mg, 33%) as a colorless wax. 1H NMR (300 MHz, DMSO-d6) δ ppm 2.75 (s, 3H) 4.04 (s, 2H) 4.34 (s, 2H) 7.29 - 7.68 (m, 5H). LCMS: Anal. Calcd. for: Ci0H13NO2 179.22; Found: 180.20 (M+H)+. |
33% | Stage #1: formaldehyd; N-benzylglycine With formic acid at 70℃; for 5h; Stage #2: trifluoroacetic acid In methanol; water | 49 To a stirred solution of 2-(benzylamino)acetie acid (2.0 g, 12.1 mmol) in formic acid (91 mL) was added formaldehyde (6.94 mL, 93.2 mmol). After five hours at 70° C., the reaction mixture was concentrated under reduced pressure to 20 mL and a white solid precipitated. Following filtration, the mother liquors were collected and further concentrated under reduced pressure providing the crude product. Purification by reverse-phase preparative HPLC (Xterra 30×100 mm, detection at 220 nm, flow rate 35 mL/min, 0 to 35% B over 8 min; A=90% water, 10% methanol, 0.1% TFA, B=10% water, 90% methanol, 0.1% TFA) provided the title compound 2-(benzyl(methyl)-amino)acetic acid as its TFA salt (723 mg, 33%) as a colorless wax. 1H NMR (300 MHz, DMSO-d6) δ ppm 2.75 (s, 3H) 4.04 (s, 2H) 4.34 (s, 2H) 7.29-7.68 (m, 5H). LCMS: Anal. Calcd. for: C10H13NO2 179.09; Found: 180.20 (M+H)+. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
74% | In toluene at 105℃; for 17h; Heating / reflux; | 5.16.16 To a mixture of diethyl fumarate (8 68g, 50 4mmol, Sigma-Aldϖch) and toluene (80OmL) at 1050C was added dropwise over Ih a mixture of formaldehyde, in the form of paraformaldehyde, (10 2g, 339mmol (based on formaldehyde monomer molecular weight), Sigma-Aldϖch) and 2-(benzylamino)acetic acid (12 2g, 60 5mmol, Sigma-Aldϖch) The resulting reaction mixture was refluxed for 16h in an apparatus comprising a Dean-Stark trap After concentration under reduced pressure, the residue was dissolved in hexanes, filtered, and concentrated under reduced pressure to provide a brown oil. Flash chromatography of the oil with a silica gel column eluting with 1 :5 EtOAc:hexanes provided 13 8g of the compound of formula FU as a colorless oil (yield 74%). The identity of the compound of formula FU, (3S,4S)-di ethyl l-benzylpyrrohdine-3,4- dicarboxylate, was confirmed using TLC and LC/MS.Compound FU: TLC (SiO2) 1 :1 EtOAc:hexanes: Rf=O 8 with UV detection, Dragendorff s reagent; LC/MS: /n/z=306 [M+H]+ (CaIc: 305). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
77% | Method 14; Methyl glycyl-D-valinate hydrochloride; N-Benzylglycin (500 mg, 3.03 mmol) was dissolved in 20 ml DCM. DIPEA (1.55 ml, 9.08 mmol) and TBTU (1.17 g, 3.63 mmol) were added and the suspension was stirred for 10 min. <strong>[7146-15-8]D-Valine methyl ester hydrochloride</strong> (510 mg, 3.03 mmol) was added during 5 min and the mixture was stirred over night. Water (ca 10 ml) was added and the aqueous phase was acidified to pH 4 using 0.3 M KHS04. The yellow organic phase was washed with 10 ml acidified water (KHS04) followed by water, dried and concentrated. The crude mixture was purified by chromatography on 50 g Si02 using a gradient from 20-80% EtOAc in hexane as eluent. The intermediate (650 mg, 77%), was dissolved in MeOH and 25 mg Pd/C (10 mol%) was added. The solution was hydrogenated at 1 atm over night. The solution was filtered over celite and concentrated. MeCN, 10 ml, was added and the mixture was heated to ca 60C. Pyridine hydrochloride (220 mg, 1.86 mmol) was added and the solution was slowly allowed to cool down. The solvent was removed under reduced pressure and the residue was recrystallized from 5 ml MeCN. The white solid was filtered off to yield the title compound in 360 mg (69%). lH-NMR (CD30D, 400 MHz) : 8 0.92 (dd, 6H), 2.07-2. 19 (m, 1H), 3.68 (s, 3H), 3.71 (s, 2H), 4. 37 (d, 1H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Stage #1: (3R,4R)-1-(4-fluorophenyl)-3-[(4-fluorobenzoyl)methylthio]-4-{4-[N-(carboxymethyl)carbamoylmethoxy]phenyl}azetidin-2-one With 4-methyl-morpholine; (1,1,1-Benzotriazol-1-yl)-1,1,3,3-tetramethyluronium tetrafluoroborate In DMF (N,N-dimethyl-formamide) at 30℃; for 0.5h; Stage #2: N-benzylglycine In DMF (N,N-dimethyl-formamide) at 30℃; for 1h; | 48 Example 48; N-[4-((2R, 3R)-1-(4-Fluorophenyl)-3-[2-(4-lluorophenyl)-2-hydroxyethyl] thio}-4- oxoazetidin-2-yl) phenoxy] acetyl} glycyl-N-benzylglycine; TBTU (0. 011 g, 0.034 mmol) was added to a solution of N-{ [4-((2R, 3R)-1-(4-fluorophenyl)- 3- { [2- (4-fluorophenyl)-2-oxoethyl] thio}-4-oxoazetidin-2-yl) phenoxy] acetyl} glycine (0.015 g, 0.028 mmol) and NMM (0.020 ml, 0.182 mmol) in DMF (2 ml) at 30°C. After 30 min, N- benzylglycine (0.005 g, 0.030 mmol, 98 %) was added and the mixture was stirred at 30°C for 1h. The reaction was quenched with water (0.2 ml) and the mixture was diluted with MeOH (2 ml). NaBH4 (0.015 g, 0.397 mmol) was added and the mixture was stirred for 10 min. Ammonium acetate buffer (0. 1M, 3 ml) was added and most of the methanol was removed under reduced pressure. The remaining solution was purified by preparative HPLC, using a gradient of 20-50% MeCN in 0. 1M ammonium acetate buffer as eluent. After freeze-drying, the title compound (0.010 g, 53 % yield) was obtained as a white solid. M/z : 690.0. 1H NMR (DMSO, 400 MHz) : 8 2.83-2. 94 (m, 2H), 3.91 (s, 1H), 3.98-4. 09 (m, 3H), 4.25-4. 29 (m, 1H), 4.50 (s, 2H), 4.54 (s, 1H), 4.62 (s, 1H), 4.68-4. 76 (m, 1H), 5.02-5. 07 (m, 1H), 6.92-7. 02 (m, 2H), 7.05-7. 40 (m, 15H), 8.14-8. 21 (m, 1H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
33% | With formic acid at 70℃; for 5h; | To a stirred solution of 2-(benzylamino)acetic acid (2.0 g, 12.1 mmol) in formic acid (91 mL) was added formaldehyde (6.94 mL, 93.2 mmol). After five hours at 70 0C, the reaction mixture was concentrated under reduced pressure to 20 mL and a white solid precipitated. Following filtration, the mother liquors were collected and further concentrated under reduced pressure providing the crude product. Purification by reverse-phase preparative HPLC (Xterra 30 X 100 mm, detection at 220 nm, flow rate 35 mL/min, 0 to 35% B over 8 min; A= 90% water, 10 % methanol, 0.1% TFA, B=10% water, 90 % methanol, 0.1% TFA) provided the title compound 2-(benzyl(methyl)-amino)acetic acid as its TFA salt (723 mg, 33%) as a colorless wax. 1H NMR (300 MHz, DMSO-de) δ ppm 2.75 (s, 3H) 4.04 (s, 2H) 4.34 (s, 2H) 7.29-7.68 (m, 5H). LCMS: Anal. Calcd. for: Ci0Hi3NO2 179.09; Found: 180.20 (M+H)* |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
78% | Stage #1: N-benzylglycine With copper(l) iodide In toluene for 0.166667h; Inert atmosphere; Stage #2: benzaldehyde; phenylacetylene In toluene at 130℃; Inert atmosphere; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
85% | Stage #1: N-benzylglycine With copper(l) iodide In toluene for 0.166667h; Inert atmosphere; Stage #2: 4-methoxy-benzaldehyde; phenylacetylene In toluene at 130℃; Inert atmosphere; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Stage #1: N-[4-((2R,3R)-1-(4-fluorophenyl)-3-[2-(4-fluorophenyl)-2-oxoethyl]thio}-4-oxoazetidin-2-yl)phenoxy]acetyl}glycylglycine With 4-methyl-morpholine; O-(benzotriazol-1-yl)-N,N,N',N'-tetramethyluronium tetrafluoroborate In N,N-dimethyl-formamide at 30℃; for 0.5h; Stage #2: N-benzylglycine In N,N-dimethyl-formamide at 30℃; for 2.5h; | 2 Example 2 iV-[4-((2R,3i?)-l-(4-fluorophenyl)-3-[2-(4-fluorophenyl)-2-hydroxyethyl]thio}-4- oxoazetidin-2-yl)phenoxy]acetyl}glycylglycyl-yV-benzylgIycine EPO To a solution of iV-[4-((2i?,3i?)-l-(4-fluoroρhenyl)-3-[2-(4-fluorophenyl)-2-oxoethyl]thio}- 4-oxoazetidin-2-yl)phenoxy]acetyl}glycylglycine (0.020 g, 0.033 ininol) and NMM (0.015 ml, 0.136 mmol) in DMF (2 ml) at 3O0C was added TBTU (0.015 g, 0.047 mmol). After 30min was N-benzylglycine (0.006 g, 0.036 mmol, 98 %) added and the mixture was stirred at 3O0C for 2h30min. The reaction was quenched by the addition of water (1 ml) and the resulting mixture was diluted with MeOH (2 ml). To this solution was added NaBH4 (0.020 g, 0.529 mmol) and the mixture was stirred for 10 min. The reaction was quenched by the addition of a 0. IM ammonium acetate buffer (3 ml) before most of the methanol was removed under reduced pressure. The remaining solution was purified by preparative HPLC, using a gradient of 20-50% MeCN in 0.1M ammonium acetate buffer as eluent. Freeze-drying of the pure fractions gave the title compound.Accurate mass: 747.2315 (M+l)+ |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
33% | Stage #1: formaldehyd; N-benzylglycine In formic acid at 70℃; for 5h; Stage #2: trifluoroacetic acid In methanol; water | To a stirred solution of 2-(benzylamino)acetic acid (2.0 g, 12.1 mniol) in formic acid (91 mL) was added formaldehyde (6.94 mL, 93.2 mmol). After five hours at 700C, the reaction mixture was concentrated under reduced pressure to 20 mL and a white solid precipitated. Following filtration, the mother liquors were collected and further concentrated under reduced pressure providing the crude product. Purification by reverse-phase preparative HPLC (XTERRA 30 X 100 mm, detection at 220 ran, flow rate 35 mL/min, 0 to 35% B over 8 min; A= 90% water, 10 % methanol, 0.1% TFA, B=I 0% water, 90 % methanol, 0.1% TFA) provided the title compound 2- (benzyl(methyl)-amino)acetic acid as its TFA salt (723 mg, 33%) as a colorless wax. 1H NMR (300 MHz, DMSOd6) δ ppm 2.75 (s, 3H) 4.04 (s, 2H) 4.34 (s, 2H) 7.29- 7.68 (m, SH). LCMS: Anal. Calcd. for: C10H13NO2 179.09; Found: 180.20 (M+H)÷. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With hydrogenchloride In water; acetic acid for 5h; Reflux; | Phosphinomethylation of a secondary amino acid. General procedure: A phosphinic acid (3.0 mmol) and a secondary amino acid (6.0 mmol) were dissolved in a hot H2O/AcOH/HClconcd mixture (10:10:0.5 mL). Formaldehyde (36-38% aqueous solution, 30.0 mmol, 3.0 mL) was added dropwise to the stirred solution. After addition, the mixture was refluxed for 5-6 h and then cooled to room temperature. The precipitated solid was filtered and dried in the air. The benzyloxycarbonyl protection was removed as described above. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
88% | Stage #1: 1-benzyl-1H-pyrrole-2,5-dione; N-benzylglycine In toluene at 105℃; Large scale reaction; Stage #2: With formaldehyd; water In toluene at 105℃; Large scale reaction; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
33% | Stage #1: formaldehyd; formic acid; N-benzylglycine at 70℃; for 5h; Stage #2: trifluoroacetic acid In methanol; water | cap-49[00180] To a stirred solution of 2-(benzylamino)acetic acid (2.0 g, 12.1 mmol) in formic acid (91 mL) was added formaldehyde (6.94 mL, 93.2 mmol). After five hours at 70 °C, the reaction mixture was concentrated under reduced pressure to 20 mL and a white solid precipitated. Following filtration, the mother liquors were collected and further concentrated under reduced pressure providing the crude product. Purification by reverse-phase preparative HPLC (XTERRA 30 X 100 mm, detection at 220 nm, flow rate 35 mL/min, 0 to 35% B over 8 min; A= 90% water, 10 % methanol, 0.1% TFA, B= 10% water, 90 % methanol, 0.1% TFA) provided the title compound 2-(benzyl(methyl)-amino)acetic acid as its TFA salt (723 mg, 33%) as a colorless wax. 1H NMR (300 MHz, DMSO-d6) δ ppm 2.75 (s, 3H) 4.04 (s, 2H) 4.34 (s, 2H) 7.29-7.68 (m, 5H). LC-MS: Anal. Calcd. for: C10H13NO2 179.09; found: 180.20 (M+H)+. -50 |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
96% | In butan-1-ol at 200℃; for 0.166667h; Microwave irradiation; regioselective reaction; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
79% | In methanol at 100℃; for 0.333333h; Microwave irradiation; Green chemistry; stereoselective reaction; | |
for 0.25h; Microwave irradiation; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
75% | In methanol at 100℃; for 0.333333h; Microwave irradiation; Green chemistry; stereoselective reaction; | |
for 0.25h; Microwave irradiation; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
82% | In methanol at 100℃; for 0.25h; Microwave irradiation; Green chemistry; stereoselective reaction; | |
for 0.25h; Microwave irradiation; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
84% | In methanol at 100℃; for 0.25h; Microwave irradiation; Green chemistry; stereoselective reaction; | |
for 0.25h; Microwave irradiation; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
80% | In methanol at 100℃; for 0.25h; Microwave irradiation; Green chemistry; stereoselective reaction; | |
for 0.25h; Microwave irradiation; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
81% | In methanol at 100℃; for 0.25h; Microwave irradiation; Green chemistry; stereoselective reaction; | |
for 0.25h; Microwave irradiation; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
78% | In methanol at 100℃; for 0.25h; Microwave irradiation; Green chemistry; stereoselective reaction; | |
for 0.25h; Microwave irradiation; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
79% | In methanol at 100℃; for 0.25h; Microwave irradiation; Green chemistry; stereoselective reaction; | |
for 0.25h; Microwave irradiation; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
In dimethyl sulfoxide; at 157℃; for 2h; | General procedure: 6-Methoxy-1H-benzo[d][1,3]oxazine-2,4-dione (20.8 g, 108 mmol) was suspended in DMSO (55 mL). The mixture was then placed on a preheated mantle (157 C). The mixture was stirred until dissolved. Sarcosine (32.0 g, 108 mmol) was added portionwise. Almost immediately effervescence was observed. The mixture was heated for 2 h then cooled to ca. 70 C then poured into water (300 mL). A suspension of a white powder formed which was collected by filtration and dried in vacuo (13.9 g, 59%). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
82% | With 3-butyl-1-methyl-1H-imidazol-3-ium hexafluorophosphate at 100℃; Inert atmosphere; | General procedure for the synthesis of fused tetracyclic quinolines using ionic liquids General procedure: A mixture of 5-chloro-7-formyl-O-allyl-8-hydroxy quinoline 3a(1 mmol, 247 mg), sarcosine 4a (1.2 mmol, 107 mg) and ionic liquid [bmim]PF6 (5 mL) was taken in a round bottom flask under nitrogen atmosphere. The contents of the flask were stirred magnetically at 100 ± 2°C. The progress of the reaction was monitored by TLC in pet. ether-ethyl acetate (5:5) and visualization was accomplished in an iodine chamber. After completion of the reaction, the contents were neutralized with 10% aqueous sodium bicarbonate solution and extracted with ethyl acetate (3 10 mL). The solvent was removed under reduced pressure. The pasty mass thus obtained was extracted with diethyl ether (3 10 mL); the extract was dried over an hydrous sodium sulfate, and ether was distilled. The product was purified by column chromatography followed by crystallization with chloroform-hexane. The ionic layer was washed with water (3 5 mL) and kept for 2 h at80-85°C under reduced pressure for recycling. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
76% | With triethylamine In N,N-dimethyl-formamide at 100℃; for 6h; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
100% | With formaldehyd In 1,4-dioxane; benzene for 3h; Reflux; Dean-Stark; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
30% | With triethylamine In toluene at 115℃; for 24h; Molecular sieve; | (3aR,4S,5R,5aR,8bR)-6-benzyl-5-(3,4-dimethoxyphenyl)-4-(methoxymethoxy)-2,2-dimethyl-3a,5,5a,6,7,8b-hexahydro-4H-[1,3]dioxolo[4,5-e]indole (14). To a mixture of N-Bn-glycine (82 mg, 0.49 mmol), TEA (87 μL, 0.63 mmol) and 4 Å molecular sieves in toluene (1.5 mL) was added 13 (47 mg, 0.12 mmol) dissolved in 0.5 mL toluene. The mixture was stirred at 115°C for 24h, cooled to room temperature and was added water. The aqueous layer was extracted with CH2Cl2, dried over Na2SO4 and concentrated. The crude residue was purified by flash column chromatography (PE-EtOAc, 8:1) to afford 14 (18 mg, 30%) as a white solid. [α]25D= -16 (c = 1.0, CHCl3); 1H NMR (400 MHz, CDCl3)δ 7.25 -7.07 (m, 5H), 7.04 -6.76 (m, 3H), 5.59 (s, 1H, H-3), 4.86 (d, J=6.9 Hz, 1H, -CH2), 4.26 (d, J= 6.9 Hz, 1H, -CH2),4.13 (m, 2H, H-4, H-6), 3.89 -3.80 (m, 7H, -CH3, H-7a), 3.74 -3.66(m, 1H), 3.60(t, J= 9.4 Hz, 1H, H-5), 3.25 (d, J= 14.5 Hz, 1H),3.20 (d, J= 13.5 Hz, 1H), 3.10 (d, J= 13.1 Hz, 1H), 2.78 (t, J=9.9 Hz, 1H, H-7), 2.72 (s, 3H), 1.50 (s, 3H), 1.48 (s, 3H).13C NMR (100 MHz, CDCl3) δ 158.55, 149.38, 148.42, 140.14, 131.07, 129.55, 119.92,113.54, 111.76, 79.47, 77.20, 74.16, 72.26, 71.28, 60.71, 59.24, 55.92, 55.87,55.2, 29.68; HR ESI MS m/z Calcd forC28H36NO6 ([M+H]+) 482.25371, found 482.25364. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
72% | With triethylamine In tetrahydrofuran; water at 0 - 20℃; for 4h; | Synthesis of 2-nitrobenzamide-aminoacid derivatives 15. General procedure: To a solution of commercially available N-benzylglycine14a, N-benzyl-L-alanine 14b, N-benzyl-L-valine 14c or N-benzyl-L-phenylalanine 14d3 (6.06 mmol) and Et3N (2.2 mL, 15.15 mmol) in a mixture of THF (10mL) and H2O (10 mL) was added 2-nitrobenzoyl chloride (1.35 g, 7.27 mmol) at 0 °C and the resulting mixture was allowed to stir at room temperature for 4 h. The reaction mixture was evaporated to remove THF, the aqueous residue was acidified (pH ~2) with con. HCl, and extracted with 10% MeOH/CHCl3.The organic extract was washed with brine, dried with anhydrousMgSO4 and concentrated. The crude compound was purified by trituration with CHCl3/n-pentane to give the protected β-ketomethyl esters 15a-d. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
33% | Stage #1: formaldehyd; N-benzylglycine With formic acid at 70℃; for 5h; Stage #2: trifluoroacetic acid In methanol; water | Cap-49 To a stirred solution of 2-(benzylamino)acetic acid (2.0 g, 12.1 mmol) in formic acid (91 mL) was added formaldehyde(6.94 mL, 93.2 mmol). After five hours at 70 °C, the reaction mixture was concentrated under reducedpressure to 20 mL and a white solid precipitated. Following filtration, the mother liquors were collected and furtherconcentrated under reduced pressure providing the crude product. Purification by reverse-phase preparative HPLC(Xterra 30 X 100 mm, detection at 220 nm, flow rate 35 mL/min, 0 to 35% B over 8 min; A= 90% water, 10 % methanol,0.1 % TFA, B=10% water, 90 % methanol, 0.1% TFA) provided the title compound 2-(benzyl(methyl)-amino)acetic acidas its TFA salt (723 mg, 33%) as a colorless wax. 1H NMR (300 MHz, DMSO-d6) δ ppm 2.75 (s, 3H) 4.04 (s, 2H) 4.34(s, 2H) 7.29-7.68 (m, 5H). LCMS: Anal. Calcd. for: C10H13NO2 179.09; Found: 180.20 (M+H)+. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
21% | With O-(1H-benzotriazol-1-yl)-N,N,N',N'-tetramethyluronium hexafluorophosphate; N-ethyl-N,N-diisopropylamine In N,N-dimethyl-formamide at 20℃; | 30.1 Step 1: Preparation of 2-(benzylamino)- 1-(4-(3-(3,4-dimethoxyphenyl)- 1,2,4-oxadiazol-5-yI)piperidin- 1-yI)ethanone. To a stirred solution of 3-(3,4-dimethoxyphenyl)-5-(4-piperidyl)-1 ,2,4-oxadiazole (1 50 mg, 518 imol) in N,N-dimethylformamide (1 .50 mL) were added (2-(1 H-benzotriazol-1 -yl)-l ,1 3,3- tetramethyluronium hexafluorophosphate) (196 mg, 518 imol), N-ethyl-N-(propan-2-yl)propan-2-amine(201 mg, 1.56 mmol, 271 iL), and 2-(benzylamino)acetic acid (89 mg, 544 imol). The mixture wasstirred at 20 °C for 16 h and filtered, and the crude filtrate was purified directly by prep-HPLC (column:Luna 08 100x30 Slim; mobile phase: [water (10mM ammonium carbonate)-acetonitrile]; B%: 30%-60%,1 2 mm) to give 2-(benzylamino)-1 -[4-[3-(3,4-dimethoxyphenyl)-1 ,2,4-oxadiazol-5-yl]-1 -piperidyl]ethanone (48 mg, 110 limol, 21 %) as a yellow solid. 1 NMR (400MHz, METHANOL-d4) O7.65 (dd, J1 .8, 8.2 Hz, 1 H), 7.57 (d, J1 .8 Hz, 1 H), 7.40 - 7.30 (m, 4H), 7.28 - 7.22 (m, 1 H), 7.06 (d,J8.4 Hz, 1 H), 4.45 (br d, J1 3.7 Hz, 1 H), 3.94 - 3.83 (m, 7H), 3.78 (s, 2H), 3.57 - 3.44 (m, 2H), 3.40 - 3.33 (m, 1 H), 3.27 - 3.20 (m, 1 H), 3.01 (t, J1 1.2 Hz, 1 H), 2.17 (dd, J2.8, 13.3 Hz, 2H), 1.93 - 1.73 (m, 2H); LCMS (ESI) m/z: [M÷H] 437.3. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
63% | With triethylamine In ethyl acetate for 4.67h; | 16 Example 16: Synthesis of the compound of formula (II) in which Ri is Ethyl and R2 is Hydrogen, i.e. compound (ll-a) To a solution of triphosgene (3.6g, 0.4eq) in ethyl acetate (i.e. EtOAc) (200ml, 40V) was added N-Benzyl glycine (5g, 1 eq). Then a solution of triethylamine (3.37g, 1 .1 eq) in EtOAc (50ml, 10V) was added dropwise over a period of 40 min, and the mixture was stirred for another 4 h. The obtained reaction mixture was filtered and concentrate under vacuum to give the compound of formula (X-a) 3.64g, yield 63%, HPLC purity 96.43%. It was dissolved in CH2CI2 (i.e. DCM) (25ml, 5V), reserved. In a 50 ml glass reactor, was charged compound (III) (wherein R1 is ethyl, 3.5g, 0.7eq), triethylamine (4.29g, 1 .4eq) and CH2CI2 (25ml, 5V). the obtained solution was added dropwise to the DCM solution of compound of formula (X-a). After adding, the mixture was stirred for 7 h. Then water (50ml, 10V) was charged and the phase was separated. The organic layer was extracted with 2N aqueous HCI (20mlx2, 8V). The aqueous phase was adjusted to pH 8 with sodium bicarbonate. Then the obtained solution was extracted with DCM (25mlx2, 10V). The aqueous phase was concentrated under reduced pressure to obtain compound (II) (in which Ri is Ethyl) 2.17g, yield 41 .3%, GC purity 60%. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
100% | In 1,4-dioxane; benzene for 3h; Dean-Stark; Reflux; | 1.1.2. 3'-Benzyl-10H-spiro[anthracene-9,5'-oxazolidin]-10-one (2b) A mixture of anthraquinone (624 mg, 3 mmol), N-benzylglycine (570 mg, 3.45 mmol), and paraformaldehyde (158 mg, 5.26 mmol of formaldehyde) was heated at reflux in mixture of dry benzene (15 mL) and dry 1,4-dioxane (7 mL) with magnetic stirring in a 50 mL round-bottom flask fitted with a Dean-Stark trap for 3 h. The resulting mixture was cooled to rt and the solid (if necessary) was filtered off. The residual solution was evaporated under reduced pressure to give the viscous oil, which solidified at room temperature.Yellow solid (1.02 g, quantitative yield), mp 118-120 °C (ref. 1). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
74% | In toluene at 130℃; for 18h; | 1.1 Step 1. 2, 5-dibenzyl-4,4-dimethyltetrahydropyrrolo [3, 4-c] pyrrole-1, 3 (2H, 3aH) -dione The solution of 1-benzyl-1H-pyrrole-2,5-dione (23.4 g, 0.125 mol), 2- (benzylamino) acetic acid (31 g, 0.188 mol) and acetone (22 g, 0.375 mol) in touluene was stirred at 130 °C for 18 h. The precipicate after cooling to room temperature was filtered off and the filter cake was washed with EtOAc (50 mL). The filtrate was concentrated in vacuo and the crude product was purified by silica gel flash column chromatography (PE/EtOAc =5/1-3/2) to give the title compound (32.2 g, 74% yield). |
In toluene at 140℃; for 48h; | The first step Benzyl glycine 4a (7.06 g, 42.74 mmol), acetone (6.21 g, 106.85 mmol), 1-benzyl-2,5-dihydropyrrole-2,5-dione 4b (4.00 g, 21.37 mmol) and toluene (40 mL) were added into a 200 mL pot. The reaction mixture obtained was stirred at 140 °C for 48hrs. After completion of the reaction, the reaction mixture was concentrated, the crude product was purified by silica gel chromatography (PE/EtOAc = 100-0%) to give the compound 4c. 1H NMR (400 MHz, CDCl3) δ 7.40-7.32 (m, 10H), 4.77-4.72 (t, J = 5.2, 2H), 3.96-3.74 (m, 3H), 2.90-2.66 (m, 3H), 2.31 (s, 3H), 1.60 (s, 3H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
67% | In chlorobenzene at 130℃; for 5h; | 1 Example 1: Preparation method of N-benzyl-2-(4-methoxyphenyl)pyrrolidine [3',4',1,2][60]fullerene: Accurately weigh 36mg (0.05mmol) C60, 27 mg (0.20 mmol) of p-methoxybenzaldehyde and50 mg (0.30 mmol) of N-benzylglycine was added to a 100 mL thick-walled eggplant-shaped bottle. Then take 10 mL of chlorobenzene and shake it for 15 min. Dissolve C60 and aldehyde completely and mix glycine evenly. The oil bath is heated to a constant temperature of 130 ° C for 5 h. Heating was then stopped and the reactor was cooled to room temperature. The solvent is removed by rotary evaporation. The residual solid is sufficiently dissolved in a small amount of carbon disulfide and separated by column chromatography. Rinse with carbon disulfide and wash off the brown product strip. Rotating the solution by rotary evaporation gave a brownish black solid as a product. After drying under vacuum for 10 h, the yield was 67%. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
61% | In chlorobenzene at 130℃; for 5h; Sonication; | 1 Example 1:Preparation method of N-benzyl-2-(4-N,N-dimethylaminophenyl)pyrrolidine [3',4',1,2][60]fullerene: Accurately weigh 36mg (0.05mmol) C60,30 mg (0.20 mmol) of 4-N,N-dimethylaminobenzaldehyde and50 mg (0.30 mmol) of N-benzylglycine was added to100mL thick-walled eggplant-shaped bottle,Then take and add 10mL of chlorobenzene,Ultrasonic oscillation for 15 min,Allow C60 and aldehyde to dissolve completely and mix well with glycine,The oil bath is heated to a constant temperature of 130 ° C for 5 h.Heating was then stopped and the reactor was cooled to room temperature.The solvent is removed by rotary evaporation.The residual solid was sufficiently dissolved with a small amount of carbon disulfide, separated by column chromatography, washed with carbon disulfide, and the brown product strip was washed.Rotating the solution by rotary evaporation gave a brownish black solid as a product.After drying under vacuum for 10 h, the yield was 61%. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
In toluene at 130℃; for 16h; | The third step 5c (1.50 g, 7.53 mmol) and glycine 4a (2.49 g, 15.06 mmol) were dissolved in 20 mL toluene. The reaction mixture obtained was stirred at 130 °C for 16hrs. After completion of the reaction, water (10 mL) was added into the reaction mixture, then the mixture was extracted with EtOAc (15 mLx3), the organic phases were combined and wahsed with saturated brine (20 mLx1), dried over anhydrous sodium sulfate, filtered and concentrated, the crude product was purified by column chromatography (PE/EtOAc = 100-0%) to give 5d. 1H NMR (400 MHz, CDCl3) δ 7.38-7.34 (m, 2H), 7.30 (t, J = 8.0 Hz, 2H), 7.26-7.20 (m, 1H), 4.16 (d, J = 8.0 Hz, 2H), 3.97 (d, J = 4.0 Hz, 2H), 3.64-3.55 (m, 1H), 3.48-3.40 (m, 1H), 3.29 (d, J = 4.0 Hz, 1H), 3.11-2.98 (m, 2H), 2.84-2.73 (m, 1H), 2.45-2.36 (m, 1H), 1.87-1.93 (m, 1H), 1.30 (s, 6H), 1.25 (s, 3H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
57% | With hypophosphorous acid; acetic acid In water at 40℃; for 24h; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
43% | In toluene for 4h; Reflux; Inert atmosphere; | 3.2.1. General Procedure for the Synthesis of Cycloadducts 3 General procedure: A solution of porpholactone 1 (50.0 mg, 0.05 mmol), N-substituted glycine (0.45 mmol), andparaformaldehyde (33.8 mg, 1.1 mmol) in toluene (25 mL) was heated at reflux under a nitrogenatmosphere for 4 h. Then, new portions of the N-substituted glycine (0.45 mmol) and paraformaldehyde(33.8 mg, 1.1 mmol) were added, and the mixture was refluxed for additional 4 h. The solvent wasevaporated, and the compounds were separated by preparative TLC using dichloromethane/hexane asthe eluent. The compound with higher Rf corresponded to unreacted porpholactone (~10%), and thefraction running immediately below it corresponded to the expected cycloadduct. Isolated yields: 3a =85%; 3b = 43%. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
47% | With benzoic acid In benzene for 3h; Dean-Stark; Reflux; | General procedure for the synthesis of Mannich bases 13a-d General procedure: Finely ground N-substituted glycine(3 mmol), paraformaldehyde (126 mg, 4.2 mmol of formaldehyde), benzoic acid (244 mg, 2 mmol),dry benzene (12 mL) and aldehyde (2 mmol) were sequentially added in 25 mL round-bottom flaskfitted with a Dean-Stark trap and equipped with a magnetic stirring bar. The mixture was refluxed for 3h, cooled to rt, and solid was filtered off if necessary. The resulting mixture was extracted with coldaqueous solution of HCl (3.4 mmol, 10 mL). Aqueous phase was washed with ether (7 mL), basifiedwith NaHCO3 to pH 8-9. Brine (10 mL) was added to the resulting solution, and it was extracted withether (3 × 10 mL). The combined organic layers were washed with brine, dried over Na2SO4, thesolvent was removed in vacuo at rt to give the desired Mannich bases 13a-d. The latter was purified bycolumn chromatography if necessary. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
48% | With benzoic acid In benzene for 3h; Dean-Stark; Reflux; | General procedure for the synthesis of Mannich bases 13a-d General procedure: Finely ground N-substituted glycine(3 mmol), paraformaldehyde (126 mg, 4.2 mmol of formaldehyde), benzoic acid (244 mg, 2 mmol),dry benzene (12 mL) and aldehyde (2 mmol) were sequentially added in 25 mL round-bottom flaskfitted with a Dean-Stark trap and equipped with a magnetic stirring bar. The mixture was refluxed for 3h, cooled to rt, and solid was filtered off if necessary. The resulting mixture was extracted with coldaqueous solution of HCl (3.4 mmol, 10 mL). Aqueous phase was washed with ether (7 mL), basifiedwith NaHCO3 to pH 8-9. Brine (10 mL) was added to the resulting solution, and it was extracted withether (3 × 10 mL). The combined organic layers were washed with brine, dried over Na2SO4, thesolvent was removed in vacuo at rt to give the desired Mannich bases 13a-d. The latter was purified bycolumn chromatography if necessary. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
90% | With 5,6-bis(5-methoxythiophen-2-yl)pyrazine-2,3-dicarbonitrile; caesium carbonate In tetrahydrofuran; 1,2-dichloro-ethane at 30℃; for 60h; Irradiation; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
43% | In toluene at 110℃; for 16h; | Step (iv) rac-Ethyl-(3aR,6aR)-1-benzyl-4-methylhexahydropyrrolo[3,4-b]pyrrole-5(1H)-carboxylate To a stirred solution of ethyl but-3-en-2-yl-(2-oxoethyl)carbamate (4.7 g, 25.4 mmol) in toluene (100 mL) was added N-benzylglycine (CAS 17136-36-6, from Combi-blocks, 4.2 g, 25.4 mmol) at rt. The mixture was heated at 110 °C for 16 h then concentrated under reduced pressure. The residue was purified by column chromatography (basic aluminium oxide, 7% EtOAc in n-hexanes) to yield rac-ethyl (3aR,6aR)-1-benzyl-4-methylhexahydropyrrolo[3,4-b]pyrrole-5(1H)-carboxylate (3.2 g, 11.1 mmol, 43% yield). LCMS: Method C, 1.33 min, two broad peaks merged, no baseline separation of the two diastereomers, MS: ES+ 289.3. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
40 % de | In toluene at 120℃; for 18h; Dean-Stark; Overall yield = 98 percent; Overall yield = 306 g; | Step (vii) Ethyl (3aR,4R,6aR)-1-benzyl-4-methylhexahydropyrrolo[3,4-b]pyrrole-5(1H)-carboxylate, mixture with ethyl (3aS,4R,6aS)-1-benzyl-4-methylhexahydropyrrolo[3,4-b]pyrrole-5(1H)-carboxylate (~70 : 30 mixture of diastereomers) In a 10 L round-bottomed flask, equipped with Dean-Stark apparatus, a mixture of ethyl (R)-but-3-en- 2-yl-(2-oxoethyl)carbamate (200.0 g, 1079.7 mmol) in toluene (7.2 L, 36 vol) was stirred at rt. N-Benzylglycine (214.02 g, 1295.7 mmol) was added to the mixture, which was then heated at 120 °C for 18 h, allowed to cool to rt and concentrated under reduced pressure. The residue was poured in to saturated NaHCO3 solution (2000 mL) and was extracted with DCM (2 x 1000 mL). The combined organic phases were dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure to yield the subtitle compounds (~70 : 30 mixture of diastereomers) as a brown oil (306.0 g, 1061.06 mmol, 98% yield). LCMS: Method H3, 3.46 min, mixture of diastereomers, MS: ES+ 289.2; 1H NMR (400 MHz, CDCl3) δ ppm: 7.16 - 7.40 (m, 5H), 4.16 (m, 2H), 3.91 (m, 2H), 3.65 (m, 1H), 3.49 (m, 1H), 3.32 (m, 1H), 3.18 (m, 1H), 2.92 (m, 1H), 2.64 - 2.72 (m, 1H), 2.40 (s, 1H), 2.33 (m, 1H), 2.10 (m, 1H), 1.30 (t, 3H), 1.20 (d, J = 5.2 Hz, 3H); Chiral HPLC: Method Y26, 5.23 min - major peak; 5.61 min - minor peak. The method was repeated three times in an identical manner using ethyl (R)-but-3-en-2-yl-(2- oxoethyl)carbamate (515 g, 600 g and 760 g) to provide the subtitle compound (respectively 751 g, 880 g and 970 g). Combined weight of all four batches: 2907 g, 10.09 mol. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
1: 41% 2: 8% 3: 4% | In para-xylene for 2h; Reflux; regioselective reaction; | Reaction of Aldehydes 3a-d, 4, 5 with Amino Acids; General Procedure General procedure: A mixture of the corresponding aldehyde (1 mmol) and sarcosine, N-benzylglycine, pipecolinic acid, or 1,3-thiazolidine-4-carboxylic acid (each 3 mmol) in p-xylene (30 mL) was refluxed for 2 h. After cooling,the reaction mixture was filtered through a pad of Celite and concentrated. The crude product was purified by column chromatography on silica gel with MeOH-CH2Cl2 as eluent. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
63% | In para-xylene for 2h; Reflux; regioselective reaction; | Reaction of Aldehydes 3a-d, 4, 5 with Amino Acids; General Procedure General procedure: A mixture of the corresponding aldehyde (1 mmol) and sarcosine, N-benzylglycine, pipecolinic acid, or 1,3-thiazolidine-4-carboxylic acid (each 3 mmol) in p-xylene (30 mL) was refluxed for 2 h. After cooling,the reaction mixture was filtered through a pad of Celite and concentrated. The crude product was purified by column chromatography on silica gel with MeOH-CH2Cl2 as eluent. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
73% | In para-xylene for 2h; Reflux; regioselective reaction; | Reaction of Aldehydes 3a-d, 4, 5 with Amino Acids; General Procedure General procedure: A mixture of the corresponding aldehyde (1 mmol) and sarcosine, N-benzylglycine, pipecolinic acid, or 1,3-thiazolidine-4-carboxylic acid (each 3 mmol) in p-xylene (30 mL) was refluxed for 2 h. After cooling,the reaction mixture was filtered through a pad of Celite and concentrated. The crude product was purified by column chromatography on silica gel with MeOH-CH2Cl2 as eluent. |
[ 127199-27-3 ]
8-Chloro-6,7-difluoro-1-((1R,2S)-2-fluorocyclopropyl)-4-oxo-1,4-dihydroquinoline-3-carboxylic acid
[ 144282-37-1 ]
tert-Butyl (S)-(5-benzyl-5-azaspiro[2.4]heptan-7-yl)carbamate
[ 78397-15-6 ]
(R)-2-((1-Phenylethyl)amino)acetic acid
Similarity: 0.88
[ 78397-14-5 ]
(S)-2-((1-Phenylethyl)amino)acetic acid
Similarity: 0.88
[ 106910-77-4 ]
(R)-2-(Benzylamino)-3-hydroxypropanoic acid
Similarity: 0.82
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